BLASTX 7.6.2
Query= UN24844 /QuerySize=825
(824 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|51968556|dbj|BAD42970.1| unnamed protein product [Arabidopsis... 163 5e-038
gi|79461446|ref|NP_192183.2| F-box protein SKIP17 [Arabidopsis t... 163 5e-038
gi|297809865|ref|XP_002872816.1| hypothetical protein ARALYDRAFT... 153 3e-035
gi|297787872|ref|XP_002862153.1| predicted protein [Arabidopsis ... 109 7e-022
gi|297809873|ref|XP_002872820.1| hypothetical protein ARALYDRAFT... 102 6e-020
gi|240255723|ref|NP_192185.4| F-box protein [Arabidopsis thaliana] 89 5e-016
gi|334186327|ref|NP_001190662.1| F-box protein [Arabidopsis thal... 89 5e-016
gi|297809869|ref|XP_002872818.1| hypothetical protein ARALYDRAFT... 75 8e-012
>gi|51968556|dbj|BAD42970.1| unnamed protein product [Arabidopsis thaliana]
Length = 479
Score = 163 bits (410), Expect = 5e-038
Identities = 90/133 (67%), Positives = 101/133 (75%), Gaps = 4/133 (3%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLV-SD 647
FLR+LG SCKEN LKTLI+R+C KL+E EVLE CNSLL GNFK IR IDVSSN+GL SD
Sbjct: 327 FLRELGLSCKENLLKTLILRSCPKLQEKEVLEFCNSLLTGNFKSIRQIDVSSNSGLASSD 386
Query: 646 GGVRSRSYNPTLPLEKLKEERPDVTLVADFPLERSGKRYLVEGDDEELREIEMMEAKNDE 467
G R P PLE+LKEER DVT VADFP SGKRY V D+EELR IEMMEA++DE
Sbjct: 387 RG--KRCNKPNFPLERLKEERSDVTFVADFPSTSSGKRYGV-CDEEELRLIEMMEAEDDE 443
Query: 466 VDDDDDDSFDDDD 428
VD++DD D DD
Sbjct: 444 VDEEDDSDDDTDD 456
>gi|79461446|ref|NP_192183.2| F-box protein SKIP17 [Arabidopsis thaliana]
Length = 479
Score = 163 bits (410), Expect = 5e-038
Identities = 90/133 (67%), Positives = 101/133 (75%), Gaps = 4/133 (3%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLV-SD 647
FLR+LG SCKEN LKTLI+R+C KL+E EVLE CNSLL GNFK IR IDVSSN+GL SD
Sbjct: 327 FLRELGLSCKENLLKTLILRSCPKLQEKEVLEFCNSLLTGNFKSIRQIDVSSNSGLASSD 386
Query: 646 GGVRSRSYNPTLPLEKLKEERPDVTLVADFPLERSGKRYLVEGDDEELREIEMMEAKNDE 467
G R P PLE+LKEER DVT VADFP SGKRY V D+EELR IEMMEA++DE
Sbjct: 387 RG--KRCNKPNFPLERLKEERSDVTFVADFPSTSSGKRYGV-CDEEELRLIEMMEAEDDE 443
Query: 466 VDDDDDDSFDDDD 428
VD++DD D DD
Sbjct: 444 VDEEDDSDDDTDD 456
>gi|297809865|ref|XP_002872816.1| hypothetical protein ARALYDRAFT_490282
[Arabidopsis lyrata subsp. lyrata]
Length = 480
Score = 153 bits (386), Expect = 3e-035
Identities = 82/133 (61%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLV-SD 647
FLR++G SCKE+ LKTLI+RNC KL+E E+LE CNSLL G+FK IRHID+SSN GL SD
Sbjct: 330 FLREVGPSCKESLLKTLILRNCPKLQEKEMLEFCNSLLTGSFKSIRHIDISSNRGLASSD 389
Query: 646 GGVRSRSYNPTLPLEKLKEERPDVTLVADFPLERSGKRYLVEGDDEELREIEMMEAKNDE 467
G R P PLE+LKEER DVT VADFP S ++ D+EELR IEMMEA++DE
Sbjct: 390 RG--KRCNKPNFPLERLKEERSDVTFVADFPPLPSSEKPYGVCDEEELRLIEMMEAEDDE 447
Query: 466 VDDDDDDSFDDDD 428
VDD+DD + DD
Sbjct: 448 VDDEDDSDEESDD 460
>gi|297787872|ref|XP_002862153.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 136
Score = 109 bits (271), Expect = 7e-022
Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLVSDG 644
FLR LG+ C ++PL+TLI+RNC L+E+EVL+ NSL+ GNF I++IDVSSN GL DG
Sbjct: 27 FLRVLGHRCNDSPLETLILRNCFSLQESEVLKFLNSLIAGNFISIQYIDVSSNKGLACDG 86
Query: 643 GVRSRSYNPTLPLEKLKEERPDVTLVADFPLE 548
R+ P PLEKLKEER DVT VA+FP E
Sbjct: 87 --ERRTSKPNFPLEKLKEERSDVTFVAEFPSE 116
>gi|297809873|ref|XP_002872820.1| hypothetical protein ARALYDRAFT_911934
[Arabidopsis lyrata subsp. lyrata]
Length = 100
Score = 102 bits (254), Expect = 6e-020
Identities = 52/91 (57%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLVSDG 644
FLR LG+ C+E+PL+TLI+R+C L+E EV++ NS++ GNFK IR+IDVSSNN L S+G
Sbjct: 8 FLRVLGDRCRESPLETLILRDCYSLQEGEVVKFLNSVIAGNFKSIRYIDVSSNNCLASNG 67
Query: 643 GVRSRSYNPTLPLEKLKEERPDVTLVADFPL 551
R+ P PLE LK++R DVT V DFPL
Sbjct: 68 S--RRTSLPNFPLETLKKKRWDVTFVGDFPL 96
>gi|240255723|ref|NP_192185.4| F-box protein [Arabidopsis thaliana]
Length = 506
Score = 89 bits (220), Expect = 5e-016
Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLVSDG 644
F R L K++PL+TLI+R+C L+E+EVL NSLL G+FK+IR IDVS+ +GLV DG
Sbjct: 342 FFRGLELCGKDSPLETLILRDCYILKESEVLLFLNSLLAGDFKYIRLIDVSNVDGLVCDG 401
Query: 643 GVRSRSYNPTLPLEKLKEERPDVTLVADFPLERS 542
G +R++ P P+E+LK++R +VT VA F + S
Sbjct: 402 G--NRTFEPRFPIEELKKQRSNVTFVAIFESQSS 433
>gi|334186327|ref|NP_001190662.1| F-box protein [Arabidopsis thaliana]
Length = 551
Score = 89 bits (220), Expect = 5e-016
Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLVSDG 644
F R L K++PL+TLI+R+C L+E+EVL NSLL G+FK+IR IDVS+ +GLV DG
Sbjct: 347 FFRGLELCGKDSPLETLILRDCYILKESEVLLFLNSLLAGDFKYIRLIDVSNVDGLVCDG 406
Query: 643 GVRSRSYNPTLPLEKLKEERPDVTLVADFPLERS 542
G +R++ P P+E+LK++R +VT VA F + S
Sbjct: 407 G--NRTFEPRFPIEELKKQRSNVTFVAIFESQSS 438
>gi|297809869|ref|XP_002872818.1| hypothetical protein ARALYDRAFT_352555
[Arabidopsis lyrata subsp. lyrata]
Length = 426
Score = 75 bits (184), Expect = 8e-012
Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Frame = -2
Query: 823 FLRDLGNSCKENPLKTLIMRNCVKLEENEVLELCNSLLQGNFKFIRHIDVSSNNGLVSDG 644
FLRDL SC+++ +KTLI+R+C LE E+ +SLL G+FKFIR IDV+S +++DG
Sbjct: 339 FLRDLRISCRDSTIKTLILRDCPSLERREIGYFLDSLLNGHFKFIRQIDVTSE--VIADG 396
Query: 643 GVRSRSYNPTLPLEKLKEERPDVTLVA 563
G L KLKE+R DVT+VA
Sbjct: 397 G--KEIIVGKYILSKLKEQRSDVTVVA 421
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,958,629,739,972
Number of Sequences: 15229318
Number of Extensions: 2958629739972
Number of Successful Extensions: 698572373
Number of sequences better than 0.0: 0
|
