BLASTX 7.6.2
Query= UN24659 /QuerySize=1307
(1306 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis ... 354 2e-095
gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis ... 314 3e-083
gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containi... 295 1e-077
gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis ... 291 2e-076
gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidops... 278 2e-072
gi|297807065|ref|XP_002871416.1| hypothetical protein ARALYDRAFT... 275 1e-071
gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis ... 270 6e-070
gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidops... 241 3e-061
gi|15220334|ref|NP_172594.1| F-box and associated interaction do... 231 3e-058
gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana] 223 5e-056
gi|15238138|ref|NP_196596.1| F-box protein [Arabidopsis thaliana] 223 6e-056
gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis ... 192 1e-046
gi|297849494|ref|XP_002892628.1| predicted protein [Arabidopsis ... 180 5e-043
gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis ... 166 7e-039
gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana] 162 1e-037
gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis tha... 159 1e-036
gi|3859605|gb|AAC72871.1| T15B16.15 gene product [Arabidopsis th... 156 1e-035
gi|15234258|ref|NP_192073.1| F-box associated ubiquitination eff... 156 1e-035
gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis ... 144 3e-032
gi|297849770|ref|XP_002892766.1| predicted protein [Arabidopsis ... 143 9e-032
>gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 354 bits (907), Expect = 2e-095
Identities = 201/373 (53%), Positives = 241/373 (64%), Gaps = 20/373 (5%)
Frame = -3
Query: 1160 EEVLPHDVVELILEKLPVVSLLRFKRVSKTWKSTIESPSFKQRQVVMITRKSRGPDILYV 981
EE+LPHDV+ELILE+LPV +LL F+ VSK WKSTI+S FK+R+ + R SRG +L++
Sbjct: 11 EELLPHDVIELILERLPVQALLVFRSVSKKWKSTIDSRRFKERR-LQRRRHSRGVYVLFL 69
Query: 980 TWLGDEEEEEEILEEEAN--IMVGSCVIRSLKFPTRNDKVCYGACDGLVCFFGNRNPSVV 807
G E L+ + N GS V R+ + P CYG+CDG+VC +G PS+V
Sbjct: 70 CVNG-----ENTLKRDDNRVFSFGSSVARTGRIPNSGPLFCYGSCDGIVCLYGIHTPSIV 124
Query: 806 FNPATRWRRSFLHSRVQPRIISDARARKKRGCYTREPQLGFGKDKVRSTYKPVWLFNSSE 627
NPAT W ++F Q I K+ P+LG GKDK+ TYKPVWL+NSS
Sbjct: 125 VNPATGWYQNFPLCNYQQLYIP---RFDKKDVNFPSPKLGLGKDKLTGTYKPVWLYNSSI 181
Query: 626 FGLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLH 447
FGL+N TTCE+FDFTTNAWRYV+ ASPY+I KPVY GSLYW T+C E K+LS DLH
Sbjct: 182 FGLENATTCELFDFTTNAWRYVVLASPYQINAYHKPVYLDGSLYWFTDCEEPKVLSLDLH 241
Query: 446 TETFQVICNAPFSHVPDPRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQMC 267
TETFQVIC APF+H DPR L +CILDNRLCVS K +P TQVIWS S TW QMC
Sbjct: 242 TETFQVICKAPFAHPCDPRQLTMCILDNRLCVSEKKWP--TQVIWSFHPSG--KTWNQMC 297
Query: 266 SIDLTKT-CFLDLPYFPDPALLPIAIVDETKLLL-GYSCGSPLVIHDLHTNSYVFYSFPK 93
IDLT+T + +P F AL PIAI+D+ KLLL G LVIHDLHT SY F P
Sbjct: 298 CIDLTQTFSWFGVPKF---ALSPIAIMDKGKLLLQGRDTSHALVIHDLHTKSYEFLFKPS 354
Query: 92 MLDYPVRYFPSLF 54
V YF SLF
Sbjct: 355 RPVGSVYYFESLF 367
>gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 314 bits (803), Expect = 3e-083
Identities = 183/359 (50%), Positives = 236/359 (65%), Gaps = 27/359 (7%)
Frame = -3
Query: 1178 LKRHRGEEV---LPHDVVELILEKLPVVSLLRFKRVSKTWKSTIESPSFKQRQVVMITRK 1008
LKRHR V LPHD VELILE+LPV SLL+FK VSK WKSTIES FK+RQ++ ++
Sbjct: 14 LKRHRSSVVGLLLPHDAVELILERLPVESLLKFKSVSKNWKSTIESRCFKERQLIR-RKQ 72
Query: 1007 SRGPDILYV--TWLGDEEEEEEILEEEANIMVGSCVIRSLKFPTRN-DKVCYGACDGLVC 837
SRGPD+L V TW D E +I +GS ++ +++ PT + ++C+G+CDGL+C
Sbjct: 73 SRGPDVLLVPLTWSCDGIYAE-------SIALGSSIVSTVRLPTSSGSRICHGSCDGLLC 125
Query: 836 FFGNRNPSVVFNPATRWRRSFLHSRVQPRIISDARARKKRGCYTREPQLGFGKDKVRSTY 657
+ PSVV NPAT W ++F S +Q + D + + + P LGFG+DK TY
Sbjct: 126 LYCVYTPSVVVNPATGWHQTFPLSNLQ-LLCLDMYDKPEDHDFFPMPNLGFGRDKFTGTY 184
Query: 656 KPVWLFNSSEFGLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTEC- 480
KPVWL+NSS+FGL N TTCEVFDF+TN WRYV P+ P+RI + PVY GSL+WL E
Sbjct: 185 KPVWLYNSSDFGLPNATTCEVFDFSTNTWRYVHPSPPHRIDDFINPVYLDGSLHWLAEGE 244
Query: 479 VETKLLSFDLHTETFQVICNAPFSHVPDPRFLLLCILDNRLCVSLKIYPTSTQVIWSLDS 300
ETK+LSFDLH+ETF V+C APF+ P + ILDNRLCVS + +STQVIWS S
Sbjct: 245 EETKVLSFDLHSETFHVLCKAPFARDHFPFSHNMFILDNRLCVSEQ--DSSTQVIWSFHS 302
Query: 299 S--NMPTTWKQMCSIDLTKT--CFLDLPYFPDPALLPIAIVDETKLLL-GYSCGSPLVI 138
S N TW ++CSID+T+T F+D+ + L PIAI+D+ KLLL G C L I
Sbjct: 303 SGGNKNKTWNKLCSIDVTRTRSWFIDINF----PLAPIAILDKNKLLLQGRHCVGDLRI 357
>gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containing protein
[Arabidopsis thaliana]
Length = 382
Score = 295 bits (755), Expect = 1e-077
Identities = 186/384 (48%), Positives = 230/384 (59%), Gaps = 29/384 (7%)
Frame = -3
Query: 1157 EVLPHDVVELILEKLPVVSLLRFKRVSKTWKSTIESPSFKQRQVVMITRKSRGPDILYVT 978
E LPH+VVE ILE+L LLRFK VSK WKSTIESP F++RQ ++S PD+L V+
Sbjct: 11 ESLPHEVVECILERLDADPLLRFKAVSKQWKSTIESPFFQRRQFTQ-RQQSGNPDVLMVS 69
Query: 977 WLGDEEEEEEILEEEANIMVGSCVIRSLKFPT------RNDK---VCYGACDGLVCFFGN 825
D E E L +++GS S+K PT DK V +CDGLVC F
Sbjct: 70 RCADINSEIEAL---TTLVLGSS--SSVKIPTPWEEEEEEDKEYSVSQDSCDGLVCLFDK 124
Query: 824 RNPSVVFNPATRWRRSFLHSRVQPRIISDARARKKRGCYTREPQLGFGKDKVRSTYKPVW 645
VFNPATRW ++Q +I+ G R +LGFGKDK+ TYKPVW
Sbjct: 125 FKSGFVFNPATRWYHPLPLCQLQQLLIAIGDGFYDLG--YRVSRLGFGKDKLTGTYKPVW 182
Query: 644 LFNSSEFGLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKL 465
L+NS E GL+N TTCEVFDF+TNAWRYV PA+PYRI+ PV GSL+W TEC ETK+
Sbjct: 183 LYNSIEIGLENATTCEVFDFSTNAWRYVSPAAPYRIVGCPAPVCVDGSLHWFTECEETKI 242
Query: 464 LSFDLHTETFQVICNAPFSHVPDPRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPT 285
LSFDLHTETFQV+ APF++V D +++C LDNRLCVS P QVIWS +S N
Sbjct: 243 LSFDLHTETFQVVSKAPFANV-DGFDIVMCNLDNRLCVSEMKLP--NQVIWSFNSGN--K 297
Query: 284 TWKQMCSIDLTKTCFLDLPYFPDPALLPIAIVD----ETKLLLGYS--CGSPLVIHDLHT 123
TW +MCSI+L T P A+LP+A++D + K LL Y +V+HD T
Sbjct: 298 TWHKMCSINLDITSRWFGP-TQVCAVLPLALLDGKKKKKKKLLFYCRVRKRTMVVHDDET 356
Query: 122 NSYVFYSFPKMLDYPVRYFPSLFS 51
SY + +PV YFPSL S
Sbjct: 357 KSYDVAFEADSIGHPVCYFPSLIS 380
>gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 291 bits (744), Expect = 2e-076
Identities = 157/293 (53%), Positives = 192/293 (65%), Gaps = 7/293 (2%)
Frame = -3
Query: 926 IMVGSCVIRSLKFPTRNDKVCYGACDGLVCFFGNRNPSVVFNPATRWRRSFLHSRVQPRI 747
I++GS ++ +++FPT C+G+CDGL+C + +PS V NPATRW +SF S + I
Sbjct: 99 IVLGSSIVSTVRFPTSCTVFCHGSCDGLLCLYSLNDPSFVVNPATRWHQSFPLSSYRELI 158
Query: 746 ISDARARKKRGCYTREPQLGFGKDKVRSTYKPVWLFNSSEFGLDNVTTCEVFDFTTNAWR 567
R + K +LGFG+DKVR TYKPVWL+NSSE+GL+N+TTCEVFDF+TNAWR
Sbjct: 159 FD--RLKIKGALDITCAKLGFGRDKVRGTYKPVWLYNSSEYGLENITTCEVFDFSTNAWR 216
Query: 566 YVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLHTETFQVICNAPFSHVPDPRF 387
++ AS YRI+ PVY GSLYW TEC ETK+LSFDLHTETFQVI PF HV DP
Sbjct: 217 FLHQASLYRILGDHYPVYLDGSLYWFTECEETKVLSFDLHTETFQVISKTPFPHVLDPLG 276
Query: 386 LLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQMCSIDLTKTCFLDLPYFPDPAL 207
+CILDNRLCVS +P TQVIWS DSS WK++CSIDLT+T + L L
Sbjct: 277 FTMCILDNRLCVSETNWP--TQVIWSFDSSGGMEPWKKLCSIDLTET--ISLYGKAVSRL 332
Query: 206 LPIAIVDETKLLL-GYSCGSPLVIHDLHTNSYVFYSFPKMLDYPVRYFPSLFS 51
PIAI+D+TKLLL S P VI+DL T SY P Y SLFS
Sbjct: 333 FPIAILDKTKLLLHSRSYLQPAVIYDLQTKSYGVLFTPTTRGSSAFYSQSLFS 385
>gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 309
Score = 278 bits (710), Expect = 2e-072
Identities = 142/257 (55%), Positives = 179/257 (69%), Gaps = 6/257 (2%)
Frame = -3
Query: 1043 FKQRQVVMITRKSRGPDILYVTWLGDEEEEEEILEEEANIMVGSCVIRSLKFPTRNDKVC 864
FK + ++ +SRGPD+L V++ D ++E E I+ GS ++ + +FPT N +C
Sbjct: 53 FKSERQLIRRMQSRGPDVLVVSFADDNNGDDEATTER-RIVFGSSIVSTFRFPTWNTLLC 111
Query: 863 YGACDGLVCFFGNRNPSVVFNPATRWRRSFLHSRVQPRIISDARARKKRGCYTREPQLGF 684
YG+CDGLVC + +P++V NPAT+W RS S +Q +I K+ C +P+LGF
Sbjct: 112 YGSCDGLVCIYCFYSPNIVVNPATKWHRSCPLSNLQQFLID---KYDKQECDFPDPKLGF 168
Query: 683 GKDKVRSTYKPVWLFNSSEFGLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHG 504
GKDK++ T+K VWL+NSSEFGLDNVTTCEVFDF+TNAWRYV PASPYRI + Q PVYF G
Sbjct: 169 GKDKLKGTFKQVWLYNSSEFGLDNVTTCEVFDFSTNAWRYVHPASPYRINDYQDPVYFDG 228
Query: 503 SLYWLTECVETKLLSFDLHTETFQVICNAPFSHVPDPRFLLLCILDNRLCVSLKIYPTST 324
SL+WLTE E K+LSFDLHTETFQVIC APF DP +CILDNRLCVS S
Sbjct: 229 SLHWLTEGKECKILSFDLHTETFQVICKAPFLCERDPVGDTMCILDNRLCVS--EINGSA 286
Query: 323 QVIWSLDSSNMPTTWKQ 273
Q+IWSLDSS TWK+
Sbjct: 287 QLIWSLDSSGGNKTWKK 303
>gi|297807065|ref|XP_002871416.1| hypothetical protein ARALYDRAFT_487863
[Arabidopsis lyrata subsp. lyrata]
Length = 378
Score = 275 bits (702), Expect = 1e-071
Identities = 174/384 (45%), Positives = 228/384 (59%), Gaps = 23/384 (5%)
Frame = -3
Query: 1160 EEVLPHDVVEL-ILEKLPVVSLLRFKRVSKTWKSTIESPSFKQRQVVMITRKSRGPDILY 984
EE+LPHDV+E ILE+L V +LL+FK VSK W STI+SP F++RQ++ +S G +
Sbjct: 2 EELLPHDVIEFHILERLDVKTLLKFKSVSKQWISTIQSPCFQERQLIHHLSQSPGDPHVL 61
Query: 983 VTWLGD--EEEEEEILEEEANIMVGSCVIRSLKFPTR-NDK---VCYGACDGLVCFFG-N 825
+ L D +++ E + VGS S++ PT DK VC +CDGL+C +
Sbjct: 62 LVSLSDPSARQQDPSFEALRTLEVGSS-SASVQIPTPWEDKLYDVCNTSCDGLICLYDFY 120
Query: 824 RNPSVVFNPATRWRRSFLHSRVQPRIISDARARKKRGCYTREPQLGFGKDKVRSTYKPVW 645
PS+V NP TRW R+F Q +++ + + P GFGKDK+ TYKPVW
Sbjct: 121 ALPSIVVNPTTRWHRTFPKCNYQ--LVAADKGERDECFEVPYPTPGFGKDKISGTYKPVW 178
Query: 644 LFNSSEFGL-DNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECV--- 477
L+NS+E GL D TTCEVFDF TNAWRY+ PASP+ I+ Q PVY GSL+W T
Sbjct: 179 LYNSAELGLNDKATTCEVFDFATNAWRYIFPASPHLILHTQYPVYVDGSLHWFTALSHEG 238
Query: 476 ETKLLSFDLHTETFQVICNAPFSHVPDPRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSS 297
ET +LS DLH+E FQVI APF +V D +++C LD+RLCVS + +P QVIWSLD S
Sbjct: 239 ETMVLSLDLHSEIFQVISKAPFLNVSDEYKIVMCNLDDRLCVSEEKWP--NQVIWSLDDS 296
Query: 296 NMPTTWKQMCSIDLTKTCFL-DLPYFPDPALLPIAIVDETKLLL-GYSCGSPLVIHDLHT 123
+ TWKQ+ SIDL T L + F A P+A++D+ KLL G+ + HD T
Sbjct: 297 D-HKTWKQIYSIDLIITSSLFGITRF---AFTPLAVLDKDKLLFYDREHGNAFLTHDPDT 352
Query: 122 NSYVFYSFPKMLDYPVRYFPSLFS 51
SY K V YFPSL S
Sbjct: 353 KSYDLPYTSKRWARVVCYFPSLIS 376
>gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 270 bits (688), Expect = 6e-070
Identities = 158/322 (49%), Positives = 201/322 (62%), Gaps = 23/322 (7%)
Frame = -3
Query: 1184 MMLKRH--RGEEVLPHDVVELILEKLPVVSLLRFKRVSKTWKSTIESPSFKQRQVVMITR 1011
M K+H R E LPHD VELILE+LP SLLRFK VSK W STI+ F++R + R
Sbjct: 1 MWSKKHCLRMMESLPHDAVELILERLPANSLLRFKAVSKQWNSTIQCQLFQERH--LRQR 58
Query: 1010 KSRG-PDILYVTWLGDEEEEEEILEEEANIMVGSCVIRSLKFPTRNDK------VCYGAC 852
+ G PD+L V+ L E+ +E +++GS +K T +K V + +C
Sbjct: 59 QQLGDPDVLMVS-LRREDVINPDIESLTTLVLGSS-SSPVKIHTPWEKENTDYLVSHSSC 116
Query: 851 DGLVCFFGNRNPSVVFNPATRWRRSFLHSRVQPRIIS--DARARKKRGCYTREPQLGFGK 678
DGLVC + + V NP TRW R +Q II D+ G Y +LGFGK
Sbjct: 117 DGLVCLYNPHHSGFVVNPTTRWYRPLPVCELQQLIIDLRDSFYLLGYGLY----KLGFGK 172
Query: 677 DKVRSTYKPVWLFNSSEFGLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSL 498
DK TYKPVWL+NS E GL+N TTCEVFDFTTNAWRYV PA+PYR++ PVY GSL
Sbjct: 173 DKFTGTYKPVWLYNSLEIGLENATTCEVFDFTTNAWRYVTPAAPYRVVHFPDPVYVDGSL 232
Query: 497 YWLTECVETKLLSFDLHTETFQVICNAPFSHVPDPRFLLLCILDNRLCVSLKIYPTSTQV 318
+W T+C ETK++SFDLHTE FQVI APF+ +P +++C LDNRLCVS + +P QV
Sbjct: 233 HWFTDCQETKVVSFDLHTEAFQVISKAPFAKNENPFDIVMCNLDNRLCVSQQKWP--NQV 290
Query: 317 IWSLDSSNMPTTWKQMCSIDLT 252
IWS S+N TW++M SID+T
Sbjct: 291 IWSFHSNN--KTWEKMYSIDVT 310
>gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 374
Score = 241 bits (613), Expect = 3e-061
Identities = 141/276 (51%), Positives = 172/276 (62%), Gaps = 20/276 (7%)
Frame = -3
Query: 1151 LPHDVVELILEKLPVVSLLRFKRVSKTWKSTIESPSFKQRQVVMITRKSRGPDILYVTWL 972
LPHDVVE ILE+L V LLRFK VSK WKSTIESP F++RQ ++S PD+L V+
Sbjct: 13 LPHDVVERILERLAVDPLLRFKAVSKQWKSTIESPFFQRRQFQQ-RQQSGNPDVLLVSLC 71
Query: 971 GDEEEEEEILEEEANIMVGSCVIRSLKFPTRNDK--------VCYGACDGLVCFFGNRNP 816
+ +I E A +++GS S+K PT ++ V +CDGLVC F R
Sbjct: 72 RYDVINLDI-EALATLVLGSS--SSVKIPTPWEEKEEDTEYLVSRDSCDGLVCLFNIRKS 128
Query: 815 SVVFNPATRWRRSFLHSRVQPRIISDARARKKRGCYTREPQLGFGKDKVRSTYKPVWLFN 636
V NP TRW ++Q I + G R +LGFGKDK+ TYKPVWL+N
Sbjct: 129 GFVVNPTTRWYHPLPPCQLQQVITGLGDSFYDLG--YRLSKLGFGKDKLTGTYKPVWLYN 186
Query: 635 SSEFGLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSF 456
S E GL+N TTCEVFDF+TNAWRYV PA+PYRI+ PV GSL+W TEC ETK+LSF
Sbjct: 187 SLEIGLENATTCEVFDFSTNAWRYVSPAAPYRIVGCPSPVCVDGSLHWFTECEETKILSF 246
Query: 455 DLHTETFQVICNAPFSHVPDPRFLLLCILDNRLCVS 348
DLHTETFQV+ APF++V LDNRLCVS
Sbjct: 247 DLHTETFQVVSKAPFANVDGFH------LDNRLCVS 276
>gi|15220334|ref|NP_172594.1| F-box and associated interaction domain-containing
protein [Arabidopsis thaliana]
Length = 312
Score = 231 bits (587), Expect = 3e-058
Identities = 116/207 (56%), Positives = 148/207 (71%), Gaps = 5/207 (2%)
Frame = -3
Query: 917 GSCVIRSLKFPTRNDKVCYGACDGLVCFFGNRNPSVVFNPATRWRRSFLHSRVQPRIISD 738
GS ++ + +FPT + +CYG+C+GL+C + +P++V NPAT+W RS S +Q + + D
Sbjct: 106 GSSIVSTFRFPTLHTLICYGSCEGLICIYCVYSPNIVVNPATKWHRSCPLSNLQ-QFLDD 164
Query: 737 ARARKKRGCYTREPQLGFGKDKVRSTYKPVWLFNSSEFGLDNVTTCEVFDFTTNAWRYVL 558
+K+ T P+L FGKDK+ TYK VWL+NSSEF LD+VTTCEVFDF+ NAWRYV
Sbjct: 165 KFEKKEYDFPT--PKLAFGKDKLNGTYKQVWLYNSSEFRLDDVTTCEVFDFSNNAWRYVH 222
Query: 557 PASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLHTETFQVICNAPFSHVPDPRFLLL 378
PASPYRI + Q PVY GS++WLTE E+K+LSF LHTETFQV+C APF DP +
Sbjct: 223 PASPYRINDYQDPVYSDGSVHWLTEGKESKILSFHLHTETFQVLCEAPFLRERDPVGDSM 282
Query: 377 CILDNRLCVSLKIYPTSTQVIWSLDSS 297
CILDNRLCVS P Q+IWSLDSS
Sbjct: 283 CILDNRLCVSEINGP--AQLIWSLDSS 307
>gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana]
Length = 796
Score = 223 bits (568), Expect = 5e-056
Identities = 132/295 (44%), Positives = 169/295 (57%), Gaps = 18/295 (6%)
Frame = -3
Query: 1115 LPVVSLLRFKRVSKTWKSTIESPSFKQRQVV--MITRKSRGPDILYVTWLGDEEEEEEIL 942
LP++S + WKS + S + + I+++S PD+L V+ + +
Sbjct: 475 LPLISKTQHLYFFHYWKSESYTHSNVIKYICDPYISKQSGDPDVLMVS-VFPHHVINPTI 533
Query: 941 EEEANIMVGSCVIRSLKFPTRNDKVCY----GACDGLVCFFGNRNPSVVFNPATRWRRSF 774
E + +GS + P D V Y +CDGLVC + + V NP TRW R
Sbjct: 534 ESLRTLQLGSSSTFKIPTPWEKDNVLYLVSHSSCDGLVCLYNHDKSGYVVNPTTRWYRPL 593
Query: 773 LHSRVQPRIIS--DARARKKRGCYTREPQLGFGKDKVRSTYKPVWLFNSSEFGLDNVTTC 600
Q +I D + KR + LGFGKDK R TYKPVWL+NS+E GL N TTC
Sbjct: 594 PLCDYQKLMIDLRDGYYKLKRKFF----MLGFGKDKFRGTYKPVWLYNSAEIGLKNATTC 649
Query: 599 EVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLHTETFQVICN 420
EVFDF+TNAWRYV A+PYRI PVY GSLYW TEC ETK+L F+LHTETFQV+C
Sbjct: 650 EVFDFSTNAWRYVTLAAPYRIAAYPAPVYLDGSLYWFTECKETKVLPFNLHTETFQVVCK 709
Query: 419 APFSHVPDPRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQMCSIDL 255
APF++V DP ++ LDNRLCVS +P QVIWS +S N TW ++CSI L
Sbjct: 710 APFANV-DPYKIVFYNLDNRLCVSEMKWP--NQVIWSFNSGN--KTWDKLCSIVL 759
>gi|15238138|ref|NP_196596.1| F-box protein [Arabidopsis thaliana]
Length = 445
Score = 223 bits (567), Expect = 6e-056
Identities = 137/295 (46%), Positives = 173/295 (58%), Gaps = 21/295 (7%)
Frame = -3
Query: 899 SLKFPTR-NDK---VCYGACDGLVCFFG-NRNPSVVFNPATRWRRSFLHSRVQPRIISDA 735
S++ PT DK VC +CDGL+C F PS+V NP TRW R+F Q +++
Sbjct: 158 SVQIPTPWEDKLYFVCNTSCDGLICLFSFYELPSIVVNPTTRWHRTFPKCNYQ--LVAAD 215
Query: 734 RARKKRGCYTREPQLGFGKDKVRSTYKPVWLFNSSEFGL-DNVTTCEVFDFTTNAWRYVL 558
+ + P GFGKDK+ TYKPVWL+NS+E L D TTCEVFDF TNAWRYV
Sbjct: 216 KGERHECFKVACPTPGFGKDKISGTYKPVWLYNSAELDLNDKPTTCEVFDFATNAWRYVF 275
Query: 557 PASPYRIIEGQKPVYFHGSLYWLTECV---ETKLLSFDLHTETFQVICNAPFSHVPDPRF 387
PASP+ I+ Q PVY GSL+W T ET +LS DLH+ETFQVI APF +V D +
Sbjct: 276 PASPHLILHTQDPVYVDGSLHWFTALSHEGETMVLSLDLHSETFQVISKAPFLNVSDEYY 335
Query: 386 LLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQMCSIDL--TKTCFLDLPYFPDP 213
+++C L +RLCVS + +P QVIWSLD S+ TWKQ+ SIDL T + F +
Sbjct: 336 IVMCNLGDRLCVSEQKWP--NQVIWSLDDSD-HKTWKQIYSIDLIITSSLFFSAIF---- 388
Query: 212 ALLPIAIVDETKLLLGYSC-GSPLVIHDLHTNSYVFYSFPKMLDYPVRYFPSLFS 51
A P+A++D+ KLL S G + HD T SY V YFPSL S
Sbjct: 389 AFTPLAVLDKDKLLFYDSTHGDAFLTHDPDTKSYDLPYTSNRCATVVCYFPSLIS 443
>gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 192 bits (487), Expect = 1e-046
Identities = 125/312 (40%), Positives = 175/312 (56%), Gaps = 8/312 (2%)
Frame = -3
Query: 1157 EVLPHDVVELILEKLPVVSLLRFKRVSKTWKSTIESPSFKQRQVVMITRKSRGPDILYVT 978
++LP+DVVE ILE+L V +LL+FK VSK WKSTI+ +F++RQ +M R+S PD+L V+
Sbjct: 2 DLLPYDVVEHILERLDVKTLLKFKFVSKQWKSTIQCRAFQERQ-LMHRRQSGNPDVLLVS 60
Query: 977 WLGDEEEEEEILEEEANIMVGSCVIRSLKFPTRND--KVCYGACDGLVCFFGNRNPSVVF 804
+ LE ++VGS V + P KVC +CDGL+C + + ++V
Sbjct: 61 VCDESYLIGTELEAMRTLVVGSSVSVRILTPWEKTLYKVCQSSCDGLICLYNDYPKNIVV 120
Query: 803 NPATRWRRSFLHSRVQPRIISDARARKKRGCYTREPQLGFGKDKVRSTYKPVWLFNSSEF 624
NP TRW R+F S Q R+ S + K G + ++ G K + N +
Sbjct: 121 NPTTRWHRTFPRSTYQ-RLTSHGESWAKLG-FGKDKINGTYKPVWLYNSAELGGLNDDDD 178
Query: 623 GLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLHT 444
+ T CEVFDFT+ AWRYV+PASPY I+ Q PVY GSL+WLT T +LSFDLHT
Sbjct: 179 NNNTSTICEVFDFTSKAWRYVVPASPYPILPYQDPVYVDGSLHWLTAGETTNVLSFDLHT 238
Query: 443 ETFQVICNAPFSHVPD--PRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQM 270
ETFQV+ APF H D R L++ N++ SL + + I+S+D N+ + W
Sbjct: 239 ETFQVMSKAPFLHHHDHSNRELVIKKWPNQVIWSLDSDHKTWKEIYSID-LNITSFWFGK 297
Query: 269 CSIDLTKTCFLD 234
LT +D
Sbjct: 298 HRFALTPLAVVD 309
>gi|297849494|ref|XP_002892628.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 299
Score = 180 bits (456), Expect = 5e-043
Identities = 100/219 (45%), Positives = 131/219 (59%), Gaps = 22/219 (10%)
Frame = -3
Query: 1181 MLKRHRGE------------EVLPHDVVELILEKLPVVSLLRFKRVSKTWKSTIESPSFK 1038
MLKRHR E LPHD+VELIL++LPV LLRFK VSK WKSTIES F+
Sbjct: 29 MLKRHRSRENQTKKRLCLSLEFLPHDLVELILQRLPVKPLLRFKSVSKNWKSTIESQRFQ 88
Query: 1037 QRQVVMITRKSRGPDILYVTWLGDEEEEEEILEEEANIMVGSCVIRSLKFPTRNDKVCYG 858
+ ++ +R++ GPD+L ++ E+ + + +M ++FP CYG
Sbjct: 89 EGNLI-CSRQALGPDVLLMSLC--EKGDAGLSGHARTVMFSLATASKVRFPFSGSMFCYG 145
Query: 857 ACDGLVCFFGNRNPSVVFNPATRWRRSFLHSRVQPRIISDARARKKRGCYTR--EPQLGF 684
CDGLVCF+ PS V NPAT+W RSF S Q +I + Y + +LG
Sbjct: 146 HCDGLVCFYCVYAPSFVMNPATKWHRSFPLSGYQQLVI-----ERYNRLYFKFISFKLGL 200
Query: 683 GKDKVRSTYKPVWLFNSSEFGLDNVTTCEVFDFTTNAWR 567
G+DK R YK VWL++SSE+GLDNVTTCE+FDF+TNAWR
Sbjct: 201 GRDKFRGIYKAVWLYSSSEYGLDNVTTCELFDFSTNAWR 239
>gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 166 bits (420), Expect = 7e-039
Identities = 78/133 (58%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Frame = -3
Query: 695 QLGFGKDKVRSTYKPVWLFNSSEFGLDNVTTCEVFDFTTNAWRYVLPASPYRIIEGQKPV 516
+L FGKD T+KPVWL+NSSE + N TTCEVFDF+TNAWRYV P++PYR++ PV
Sbjct: 128 KLAFGKDTFSGTFKPVWLYNSSEISIQNATTCEVFDFSTNAWRYVTPSAPYRVLGLPDPV 187
Query: 515 YFHGSLYWLTECVETKLLSFDLHTETFQVICNAPFS-HVPDPRFLLLCILDNRLCVSLKI 339
+ GSL+W T+C ETK+LS DLHTE FQVI APF+ HV P +++C LDNRLCVS
Sbjct: 188 FLDGSLHWFTDCQETKILSMDLHTEAFQVISKAPFADHVVRPYDIVMCNLDNRLCVSEMK 247
Query: 338 YPTSTQVIWSLDS 300
+P Q+IWS +S
Sbjct: 248 WP--NQLIWSFNS 258
>gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana]
Length = 391
Score = 162 bits (409), Expect = 1e-037
Identities = 101/199 (50%), Positives = 124/199 (62%), Gaps = 16/199 (8%)
Frame = -3
Query: 623 GLDNVTT-CEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLH 447
G +N +T CEVFDFTT AWR+V+PASPYRI+ Q PVY GSL+WLTE T +LSFDLH
Sbjct: 199 GNNNTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLH 258
Query: 446 TETFQVICNAPFSHVPD--PRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQ 273
ETFQV+ APF H D R L++C LD+RLCVS K++P QVIWSLDS + TWK+
Sbjct: 259 AETFQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSLDSDH--KTWKE 314
Query: 272 MCSIDL--TKTCFLDLPYFPDPALLPIAIVDETKLLL-GYSCGSPLVIHDLHTNSYVF-- 108
+ SIDL T + F + AL P+ + D+ KLL G L+ HD T SY F
Sbjct: 315 IYSIDLNITSSLFGSNGF----ALRPLGVFDKDKLLFCEPEYGDQLLTHDPKTKSYEFDY 370
Query: 107 YSFPKMLDYPVRYFPSLFS 51
F P+ YF SL S
Sbjct: 371 RFFSPTTALPLCYFQSLIS 389
>gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis thaliana]
Length = 391
Score = 159 bits (401), Expect = 1e-036
Identities = 100/199 (50%), Positives = 123/199 (61%), Gaps = 16/199 (8%)
Frame = -3
Query: 623 GLDNVTT-CEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLH 447
G +N +T CEVFDFTT AWR+V+PASPYRI+ Q PVY GSL+WLTE T +LSFDLH
Sbjct: 199 GNNNTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLH 258
Query: 446 TETFQVICNAPFSHVPD--PRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQ 273
ETFQV+ APF H D R L++C LD+RLCVS K++P QVIWSLDS + TWK+
Sbjct: 259 AETFQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSLDSDH--KTWKE 314
Query: 272 MCSIDL--TKTCFLDLPYFPDPALLPIAIVDETKLLL-GYSCGSPLVIHDLHTNSYVF-- 108
+ SIDL T + F + AL P+ + D+ KLL G L+ D T SY F
Sbjct: 315 VYSIDLNITSSLFGSNGF----ALRPLGVFDKDKLLFCEPEYGDQLLTRDPKTKSYEFDY 370
Query: 107 YSFPKMLDYPVRYFPSLFS 51
F P+ YF SL S
Sbjct: 371 RFFSPTTALPLCYFQSLIS 389
>gi|3859605|gb|AAC72871.1| T15B16.15 gene product [Arabidopsis thaliana]
Length = 311
Score = 156 bits (393), Expect = 1e-035
Identities = 99/196 (50%), Positives = 123/196 (62%), Gaps = 20/196 (10%)
Frame = -3
Query: 623 GLDNVTT-CEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLH 447
G +N +T C+VFDFTT AWR+V+PASPYRI+ Q PVY GSL+WLT T +LSFDLH
Sbjct: 123 GNNNTSTFCQVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLT----TNVLSFDLH 178
Query: 446 TETFQVICNAPFSHVPD--PRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQ 273
TETFQV+ APF H D R L++C LD+RLCVS K++P QVIWSLDS + TWK+
Sbjct: 179 TETFQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSLDSDH--KTWKE 234
Query: 272 MCSIDL--TKTCFLDLPYFPDPALLPIAIVDETKLLL-GYSCGSPLVIHDLHTNSYVF-- 108
+ SIDL T + F + AL P+A+ D+ KLL G L+ HD T SY F
Sbjct: 235 IYSIDLNITSSLFGSNGF----ALRPLAVFDKDKLLFCEPEYGDQLLTHDPKTKSYEFDY 290
Query: 107 YSFPKMLDYPVRYFPS 60
F P+ YF S
Sbjct: 291 RFFSPTTALPLCYFQS 306
>gi|15234258|ref|NP_192073.1| F-box associated ubiquitination effector family
protein [Arabidopsis thaliana]
Length = 300
Score = 156 bits (393), Expect = 1e-035
Identities = 99/196 (50%), Positives = 123/196 (62%), Gaps = 20/196 (10%)
Frame = -3
Query: 623 GLDNVTT-CEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLH 447
G +N +T C+VFDFTT AWR+V+PASPYRI+ Q PVY GSL+WLT T +LSFDLH
Sbjct: 112 GNNNTSTFCQVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLT----TNVLSFDLH 167
Query: 446 TETFQVICNAPFSHVPD--PRFLLLCILDNRLCVSLKIYPTSTQVIWSLDSSNMPTTWKQ 273
TETFQV+ APF H D R L++C LD+RLCVS K++P QVIWSLDS + TWK+
Sbjct: 168 TETFQVVSKAPFLHHHDYSSRELIMCNLDDRLCVSEKMWP--NQVIWSLDSDH--KTWKE 223
Query: 272 MCSIDL--TKTCFLDLPYFPDPALLPIAIVDETKLLL-GYSCGSPLVIHDLHTNSYVF-- 108
+ SIDL T + F + AL P+A+ D+ KLL G L+ HD T SY F
Sbjct: 224 IYSIDLNITSSLFGSNGF----ALRPLAVFDKDKLLFCEPEYGDQLLTHDPKTKSYEFDY 279
Query: 107 YSFPKMLDYPVRYFPS 60
F P+ YF S
Sbjct: 280 RFFSPTTALPLCYFQS 295
>gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 144 bits (363), Expect = 3e-032
Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
Frame = -3
Query: 782 RSFLHSRVQPRIISDARARKKRGCYTREPQLGFGKDKVRSTYKPVWLFNSSEFGLDN--- 612
R LHS ++ + D A + E +GFGKDK+ TYKPVWL++S E GL+N
Sbjct: 8 RPILHSGLEWWVSLDGTALFLSANFD-ELDIGFGKDKITGTYKPVWLYSSLEIGLENARF 66
Query: 611 --VTTCEVFDFTTNAWRYVLPASPYRIIEGQKPVYFHGSLYWLTECVETKLLSFDLHTET 438
+TTCEVFDF T+AWRYV PA+PYR+ KP+ GSL+W +C ETK+LSFDLHTET
Sbjct: 67 STLTTCEVFDFNTDAWRYVSPAAPYRVFGNSKPICIDGSLHWFNDCEETKILSFDLHTET 126
Query: 437 FQVICNAPFSHV 402
FQV+ APF++V
Sbjct: 127 FQVVSKAPFTNV 138
>gi|297849770|ref|XP_002892766.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 143 bits (359), Expect = 9e-032
Identities = 73/132 (55%), Positives = 91/132 (68%), Gaps = 7/132 (5%)
Frame = -3
Query: 941 EEEANIMVGSCVIRSLKFPTRNDKVCYGACDGLVCFFGNRNPSVVFNPATRWRRSF-LHS 765
E I+ GS ++ ++KFPT VCYG+CDGLVC + P V NP TRW +SF L S
Sbjct: 73 EAPKRIVFGSSIVSTIKFPTICSIVCYGSCDGLVCLYCVSTPGFVVNPVTRWHQSFPLSS 132
Query: 764 RVQPRIISDARARKKRG-CYTREPQLGFGKDKVRSTYKPVWLFNSSEFGLDNVTTCEVFD 588
Q R+ AR +G + +LGFGKDKV+ TYK VWL+NSSE+GLDNVTTCEVFD
Sbjct: 133 FQQLRM-----ARLNKGDFHAPNYKLGFGKDKVKGTYKLVWLYNSSEYGLDNVTTCEVFD 187
Query: 587 FTTNAWRYVLPA 552
F+TNAWRY++PA
Sbjct: 188 FSTNAWRYLVPA 199
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,958,629,739,972
Number of Sequences: 15229318
Number of Extensions: 2958629739972
Number of Successful Extensions: 698572373
Number of sequences better than 0.0: 0
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