BLASTX 7.6.2
Query= UN24936 /QuerySize=1004
(1003 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FLB0|RH18_ARATH DEAD-box ATP-dependent RNA helicase 18 OS=A... 403 1e-111
sp|Q8GXD6|RH49_ARATH DEAD-box ATP-dependent RNA helicase 49 OS=A... 353 1e-096
sp|Q761Z9|RH18_ORYSJ DEAD-box ATP-dependent RNA helicase 18 OS=O... 307 1e-082
sp|Q54EC2|DDX55_DICDI Probable ATP-dependent RNA helicase ddx55 ... 224 9e-058
sp|Q2NL08|DDX55_BOVIN ATP-dependent RNA helicase DDX55 OS=Bos ta... 198 7e-050
sp|Q8NHQ9|DDX55_HUMAN ATP-dependent RNA helicase DDX55 OS=Homo s... 196 2e-049
sp|Q6ZPL9|DDX55_MOUSE ATP-dependent RNA helicase DDX55 OS=Mus mu... 196 2e-049
sp|Q8JHJ2|DDX55_DANRE ATP-dependent RNA helicase DDX55 OS=Danio ... 186 3e-046
sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus mu... 144 1e-033
sp|Q5KMN6|HAS1_CRYNE ATP-dependent RNA helicase HAS1 OS=Cryptoco... 143 3e-033
sp|Q4P6N0|HAS1_USTMA ATP-dependent RNA helicase HAS1 OS=Ustilago... 130 2e-029
sp|Q9FVV4|RH55_ARATH DEAD-box ATP-dependent RNA helicase 55 OS=A... 130 2e-029
sp|Q9VHU1|DDX55_DROME Probable ATP-dependent RNA helicase DDX55 ... 127 1e-028
sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia... 125 7e-028
sp|A1CTZ2|DBP4_ASPCL ATP-dependent RNA helicase dbp4 OS=Aspergil... 119 5e-026
sp|Q6CRF4|DBP4_KLULA ATP-dependent RNA helicase DBP4 OS=Kluyvero... 116 3e-025
sp|Q9UTP9|DBP4_SCHPO ATP-dependent RNA helicase dbp4 OS=Schizosa... 116 3e-025
sp|Q6FPT7|DBP4_CANGA ATP-dependent RNA helicase DBP4 OS=Candida ... 113 3e-024
sp|Q0UMB9|DBP4_PHANO ATP-dependent RNA helicase DBP4 OS=Phaeosph... 111 1e-023
>sp|Q9FLB0|RH18_ARATH DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis
thaliana GN=RH18 PE=2 SV=1
Length = 593
Score = 403 bits (1035), Expect = 1e-111
Identities = 201/260 (77%), Positives = 226/260 (86%), Gaps = 2/260 (0%)
Frame = +2
Query: 2 VENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASS 181
++N KKLIV+FMTCASVDYWGLVLSKIP LKSISLIPIHGDMKQNARDKALASFT+ASS
Sbjct: 270 IKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTKASS 329
Query: 182 AVLLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDY 361
LLCTDVAARGLDIPGIDYVVQYDPPQDP MFNHR GRTARLG++GRAIVFLLP+EE Y
Sbjct: 330 GALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLPKEEAY 389
Query: 362 VEFMRRRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
VEFMR R VP +E++CSE+ASDVIPIIRS AMKDR V+EKGLKAFVSFVR YKEH CS+I
Sbjct: 390 VEFMRIRRVPLEERKCSEDASDVIPIIRSAAMKDRAVMEKGLKAFVSFVRAYKEHHCSFI 449
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GE--AE 715
FRWK LEIGKLAMG GLLYLPSMSEVKQHRLSSEGFTPV +KFE+IKFK + + +
Sbjct: 450 FRWKDLEIGKLAMGYGLLYLPSMSEVKQHRLSSEGFTPVEGVKFEEIKFKDKYREKQRQQ 509
Query: 716 EAEHASKERETGTREKGERQ 775
+ ++R+ +EKG+R+
Sbjct: 510 NLQVRKEKRQEEKKEKGKRK 529
>sp|Q8GXD6|RH49_ARATH DEAD-box ATP-dependent RNA helicase 49 OS=Arabidopsis
thaliana GN=RH49 PE=2 SV=2
Length = 558
Score = 353 bits (905), Expect = 1e-096
Identities = 176/259 (67%), Positives = 206/259 (79%)
Frame = +2
Query: 2 VENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASS 181
+EN+ KKL+V+FMTCA VDYWGLVLSKIP LKSIS HG M Q RD ALASFTEASS
Sbjct: 261 IENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASS 320
Query: 182 AVLLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDY 361
VLLCTDVAARGLDIPGIDYVVQYDPPQDP +F HRVGRTAR+ ++GRAIVFL+P+E DY
Sbjct: 321 GVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETDY 380
Query: 362 VEFMRRRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
VEFMR R VP QE++CSE ASDVIPIIRS A+KDR VLEKGL+AFVSFVR YKEH CSYI
Sbjct: 381 VEFMRIRRVPLQERKCSENASDVIPIIRSLAIKDRAVLEKGLQAFVSFVRAYKEHHCSYI 440
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEA 721
F WK LEIGKLAMG G+L P +SEVKQ R+ GFTPV I FEDIK+K + + +
Sbjct: 441 FSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKYKNKSREKQRQQ 500
Query: 722 EHASKERETGTREKGERQE 778
+++ + ++G+R++
Sbjct: 501 NLLARKDKLQQEKRGKRKK 519
>sp|Q761Z9|RH18_ORYSJ DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa
subsp. japonica GN=Os01g0164500 PE=1 SV=2
Length = 647
Score = 307 bits (785), Expect = 1e-082
Identities = 151/260 (58%), Positives = 187/260 (71%)
Frame = +2
Query: 2 VENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASS 181
V+N KK++VYF TCA VDYW +VL + LK +IP HG MKQ R+KALASF+ SS
Sbjct: 280 VQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMKQGPREKALASFSALSS 339
Query: 182 AVLLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDY 361
+L+CTDVAARGLDIP +D +VQYDPPQDP +F HR GRTAR +EG AIVFLLP+E+ Y
Sbjct: 340 GILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTY 399
Query: 362 VEFMRRRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
VEF++RRGVP E++CS A D++P IRS A++DR V+EKGL AFVSFVR YKEH CSYI
Sbjct: 400 VEFLKRRGVPLTERECSTNAVDIVPQIRSAALEDRNVMEKGLTAFVSFVRAYKEHHCSYI 459
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEA 721
F WK LEIG+L M GLL +PSM EVK H LS EGFTPV D+ IK+K + + +
Sbjct: 460 FSWKDLEIGRLGMEYGLLQIPSMPEVKHHSLSLEGFTPVKDVDVTKIKYKDKAREKQRQK 519
Query: 722 EHASKERETGTREKGERQEE 781
K E R + E++ +
Sbjct: 520 TLKRKAEELALRPEIEKRRK 539
>sp|Q54EC2|DDX55_DICDI Probable ATP-dependent RNA helicase ddx55
OS=Dictyostelium discoideum GN=ddx55 PE=3 SV=1
Length = 663
Score = 224 bits (570), Expect = 9e-058
Identities = 113/257 (43%), Positives = 166/257 (64%), Gaps = 1/257 (0%)
Frame = +2
Query: 14 KKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAVLL 193
K K+I+YF+TC++VDY+ +L + VL +HG + R K SF++A++ LL
Sbjct: 311 KNKIIIYFLTCSTVDYFFKILQSVKVLSGKPFFSLHGKAPHSQRIKVFDSFSQATNGCLL 370
Query: 194 CTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEFM 373
TD+AARGLDIP +D+V+QYD PQDPK F HR+GRTAR+G++G A++FL PEE+ Y+EF+
Sbjct: 371 STDLAARGLDIPNVDWVLQYDSPQDPKAFVHRIGRTARMGRDGNALIFLSPEEDSYIEFL 430
Query: 374 RRRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIFRWK 553
+ + VP E +E ++V+P I+ + DR ++EKG+ A VS VRGYKEHLC YIF +
Sbjct: 431 KIKKVPLVEMVKAENVTNVLPEIKKISFNDREIMEKGVIAMVSHVRGYKEHLCPYIFVFH 490
Query: 554 SLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEAEHAS 733
L IG LA G GLLYLP M E++ L +E + T + I +K + E + E +
Sbjct: 491 RLNIGLLATGFGLLYLPRMPEIRDKTLIAEWTSGYTKDQILKIAYKEKK-KEKQRLEKVN 549
Query: 734 KERETGTREKGERQEEL 784
K + ++ ERQ+ +
Sbjct: 550 KIKLKKEKDAKERQDAI 566
>sp|Q2NL08|DDX55_BOVIN ATP-dependent RNA helicase DDX55 OS=Bos taurus GN=DDX55
PE=2 SV=1
Length = 601
Score = 198 bits (502), Expect = 7e-050
Identities = 103/257 (40%), Positives = 160/257 (62%), Gaps = 7/257 (2%)
Frame = +2
Query: 8 NQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAV 187
++++K +V+F TCA V+Y+G L + +K + ++ IHG MK R+K F + S +
Sbjct: 265 HKQEKHLVFFSTCACVEYYGKALETL--VKGVKIMCIHGKMKYK-RNKIFMEFRKLQSGI 321
Query: 188 LLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVE 367
L+CTDV ARG+DIP +++V+QYDPP + F HR GRTAR+G G A+VFLLP EE Y+
Sbjct: 322 LVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYIS 381
Query: 368 FMR-RRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIF 544
F+ + P QE + + +D++P +++ A+ DR V EKG+KAFVS+V+ Y +H C+ IF
Sbjct: 382 FLAINQKCPLQEMKLQKNTADLLPKLKAMALGDRAVFEKGMKAFVSYVQAYAKHECNLIF 441
Query: 545 RWKSLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEAE 724
R K L+ LA G LL +P M E++ + F PV D+ + I FK +I + + +
Sbjct: 442 RLKDLDFASLARGFALLRMPKMPELRGKQFPD--FVPV-DVNTDTIPFKDKIREKQRQKQ 498
Query: 725 HASKERETGTREKGERQ 775
++R+ T G R+
Sbjct: 499 LLEQQRKEKTENDGRRK 515
>sp|Q8NHQ9|DDX55_HUMAN ATP-dependent RNA helicase DDX55 OS=Homo sapiens GN=DDX55
PE=1 SV=3
Length = 600
Score = 196 bits (498), Expect = 2e-049
Identities = 105/257 (40%), Positives = 159/257 (61%), Gaps = 8/257 (3%)
Frame = +2
Query: 8 NQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAV 187
++++K +V+F TCA V+Y+G L + +K + ++ IHG MK R+K F + S +
Sbjct: 265 HKQEKHLVFFSTCACVEYYGKALEVL--VKGVKIMCIHGKMKYK-RNKIFMEFRKLQSGI 321
Query: 188 LLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVE 367
L+CTDV ARG+DIP +++V+QYDPP + F HR GRTAR+G G A+VFLLP EE Y+
Sbjct: 322 LVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYIN 381
Query: 368 FMR-RRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIF 544
F+ + P QE + +D++P ++S A+ DR V EKG+KAFVS+V+ Y +H C+ IF
Sbjct: 382 FLAINQKCPLQEMKPQRNTADLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIF 441
Query: 545 RWKSLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEAE 724
R K L+ LA G LL +P M E++ + F PV D+ + I FK +I E + +
Sbjct: 442 RLKDLDFASLARGFALLRMPKMPELRGKQFPD--FVPV-DVNTDTIPFKDKI-REKQRQK 497
Query: 725 HASKERETGTREKGERQ 775
++R T +G R+
Sbjct: 498 LLEQQRREKTENEGRRK 514
>sp|Q6ZPL9|DDX55_MOUSE ATP-dependent RNA helicase DDX55 OS=Mus musculus GN=Ddx55
PE=2 SV=2
Length = 600
Score = 196 bits (498), Expect = 2e-049
Identities = 108/256 (42%), Positives = 157/256 (61%), Gaps = 8/256 (3%)
Frame = +2
Query: 11 QKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAVL 190
Q++K +V+F TCA V+Y+G L + LK + ++ IHG MK R+K F + S +L
Sbjct: 266 QQEKHLVFFSTCACVEYYGKALEAL--LKKVKILCIHGKMKYK-RNKIFMEFRKLQSGIL 322
Query: 191 LCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEF 370
+CTDV ARG+DIP +++V+QYDPP + F HR GRTAR+G G A+VFLLP EE Y+ F
Sbjct: 323 VCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINF 382
Query: 371 MR-RRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIFR 547
+ + P QE D++P +R+ A+ DR V EKG+KAFVSFV+ Y +H CS IFR
Sbjct: 383 LAINQKCPLQEMSLQRNTIDLLPKLRAMALADRAVFEKGMKAFVSFVQAYAKHECSLIFR 442
Query: 548 WKSLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEAEH 727
K L+ LA G LL +P M E++ + F PV DI + I FK +I E + +
Sbjct: 443 LKDLDFAGLARGFALLRMPRMPELRGKQFPD--FVPV-DIDTDTIPFKDKI-REKQRQKL 498
Query: 728 ASKERETGTREKGERQ 775
++R+ + +G ++
Sbjct: 499 LEQKRKERSENEGRKK 514
>sp|Q8JHJ2|DDX55_DANRE ATP-dependent RNA helicase DDX55 OS=Danio rerio GN=ddx55
PE=2 SV=2
Length = 593
Score = 186 bits (471), Expect = 3e-046
Identities = 94/207 (45%), Positives = 137/207 (66%), Gaps = 4/207 (1%)
Frame = +2
Query: 5 ENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSA 184
+++ +K +V+F TCA V+Y+G L + +K++S+ IHG MK + R+K A F S
Sbjct: 264 QHKHEKQLVFFSTCACVEYFGKALEVL--VKNVSIHCIHGKMK-HKRNKIFADFRALKSG 320
Query: 185 VLLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYV 364
+L+CTDV ARG+DIP +++V+QYDPP F HR GRTAR+G +G A+VFLLP EE YV
Sbjct: 321 ILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLLPMEESYV 380
Query: 365 EFMR-RRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
F+ + P Q ++ DV+P +++ A+ DR + EKG++AFVS+V+ Y +H CS I
Sbjct: 381 NFLSINQKCPLQSFSSVKDVVDVLPKLKAMALGDRAMFEKGMRAFVSYVQAYAKHECSLI 440
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMSEVK 622
FR K L+ LA G LL LP M E++
Sbjct: 441 FRIKDLDFAALARGFALLRLPKMPELR 467
>sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus musculus GN=Ddx18
PE=2 SV=1
Length = 660
Score = 144 bits (361), Expect = 1e-033
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 6/202 (2%)
Frame = +2
Query: 5 ENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSA 184
+N+KKK++V+F +C SV Y +L+ I + ++ IHG KQN R F A S
Sbjct: 412 KNRKKKVMVFFSSCMSVKYHYELLNYI----DLPVLAIHGKQKQNKRTTTFFQFCNADSG 467
Query: 185 VLLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTAR-LGKEGRAIVFLLPEEEDY 361
+LLCTDVAARGLDIP +D++VQYDPP DPK + HRVGRTAR L G A++ L PEE +
Sbjct: 468 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGF 527
Query: 362 VEFMRRRGVPCQEKQCS-EEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSY 538
+ ++++ VP + S + SD+ + K+ + + +A+ S++R Y H
Sbjct: 528 LRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQ 587
Query: 539 IFRWKSLEIGKLAMGCGLLYLP 604
IF +L + ++A+ G P
Sbjct: 588 IFNVNNLNLPQVALSFGFKVPP 609
>sp|Q5KMN6|HAS1_CRYNE ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans
GN=HAS1 PE=3 SV=1
Length = 607
Score = 143 bits (359), Expect = 3e-033
Identities = 74/204 (36%), Positives = 117/204 (57%), Gaps = 5/204 (2%)
Frame = +2
Query: 5 ENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSA 184
+N KKK+IV+F +C SV Y +L+ I + ++ +HG KQ R F A +
Sbjct: 373 KNLKKKVIVFFSSCNSVKYHAELLNYI----DVPVLDLHGKQKQQKRTNTFFEFINAPAG 428
Query: 185 VLLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYV 364
+LLCTDVAARGLDIP +D+++Q+DPP DP+ + HRVGRTAR GK G++++FLLP E ++
Sbjct: 429 ILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGKSLLFLLPSELGFL 488
Query: 365 EFMRRRGVPCQEKQC-SEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
F++ VP E Q ++ +DV + S K+ + + S+++ Y + I
Sbjct: 489 RFLKVAKVPLNEYQFPQKKVADVQKQLESLISKNHYLNTSARDGYRSYLQAYASYSLKKI 548
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMS 613
F L++ K+ G P ++
Sbjct: 549 FDVNKLDLAKVGKAFGFAVPPKVN 572
>sp|Q4P6N0|HAS1_USTMA ATP-dependent RNA helicase HAS1 OS=Ustilago maydis GN=HAS1
PE=3 SV=1
Length = 517
Score = 130 bits (325), Expect = 2e-029
Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 5/204 (2%)
Frame = +2
Query: 5 ENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSA 184
+N KK+IV+ +C SV Y +L+ I + ++ +HG KQ R + A
Sbjct: 294 KNAGKKIIVFMSSCNSVKYHSDLLNFI----DVPVLDLHGKQKQQKRTNTFFEYCNAPCG 349
Query: 185 VLLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYV 364
LLCTDVAARGLDIP +D+++Q+DPP DP+ + HRVGRTAR G G++++FLLP E ++
Sbjct: 350 TLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNSGKSLLFLLPTELGFL 409
Query: 365 EFMRRRGVPCQEKQC-SEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
F++ VP E S++ ++V + K+ + + + S+++ Y + I
Sbjct: 410 RFLKVAKVPLNEYTFPSDKVANVQGQLEKLISKNYYLHQSARDGYRSYLQAYGSYSLKRI 469
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMS 613
F L++ K+A G P ++
Sbjct: 470 FDIHKLDLAKVAKAYGFSVPPKVN 493
>sp|Q9FVV4|RH55_ARATH DEAD-box ATP-dependent RNA helicase 55 OS=Arabidopsis
thaliana GN=RH55 PE=2 SV=1
Length = 465
Score = 130 bits (325), Expect = 2e-029
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = +2
Query: 2 VENQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASS 181
+EN+ KKL+V+FMTCA VDYWGLV+SKIP LKSIS P HG M Q RD ALASFTEASS
Sbjct: 234 IENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASS 293
Query: 182 AVLLCTDVAARGLDIPGIDYV 244
VLLCTDVAARGLDIPGI Y+
Sbjct: 294 GVLLCTDVAARGLDIPGIVYI 314
Score = 127 bits (319), Expect = 1e-028
Identities = 66/116 (56%), Positives = 82/116 (70%)
Frame = +2
Query: 431 IPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIFRWKSLEIGKLAMGCGLLYLPSM 610
I IRS A+KDR VLEKGLKAFVSFVR YKEH CSYIF WK LEIGKLAMG G+L P +
Sbjct: 311 IVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYI 370
Query: 611 SEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEAEHASKERETGTREKGERQE 778
SEVKQ R+ GFTPV I FEDIKFK + + + +++ + ++G+R++
Sbjct: 371 SEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKK 426
>sp|Q9VHU1|DDX55_DROME Probable ATP-dependent RNA helicase DDX55 homolog
OS=Drosophila melanogaster GN=CG9630 PE=2 SV=1
Length = 613
Score = 127 bits (319), Expect = 1e-028
Identities = 68/136 (50%), Positives = 86/136 (63%), Gaps = 3/136 (2%)
Frame = +2
Query: 20 KLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAVLLCT 199
K++V+F TCA V+YW L P+L +++ IHG MK N R + F AVLLCT
Sbjct: 268 KVMVFFPTCACVEYWAEALP--PLLPKRTVLGIHGKMK-NKRANVVEKFRNTPQAVLLCT 324
Query: 200 DVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEFMRR 379
DV ARGLD+P I++VVQ+DPP F HRVGRTAR G EG A+VFLLP E+ YV F++
Sbjct: 325 DVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKI 384
Query: 380 RGVPCQEKQCSEEASD 427
K +EEA D
Sbjct: 385 NQKVELTKLLTEEAED 400
>sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica
GN=HAS1 PE=3 SV=1
Length = 605
Score = 125 bits (312), Expect = 7e-028
Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 5/203 (2%)
Frame = +2
Query: 8 NQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAV 187
N KK+IV+ +C SV ++G +L+ I + ++ +HG KQ R F A V
Sbjct: 375 NAGKKIIVFLSSCNSVKFYGELLNYI----DLPVLDLHGKQKQQKRTNTFFEFINAKQGV 430
Query: 188 LLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVE 367
L+CTDVAARGLDIP +D+++Q+DPP DP+ + HRVGRTAR G++I+FL P E ++
Sbjct: 431 LICTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARGSASGKSIMFLTPSELGFLR 490
Query: 368 FMRRRGVPCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLK-AFVSFVRGYKEHLCSYIF 544
+++ VP E + + + + + L K + ++++ Y H ++
Sbjct: 491 YLKAAKVPLNEYEFPNKKIANVQSQLEKLISSNYWLNTSAKDGYRAYLQAYASHHLKTVY 550
Query: 545 RWKSLEIGKLAMGCGLLYLPSMS 613
+ L++ K+A G P ++
Sbjct: 551 QIDKLDLVKVAKSFGFNVPPKVN 573
>sp|A1CTZ2|DBP4_ASPCL ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus
GN=dbp4 PE=3 SV=1
Length = 823
Score = 119 bits (296), Expect = 5e-026
Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 7/248 (2%)
Frame = +2
Query: 8 NQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAV 187
N K K +V+F + V + + S + I L+ +HG KQ R + +F++A V
Sbjct: 291 NLKSKTMVFFSSGKQVRF--VYESFRHMQPGIPLMHLHGRQKQGGRLDIMTNFSQAKHCV 348
Query: 188 LLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLP-EEEDYV 364
L TDVAARGLD P +D+V+Q D P+D + HRVGRTAR G++GRA++FL P EEE +
Sbjct: 349 LFSTDVAARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYGRDGRAVLFLDPSEEEGML 408
Query: 365 EFMRRRGVPCQEKQC-SEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
+ + ++ VP ++ + + + +++ KD + G KAF+S+V+ I
Sbjct: 409 KRLEQKKVPIEKINIKANKQQSIKDQLQNMCFKDPELKYIGQKAFISYVKSVYIQKDKEI 468
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMSEVKQHRLSSEGFTPVTDIKFEDIKFKGQI*GEAEEA 721
F+ K L++ + A GL P + +K P G +AEE
Sbjct: 469 FKLKELKLDEFASSLGLPGAPRIKFIKGDDTKQRKNAPRAAAHLSSDDEAG---SDAEEG 525
Query: 722 EHASKERE 745
E +K++E
Sbjct: 526 EPKTKKKE 533
>sp|Q6CRF4|DBP4_KLULA ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis
GN=DBP4 PE=3 SV=1
Length = 770
Score = 116 bits (289), Expect = 3e-025
Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 7/211 (3%)
Frame = +2
Query: 14 KKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAVLL 193
K KLIV+ + V + K+ ISL+ +HG KQ AR + L F+ A L
Sbjct: 289 KSKLIVFLSSSKQVHFVYETFRKLQ--PGISLMHLHGRQKQTARTETLDKFSRAQHVCLF 346
Query: 194 CTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEED-YVEF 370
TDV ARG+D P +D+V+Q D P+D + HRVGR AR GKEG++++ L PEEE+ +++
Sbjct: 347 STDVVARGIDFPSVDWVIQVDCPEDVDTYIHRVGRAARFGKEGKSLIMLTPEEEEGFLKR 406
Query: 371 MRRRGV-PCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIFR 547
++ + + P + + + P ++S KD + G KAF+S+VR +F
Sbjct: 407 LKTKNIEPSRLNIKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVRSIYIQKDKEVFH 466
Query: 548 WKSLEIGKLAMGCGLLYLPSMSEVKQHRLSS 640
+ + + + A G LP ++K + S
Sbjct: 467 FDKIPLEQFANSLG---LPGAPKIKMRGMKS 494
>sp|Q9UTP9|DBP4_SCHPO ATP-dependent RNA helicase dbp4 OS=Schizosaccharomyces
pombe GN=dbp4 PE=1 SV=1
Length = 735
Score = 116 bits (289), Expect = 3e-025
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Frame = +2
Query: 14 KKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAVLL 193
K K IV+ +C V + + + ISL+ +HG KQ R + A FT + VL
Sbjct: 283 KFKTIVFLSSCKQVRFVYETFRR--MRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLF 340
Query: 194 CTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEFM 373
CTD+ ARGLD P +D+V+Q D P+D + HRVGRTAR + G A++ LLP EE +++ +
Sbjct: 341 CTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAFLKRL 400
Query: 374 RRRGVPCQEKQCSE-EASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIFRW 550
+ + + + + + + +++ KD + G KAF+S++R +F+
Sbjct: 401 ESKKIAVERINVKDGKKTSIRNQLQNLCFKDNDIKYIGQKAFISYLRSIYLQKDKDVFQL 460
Query: 551 KSLEIGKLAMGCGLLYLPSMS--EVKQHRLSSEGFTPVTDI 667
L + A GL P ++ ++K H S + + T +
Sbjct: 461 DKLPVEAFADSLGLPGTPKITFGKLKNHSQSQKDYNSSTSL 501
>sp|Q6FPT7|DBP4_CANGA ATP-dependent RNA helicase DBP4 OS=Candida glabrata
GN=DBP4 PE=3 SV=1
Length = 765
Score = 113 bits (281), Expect = 3e-024
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Frame = +2
Query: 14 KKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAVLL 193
K K+IV+F + V + K+ ISL+ +HG KQ AR + L F A L
Sbjct: 287 KTKMIVFFSSSKQVHFVYETFRKMQ--PGISLLHLHGRQKQRARTETLDKFFRAQQVCLF 344
Query: 194 CTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLPEEEDYVEFM 373
TDV ARG+D P +D+V+Q D P+D + HRVGR AR GK+GR+++ L P+EE ++ M
Sbjct: 345 ATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRAARYGKKGRSLIILTPQEEAFLTRM 404
Query: 374 RRRGV-PCQEKQCSEEASDVIPIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYIFRW 550
+ + P + + + P ++S KD + G KAF+S+V+ +F++
Sbjct: 405 AAKKIEPGKLTIKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVKSIYIQKDKEVFKF 464
Query: 551 KSLEIGKLAMGCGL 592
L + A GL
Sbjct: 465 DELPTEEFANSLGL 478
>sp|Q0UMB9|DBP4_PHANO ATP-dependent RNA helicase DBP4 OS=Phaeosphaeria nodorum
GN=DBP4 PE=3 SV=1
Length = 803
Score = 111 bits (276), Expect = 1e-023
Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 4/207 (1%)
Frame = +2
Query: 8 NQKKKLIVYFMTCASVDYWGLVLSKIPVLKSISLIPIHGDMKQNARDKALASFTEASSAV 187
++K K++V+F + +V + + S + I L+ IHG KQ AR A F+ A ++
Sbjct: 293 SKKSKILVFFSSAKAVRF--VYESFRHMQPGIPLLHIHGRQKQGARLDTTAKFSSAKNSC 350
Query: 188 LLCTDVAARGLDIPGIDYVVQYDPPQDPKMFNHRVGRTARLGKEGRAIVFLLP-EEEDYV 364
L TDVAARGLD P +D+V+Q D P D + HRVGRTAR +EGR ++FL P EEE +
Sbjct: 351 LFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEEGML 410
Query: 365 EFMRRRGVPCQEKQCSEEASDVI-PIIRSQAMKDRVVLEKGLKAFVSFVRGYKEHLCSYI 541
+ + + VP + ++ I +++ +D + G KAF+++V+ +
Sbjct: 411 KRLEAKKVPVEAINVRQKKRQSIKEQLQNMCFQDPALKYLGQKAFMTYVKSVYLQKDKEV 470
Query: 542 FRWKSLEIGKLAMGCGLLYLPSMSEVK 622
F+ K ++ A GL P + +K
Sbjct: 471 FQLKEYDLEAFAASLGLPGTPRIKFLK 497
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,745,191,639
Number of Sequences: 518415
Number of Extensions: 102745191639
Number of Successful Extensions: 656160410
Number of sequences better than 0.0: 0
|
