BLASTX 7.6.2
Query= UN24608 /QuerySize=1308
(1307 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G52500.2 | Symbols: FPG-1, ATFPG-1, ATMMH-1 | ... 592 2e-169
TAIR9_protein||AT1G52500.1 | Symbols: FPG-2, ATFPG-2, ATMMH-2, M... 480 1e-135
TAIR9_protein||AT1G12830.1 | Symbols: | unknown protein | chr1:... 49 5e-006
TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant ... 49 6e-006
TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase fami... 49 6e-006
>TAIR9_protein||AT1G52500.2 | Symbols: FPG-1, ATFPG-1, ATMMH-1 | ATMMH-1
(ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase |
chr1:19560043-19562855 FORWARD
Length = 391
Score = 592 bits (1525), Expect = 2e-169
Identities = 314/389 (80%), Positives = 338/389 (86%), Gaps = 26/389 (6%)
Frame = +3
Query: 75 MPELPEVEAARRAIEDNCLGKKINRVIIADDNKVIDGISPSDFQNSILGKTIVSARRKGK 254
MPELPEVEAARRAIE+NCLGKKI RVIIADDNKVI GISPSDFQ SILGKTI+SARRKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 255 NLWLELDSPPFPSFQFGMAGAVSIKGVAVTKYKRSAVKESEEWPSKYSKFFVELDDGLEL 434
NLWLELDSPPFPSFQFGMAGA+ IKGVAVTKYKRSAVK+SEEWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 435 SFTDKRRFAKVRLLDNPVSVRPISELGPDALLEPMTVDEFAKRLAKKKITIKPLLLDQGL 614
SFTDKRRFAKVRLL NP SV PISELGPDALLEPMTVDEFA+ LAKKKITIKPLLLDQG
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 615 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIKHAVQVSADSKEFPVEW 794
ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVI+ AV+V ADS +FP W
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSYW 240
Query: 795 LFHFRWGKKPGK--VNGKKIDFITAGGRTTAYVPELQKLFGKDAEKAAKAKPAKRGAKSK 968
+FH R KKPGK V+GKKIDFITAGGRTTAYVPELQKL+GKDAEKAAK +PAKRG K K
Sbjct: 241 IFHNR-EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAAKVRPAKRGVKPK 299
Query: 969 EDD----------EEEDDSAK-PRNQKPK-GRGKKPALKRKTKDSEDEDDDDDDDDDGGE 1112
EDD E+ED+SAK + QKP+ GRGKKPA K KT++S DDDG
Sbjct: 300 EDDGDGEEDEQETEKEDESAKSKKGQKPRGGRGKKPASKTKTEES---------DDDG-- 348
Query: 1113 DDSDAEEQVIKPRGRGSKAAIKKKPEEKA 1199
DDS+AEE+V+KP+GRG+K AIK+K EEKA
Sbjct: 349 DDSEAEEEVVKPKGRGTKPAIKRKSEEKA 377
>TAIR9_protein||AT1G52500.1 | Symbols: FPG-2, ATFPG-2, ATMMH-2, MMH-2 | ATMMH-1
(ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase |
chr1:19560043-19562055 FORWARD
Length = 275
Score = 480 bits (1233), Expect = 1e-135
Identities = 239/256 (93%), Positives = 246/256 (96%)
Frame = +3
Query: 75 MPELPEVEAARRAIEDNCLGKKINRVIIADDNKVIDGISPSDFQNSILGKTIVSARRKGK 254
MPELPEVEAARRAIE+NCLGKKI RVIIADDNKVI GISPSDFQ SILGKTI+SARRKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 255 NLWLELDSPPFPSFQFGMAGAVSIKGVAVTKYKRSAVKESEEWPSKYSKFFVELDDGLEL 434
NLWLELDSPPFPSFQFGMAGA+ IKGVAVTKYKRSAVK+SEEWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 435 SFTDKRRFAKVRLLDNPVSVRPISELGPDALLEPMTVDEFAKRLAKKKITIKPLLLDQGL 614
SFTDKRRFAKVRLL NP SV PISELGPDALLEPMTVDEFA+ LAKKKITIKPLLLDQG
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 615 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIKHAVQVSADSKEFPVEW 794
ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVI+HAVQV+ADSKEFPVEW
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIQHAVQVNADSKEFPVEW 240
Query: 795 LFHFRWGKKPGKVNGK 842
LFHFRWGKK GKVNGK
Sbjct: 241 LFHFRWGKKAGKVNGK 256
>TAIR9_protein||AT1G12830.1 | Symbols: | unknown protein | chr1:4374412-4375053
REVERSE
Length = 214
Score = 49 bits (116), Expect = 5e-006
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +3
Query: 966 KEDDEEEDDSAKPRNQKPKGRGKKPALKRK---TKDSEDEDDDDDDDDDGGEDDSDAEE 1133
+EDDEEE++ + ++K KG ++ K K ++S+DEDD DDD+DD G D+ D +
Sbjct: 104 EEDDEEEEEEEEVVDRKGKGISREDKGKGKMIEVEESDDEDDSDDDEDDEGFDEDDESD 162
>TAIR9_protein||AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis
thaliana protein match is: EMB2758 (embryo defective 2758)
(TAIR:AT4G33990.1); Has 45368 Blast hits to 16108 proteins in 635
species: Archae - 60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967 (source: NCBI
BLink). | chr3:18212187-18217848 REVERSE
Length = 1216
Score = 49 bits (115), Expect = 6e-006
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +3
Query: 963 SKEDDEEEDDSAKPRNQKPKGRGKKPALKRKTKDSEDEDDDDDDDDDGGEDDSDAEEQV 1139
S D E EDD + + + G + + EDEDDDDDDDDD +DDSD++E +
Sbjct: 921 SDSDFETEDDESGDDDSEDTGEDEDEEEWVAILEDEDEDDDDDDDDDEDDDDSDSDESL 979
>TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase family protein |
chr5:4908686-4910670 FORWARD
Length = 491
Score = 49 bits (115), Expect = 6e-006
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +3
Query: 960 KSKEDDEEEDDSAKPRNQKPKGRGKKPALKRKTKDSEDEDDDDDDDDDGGEDDSDAEE 1133
KS D+++DD K +++K G T D +D+DDDDDDDD+ DD++ E+
Sbjct: 102 KSGGHDKDDDDEKKHKDKKKDGHNDDDDSDDDTDDDDDDDDDDDDDDEVDGDDNEKEK 159
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,631,021,863
Number of Sequences: 33410
Number of Extensions: 12631021863
Number of Successful Extensions: 405166839
Number of sequences better than 0.0: 0
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