Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN24798


BLASTX 7.6.2

Query= UN24798 /QuerySize=686
        (685 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G16265.1 | Symbols: NRPB9B, NRPD9B, NRPE9B | N...    248   4e-066
TAIR9_protein||AT3G16980.1 | Symbols: NRPB9A, NRPD9A, NRPE9A | N...    238   3e-063

>TAIR9_protein||AT4G16265.1 | Symbols: NRPB9B, NRPD9B, NRPE9B | NRPB9B; DNA
        binding / DNA-directed RNA polymerase/ nucleic acid binding /
        transcription regulator/ zinc ion binding | chr4:9202529-9203975
        REVERSE

          Length = 115

 Score =  248 bits (631), Expect = 4e-066
 Identities = 113/115 (98%)
 Frame = +1

Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
           MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS
Sbjct:   1 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60

Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE* 465
           DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNC HRWRE*
Sbjct:  61 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE* 115

>TAIR9_protein||AT3G16980.1 | Symbols: NRPB9A, NRPD9A, NRPE9A | NRPB9A; DNA
        binding / DNA-directed RNA polymerase/ nucleic acid binding /
        transcription regulator/ zinc ion binding | chr3:5794526-5795699
        FORWARD

          Length = 115

 Score =  238 bits (606), Expect = 3e-063
 Identities = 107/115 (93%), Positives = 111/115 (96%)
 Frame = +1

Query: 121 MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 300
           MSTMKFCRECNNILYPKEDKEQ ILLYACRNCDHQE ADN+CVYRNEVHHSVSE+TQIL+
Sbjct:   1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60

Query: 301 DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE* 465
           DVASDPTLPRTKAVRC+KCQH EAVFFQATARGEEGMTLFFVCCNPNCGHRWRE*
Sbjct:  61 DVASDPTLPRTKAVRCSKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE* 115

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,725,395,209
Number of Sequences: 33410
Number of Extensions: 12725395209
Number of Successful Extensions: 407964146
Number of sequences better than 0.0: 0