BLASTX 7.6.2
Query= UN24399 /QuerySize=1212
(1211 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54170.1 | Symbols: CID3 | CID3 (CTC-Interacti... 304 1e-082
TAIR9_protein||AT3G14010.1 | Symbols: CID4 | CID4 (CTC-Interacti... 165 5e-041
TAIR9_protein||AT3G14010.2 | Symbols: CID4 | CID4 (CTC-Interacti... 165 5e-041
TAIR9_protein||AT3G14010.3 | Symbols: CID4 | CID4 (CTC-Interacti... 165 5e-041
>TAIR9_protein||AT1G54170.1 | Symbols: CID3 | CID3 (CTC-Interacting Domain 3) |
chr1:20221353-20224919 REVERSE
Length = 588
Score = 304 bits (776), Expect = 1e-082
Identities = 178/280 (63%), Positives = 192/280 (68%), Gaps = 34/280 (12%)
Frame = -3
Query: 1074 ESWGGG----SLASVGQSCLNSN---RQPMFEQPSKDTPAPG----SKSQFCEQRTGKSL 928
+SWG S V QS NSN RQ M E PSKD P G ++SQ EQR K L
Sbjct: 324 DSWGDSLHLRSNKMVDQSWSNSNKHTRQLMSELPSKDFPVAGNNIRNESQLGEQRKSKFL 383
Query: 927 EASHYKKPSVESVSGLEDINEDAATSDPWRTADRQSSTDGNLHSRFSDRVKPESSHWRPG 748
AS +KKPS ESVSG ED + S DG L SDR K E+S PG
Sbjct: 384 GASLFKKPSEESVSGFEDAPPPV----------KPSFIDGRL-GLLSDRAKSENSSGWPG 432
Query: 747 -----NSENSATSSAASSRPMLSPSSSIGSYSSEKSNLNPNAKEFKPNPNAKSFQPSPTT 583
NSENSA SS AS+ P+LSPSSS GS SSEKS LNPNAKEFK NPNAKSF+PSP+
Sbjct: 433 SSISRNSENSAASS-ASNLPILSPSSS-GSLSSEKSTLNPNAKEFKLNPNAKSFKPSPSA 490
Query: 582 TR---PQSPVADGSFYYPPPPPMPGIHILYGMGAAFPGQQHPMMYNNNTPQQLGPNQTYY 412
TR PQSPV DGSFYYPP PPMPG+HI YG GAAFPGQQHPMMYNN T QL PNQTYY
Sbjct: 491 TRPQSPQSPVFDGSFYYPPVPPMPGLHIRYGTGAAFPGQQHPMMYNNTT--QLSPNQTYY 548
Query: 411 SPNSPQYPQQMMVSQQRPVLFMPPSPYQPEMPYKGRDSY* 292
SPNSPQYPQ MMV+QQRP+LFMPP+PYQPEMPYKGRDSY*
Sbjct: 549 SPNSPQYPQPMMVTQQRPILFMPPTPYQPEMPYKGRDSY* 588
Score = 52 bits (123), Expect = 7e-007
Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Frame = -2
Query: 1201 DSGYE--EEEEEEILLNCRNNLTFGDSTASDGMKSTSSG 1091
D+ YE EEEEE+ILL+C NNLTFGDS+ASDG + S+G
Sbjct: 281 DTCYEDDEEEEEDILLDCCNNLTFGDSSASDGKEPASTG 319
>TAIR9_protein||AT3G14010.1 | Symbols: CID4 | CID4 (CTC-Interacting Domain 4);
protein binding | chr3:4637164-4640691 FORWARD
Length = 596
Score = 165 bits (417), Expect = 5e-041
Identities = 120/276 (43%), Positives = 146/276 (52%), Gaps = 43/276 (15%)
Frame = -3
Query: 1047 SVGQSCLNSNRQPMFEQPSKDTPAPG---SKSQFCEQRTGKSLEASHYKKPSVESVSGLE 877
+V QSC S +Q SKD PA G S+SQ EQR + E SH + + ES SG
Sbjct: 336 NVDQSCSTSKQQ------SKDFPAAGSNISESQLDEQRRKNNEEVSHNNRSAEESTSGHG 389
Query: 876 DINEDAATSDPWRTADRQSSTDGNLHSRFSDRVKPESSHWRPGN-SENSATSSAASSRPM 700
DI E A + + + + S+ S + K ESS + + S S + SSRP
Sbjct: 390 DIKEGAKSGGGASSVSKAVTEREREASQVSSKTKSESSFGQSASRSSESRPGPSTSSRPG 449
Query: 699 LSPSSSIGSY-SSEKSNLNPNAKEFKPNPNAKSFQP-SPTTTRPQSPVADGSFYYP---- 538
LSPSSSIGS SSEKS LNPNAKEFK NP AKSF+P PQSP+AD SFYYP
Sbjct: 450 LSPSSSIGSMASSEKSTLNPNAKEFKLNPKAKSFKPLQSAAAPPQSPIADASFYYPGPSH 509
Query: 537 -PPPPMPGI-HILYGMGAAFPGQQHPMMYNNNTPQQLGPNQTYYSPN-SPQYPQQMMVSQ 367
P MPG+ + YG+ +PG Q MMY+ Q YY PN PQYPQQ M+
Sbjct: 510 VPVQQMPGMPPVNYGL-PPYPGNQPQMMYH---------PQAYYHPNGQPQYPQQQMIPG 559
Query: 366 Q------------RPVLFMPPSPYQPEMPY--KGRD 301
Q RPV +M P PY +MPY KGR+
Sbjct: 560 QQQQQMIPGQQHPRPVYYMHPPPYPQDMPYHNKGRE 595
Score = 49 bits (114), Expect = 7e-006
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = -2
Query: 1210 GFGDSGYEEEEEEEILLNCRNNLTFGDSTASDGMKSTSSGNG-KGYRIMGGWQSS 1049
GFGDSG+ + E+ LL+ N+LTFG S+ SDG K SSG G + R+ G QSS
Sbjct: 279 GFGDSGF--DLEDNALLDTCNDLTFGGSSTSDGQKPASSGKGCEELRVSGDSQSS 331
>TAIR9_protein||AT3G14010.2 | Symbols: CID4 | CID4 (CTC-Interacting Domain 4);
protein binding | chr3:4637164-4640691 FORWARD
Length = 596
Score = 165 bits (417), Expect = 5e-041
Identities = 120/276 (43%), Positives = 146/276 (52%), Gaps = 43/276 (15%)
Frame = -3
Query: 1047 SVGQSCLNSNRQPMFEQPSKDTPAPG---SKSQFCEQRTGKSLEASHYKKPSVESVSGLE 877
+V QSC S +Q SKD PA G S+SQ EQR + E SH + + ES SG
Sbjct: 336 NVDQSCSTSKQQ------SKDFPAAGSNISESQLDEQRRKNNEEVSHNNRSAEESTSGHG 389
Query: 876 DINEDAATSDPWRTADRQSSTDGNLHSRFSDRVKPESSHWRPGN-SENSATSSAASSRPM 700
DI E A + + + + S+ S + K ESS + + S S + SSRP
Sbjct: 390 DIKEGAKSGGGASSVSKAVTEREREASQVSSKTKSESSFGQSASRSSESRPGPSTSSRPG 449
Query: 699 LSPSSSIGSY-SSEKSNLNPNAKEFKPNPNAKSFQP-SPTTTRPQSPVADGSFYYP---- 538
LSPSSSIGS SSEKS LNPNAKEFK NP AKSF+P PQSP+AD SFYYP
Sbjct: 450 LSPSSSIGSMASSEKSTLNPNAKEFKLNPKAKSFKPLQSAAAPPQSPIADASFYYPGPSH 509
Query: 537 -PPPPMPGI-HILYGMGAAFPGQQHPMMYNNNTPQQLGPNQTYYSPN-SPQYPQQMMVSQ 367
P MPG+ + YG+ +PG Q MMY+ Q YY PN PQYPQQ M+
Sbjct: 510 VPVQQMPGMPPVNYGL-PPYPGNQPQMMYH---------PQAYYHPNGQPQYPQQQMIPG 559
Query: 366 Q------------RPVLFMPPSPYQPEMPY--KGRD 301
Q RPV +M P PY +MPY KGR+
Sbjct: 560 QQQQQMIPGQQHPRPVYYMHPPPYPQDMPYHNKGRE 595
Score = 49 bits (114), Expect = 7e-006
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = -2
Query: 1210 GFGDSGYEEEEEEEILLNCRNNLTFGDSTASDGMKSTSSGNG-KGYRIMGGWQSS 1049
GFGDSG+ + E+ LL+ N+LTFG S+ SDG K SSG G + R+ G QSS
Sbjct: 279 GFGDSGF--DLEDNALLDTCNDLTFGGSSTSDGQKPASSGKGCEELRVSGDSQSS 331
>TAIR9_protein||AT3G14010.3 | Symbols: CID4 | CID4 (CTC-Interacting Domain 4);
protein binding | chr3:4637164-4640691 FORWARD
Length = 596
Score = 165 bits (417), Expect = 5e-041
Identities = 120/276 (43%), Positives = 146/276 (52%), Gaps = 43/276 (15%)
Frame = -3
Query: 1047 SVGQSCLNSNRQPMFEQPSKDTPAPG---SKSQFCEQRTGKSLEASHYKKPSVESVSGLE 877
+V QSC S +Q SKD PA G S+SQ EQR + E SH + + ES SG
Sbjct: 336 NVDQSCSTSKQQ------SKDFPAAGSNISESQLDEQRRKNNEEVSHNNRSAEESTSGHG 389
Query: 876 DINEDAATSDPWRTADRQSSTDGNLHSRFSDRVKPESSHWRPGN-SENSATSSAASSRPM 700
DI E A + + + + S+ S + K ESS + + S S + SSRP
Sbjct: 390 DIKEGAKSGGGASSVSKAVTEREREASQVSSKTKSESSFGQSASRSSESRPGPSTSSRPG 449
Query: 699 LSPSSSIGSY-SSEKSNLNPNAKEFKPNPNAKSFQP-SPTTTRPQSPVADGSFYYP---- 538
LSPSSSIGS SSEKS LNPNAKEFK NP AKSF+P PQSP+AD SFYYP
Sbjct: 450 LSPSSSIGSMASSEKSTLNPNAKEFKLNPKAKSFKPLQSAAAPPQSPIADASFYYPGPSH 509
Query: 537 -PPPPMPGI-HILYGMGAAFPGQQHPMMYNNNTPQQLGPNQTYYSPN-SPQYPQQMMVSQ 367
P MPG+ + YG+ +PG Q MMY+ Q YY PN PQYPQQ M+
Sbjct: 510 VPVQQMPGMPPVNYGL-PPYPGNQPQMMYH---------PQAYYHPNGQPQYPQQQMIPG 559
Query: 366 Q------------RPVLFMPPSPYQPEMPY--KGRD 301
Q RPV +M P PY +MPY KGR+
Sbjct: 560 QQQQQMIPGQQHPRPVYYMHPPPYPQDMPYHNKGRE 595
Score = 49 bits (114), Expect = 7e-006
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = -2
Query: 1210 GFGDSGYEEEEEEEILLNCRNNLTFGDSTASDGMKSTSSGNG-KGYRIMGGWQSS 1049
GFGDSG+ + E+ LL+ N+LTFG S+ SDG K SSG G + R+ G QSS
Sbjct: 279 GFGDSGF--DLEDNALLDTCNDLTFGGSSTSDGQKPASSGKGCEELRVSGDSQSS 331
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,489,607,285
Number of Sequences: 33410
Number of Extensions: 12489607285
Number of Successful Extensions: 397281130
Number of sequences better than 0.0: 0
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