BLASTX 7.6.2
Query= UN24798 /QuerySize=686
(685 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q32P73|RPB9_BOVIN DNA-directed RNA polymerase II subunit RPB9... 162 2e-039
sp|P36954|RPB9_HUMAN DNA-directed RNA polymerase II subunit RPB9... 162 2e-039
sp|P60898|RPB9_MOUSE DNA-directed RNA polymerase II subunit RPB9... 162 2e-039
sp|P60899|RPB9_PIG DNA-directed RNA polymerase II subunit RPB9 O... 162 2e-039
sp|P36958|RPB9_DROME DNA-directed RNA polymerase II subunit RPB9... 159 1e-038
sp|P27999|RPB9_YEAST DNA-directed RNA polymerase II subunit RPB9... 109 3e-023
sp|Q6FS48|RPB9_CANGA DNA-directed RNA polymerase II subunit RPB9... 107 8e-023
sp|O74635|RPB9_SCHPO DNA-directed RNA polymerase II subunit RPB9... 106 1e-022
sp|Q755B3|RPB9_ASHGO DNA-directed RNA polymerase II subunit RPB9... 106 2e-022
sp|Q8SQU1|RPB9_ENCCU DNA-directed RNA polymerase II subunit RPB9... 76 2e-013
sp|Q9Y2Y1|RPC10_HUMAN DNA-directed RNA polymerase III subunit RP... 53 1e-006
sp|Q2M2S7|RPC10_BOVIN DNA-directed RNA polymerase III subunit RP... 53 2e-006
sp|Q9CQZ7|RPC10_MOUSE DNA-directed RNA polymerase III subunit RP... 53 2e-006
>sp|Q32P73|RPB9_BOVIN DNA-directed RNA polymerase II subunit RPB9 OS=Bos taurus
GN=POLR2I PE=2 SV=1
Length = 125
Score = 162 bits (409), Expect = 2e-039
Identities = 70/112 (62%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Frame = +1
Query: 130 MKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVA 309
++FC+ECNN+LYPKEDKE ILLYACRNCD+Q+ ADN+C+Y N++ H V E TQI++DV+
Sbjct: 14 IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73
Query: 310 SDPTLPRTKAVRCAKCQHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRE 462
DPTLPRT+ C KC H EAVFFQ+ +AR E+ M L++VC P+CGHRW E
Sbjct: 74 QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>sp|P36954|RPB9_HUMAN DNA-directed RNA polymerase II subunit RPB9 OS=Homo
sapiens GN=POLR2I PE=1 SV=1
Length = 125
Score = 162 bits (409), Expect = 2e-039
Identities = 70/112 (62%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Frame = +1
Query: 130 MKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVA 309
++FC+ECNN+LYPKEDKE ILLYACRNCD+Q+ ADN+C+Y N++ H V E TQI++DV+
Sbjct: 14 IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73
Query: 310 SDPTLPRTKAVRCAKCQHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRE 462
DPTLPRT+ C KC H EAVFFQ+ +AR E+ M L++VC P+CGHRW E
Sbjct: 74 QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>sp|P60898|RPB9_MOUSE DNA-directed RNA polymerase II subunit RPB9 OS=Mus
musculus GN=Polr2i PE=2 SV=1
Length = 125
Score = 162 bits (409), Expect = 2e-039
Identities = 70/112 (62%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Frame = +1
Query: 130 MKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVA 309
++FC+ECNN+LYPKEDKE ILLYACRNCD+Q+ ADN+C+Y N++ H V E TQI++DV+
Sbjct: 14 IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73
Query: 310 SDPTLPRTKAVRCAKCQHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRE 462
DPTLPRT+ C KC H EAVFFQ+ +AR E+ M L++VC P+CGHRW E
Sbjct: 74 QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>sp|P60899|RPB9_PIG DNA-directed RNA polymerase II subunit RPB9 OS=Sus scrofa
GN=POLR2I PE=3 SV=1
Length = 125
Score = 162 bits (409), Expect = 2e-039
Identities = 70/112 (62%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Frame = +1
Query: 130 MKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVA 309
++FC+ECNN+LYPKEDKE ILLYACRNCD+Q+ ADN+C+Y N++ H V E TQI++DV+
Sbjct: 14 IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73
Query: 310 SDPTLPRTKAVRCAKCQHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRE 462
DPTLPRT+ C KC H EAVFFQ+ +AR E+ M L++VC P+CGHRW E
Sbjct: 74 QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>sp|P36958|RPB9_DROME DNA-directed RNA polymerase II subunit RPB9 OS=Drosophila
melanogaster GN=RpII15 PE=1 SV=2
Length = 129
Score = 159 bits (402), Expect = 1e-038
Identities = 70/112 (62%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 130 MKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVA 309
++FC+ECNN+LYPKEDKE ILLYACRNCD+++ AD+NC+Y N++ H + E T I+ DV
Sbjct: 18 IRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77
Query: 310 SDPTLPRTKAVRCAKCQHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRE 462
SDPTLPRT+ C KC H EAVFFQA T R EE M L++VC N NC HRW E
Sbjct: 78 SDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>sp|P27999|RPB9_YEAST DNA-directed RNA polymerase II subunit RPB9
OS=Saccharomyces cerevisiae GN=RPB9 PE=1 SV=1
Length = 122
Score = 109 bits (270), Expect = 3e-023
Identities = 52/111 (46%), Positives = 73/111 (65%), Gaps = 4/111 (3%)
Frame = +1
Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
M+T +FCR+CNN+LYP+EDKE + LL+ CR C + E A + VYR+E+ ++ E ++
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEE-GMTLFFVCCNPNCGH 450
D+ SDPTLPR+ C KC E VFFQ+ R ++ M LFFVC +C H
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVCL--SCSH 108
>sp|Q6FS48|RPB9_CANGA DNA-directed RNA polymerase II subunit RPB9 OS=Candida
glabrata GN=RPB9 PE=3 SV=1
Length = 122
Score = 107 bits (266), Expect = 8e-023
Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
Frame = +1
Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
M+T +FCR+CNN+LYP+EDKE + LL+ CR C + E A + VYR+E+ ++ E ++
Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYIEEAGSPLVYRHELITNIGETAGVVQ 60
Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEE-GMTLFFVCCNPNCGH 450
D+ SDPTLPR+ C KC E VFFQ+ R ++ M LFFVC C H
Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVCL--ACSH 108
>sp|O74635|RPB9_SCHPO DNA-directed RNA polymerase II subunit RPB9
OS=Schizosaccharomyces pombe GN=rpb9 PE=1 SV=1
Length = 113
Score = 106 bits (264), Expect = 1e-022
Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Frame = +1
Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
MS ++C ECNN+LYP+EDK +L ACRNCD+ E A + VYR+E+ S E T +
Sbjct: 1 MSNFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSH 60
Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQA-TARGEEGMTLFFVCCNPNCGHRWRE 462
D ++DPTLPR+ C +C EAVF+Q + RG+ MTL +VC +CG + E
Sbjct: 61 DASTDPTLPRSDK-ECPRCHQHEAVFYQTHSRRGDTMMTLIYVCV--HCGFAFEE 112
>sp|Q755B3|RPB9_ASHGO DNA-directed RNA polymerase II subunit RPB9 OS=Ashbya
gossypii GN=RPB9 PE=3 SV=1
Length = 122
Score = 106 bits (262), Expect = 2e-022
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Frame = +1
Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
M+T +FCR+CNN+LYP+EDKE+ LL+ CR C + E A VYR+E+ ++ E ++
Sbjct: 1 MTTFRFCRDCNNMLYPREDKEEQRLLFECRTCTYAEEAGTPLVYRHELITNIGETAGVVQ 60
Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEE-GMTLFFVCCNPNCGH 450
D+ SDPTLPR+ C +C + VFFQ+ R + M LFFVC C H
Sbjct: 61 DIGSDPTLPRSDR-ECPRCHSHDNVFFQSQQRRRDTSMVLFFVCL--GCSH 108
>sp|Q8SQU1|RPB9_ENCCU DNA-directed RNA polymerase II subunit RPB9
OS=Encephalitozoon cuniculi GN=RPB9 PE=3 SV=1
Length = 108
Score = 76 bits (186), Expect = 2e-013
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Frame = +1
Query: 133 KFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVAS 312
+FC+ECNN+LYPKED + L AC+NC+H + A ++ +Y + D+
Sbjct: 4 RFCKECNNLLYPKED--DNTLFLACKNCEHIQEAKSHRLYVKNFRPKHASIELYARDLVQ 61
Query: 313 DPTLPRTKAVRCAKCQHGEAVFFQATARGEE--GMTLFFVCC 432
DPTLP K + C C + ++FQ GEE +++F++CC
Sbjct: 62 DPTLPSVK-INCGNCGFNKGLYFQPRG-GEEDVALSIFYLCC 101
>sp|Q9Y2Y1|RPC10_HUMAN DNA-directed RNA polymerase III subunit RPC10 OS=Homo
sapiens GN=POLR3K PE=1 SV=2
Length = 108
Score = 53 bits (126), Expect = 1e-006
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 337 AVRCAKCQHGEAVFFQATAR-GEEGMTLFFVCCNPNCGHRWRE 462
A C KC+H A F Q R +E MT F+ CCN CGHRWR+
Sbjct: 66 AESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>sp|Q2M2S7|RPC10_BOVIN DNA-directed RNA polymerase III subunit RPC10 OS=Bos
taurus GN=POLR3K PE=3 SV=1
Length = 108
Score = 53 bits (125), Expect = 2e-006
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 346 CAKCQHGEAVFFQATAR-GEEGMTLFFVCCNPNCGHRWRE 462
C KC+H A F Q R +E MT F+ CCN CGHRWR+
Sbjct: 69 CPKCEHPRAYFMQLQTRYADEPMTTFYKCCNAQCGHRWRD 108
>sp|Q9CQZ7|RPC10_MOUSE DNA-directed RNA polymerase III subunit RPC10 OS=Mus
musculus GN=Polr3k PE=2 SV=1
Length = 108
Score = 53 bits (125), Expect = 2e-006
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 346 CAKCQHGEAVFFQATAR-GEEGMTLFFVCCNPNCGHRWRE 462
C KC+H A F Q R +E MT F+ CCN CGHRWR+
Sbjct: 69 CPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,745,191,639
Number of Sequences: 518415
Number of Extensions: 102745191639
Number of Successful Extensions: 656160410
Number of sequences better than 0.0: 0
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