BLASTX 7.6.2
Query= UN24798 /QuerySize=686
(685 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G16265.1 | Symbols: NRPB9B, NRPD9B, NRPE9B | N... 248 4e-066
TAIR9_protein||AT3G16980.1 | Symbols: NRPB9A, NRPD9A, NRPE9A | N... 238 3e-063
>TAIR9_protein||AT4G16265.1 | Symbols: NRPB9B, NRPD9B, NRPE9B | NRPB9B; DNA
binding / DNA-directed RNA polymerase/ nucleic acid binding /
transcription regulator/ zinc ion binding | chr4:9202529-9203975
REVERSE
Length = 115
Score = 248 bits (631), Expect = 4e-066
Identities = 113/115 (98%)
Frame = +1
Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60
Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE* 465
DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNC HRWRE*
Sbjct: 61 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE* 115
>TAIR9_protein||AT3G16980.1 | Symbols: NRPB9A, NRPD9A, NRPE9A | NRPB9A; DNA
binding / DNA-directed RNA polymerase/ nucleic acid binding /
transcription regulator/ zinc ion binding | chr3:5794526-5795699
FORWARD
Length = 115
Score = 238 bits (606), Expect = 3e-063
Identities = 107/115 (93%), Positives = 111/115 (96%)
Frame = +1
Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
MSTMKFCRECNNILYPKEDKEQ ILLYACRNCDHQE ADN+CVYRNEVHHSVSE+TQIL+
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60
Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE* 465
DVASDPTLPRTKAVRC+KCQH EAVFFQATARGEEGMTLFFVCCNPNCGHRWRE*
Sbjct: 61 DVASDPTLPRTKAVRCSKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE* 115
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,725,395,209
Number of Sequences: 33410
Number of Extensions: 12725395209
Number of Successful Extensions: 407964146
Number of sequences better than 0.0: 0
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