BLASTX 7.6.2
Query= UN24947 /QuerySize=977
(976 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular... 461 5e-130
TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:... 136 3e-032
TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein | chr5:... 133 2e-031
TAIR9_protein||AT5G45880.1 | Symbols: | pollen Ole e 1 allergen... 49 4e-006
TAIR9_protein||AT4G18596.1 | Symbols: | pollen Ole e 1 allergen... 48 7e-006
>TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pollen Ole e 1 allergen and extensin (InterPro:IPR006041);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G26960.1); Has 90 Blast hits to 85 proteins in 14 species:
Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 83; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4170688-4171744
REVERSE
Length = 268
Score = 461 bits (1184), Expect = 5e-130
Identities = 215/271 (79%), Positives = 233/271 (85%), Gaps = 3/271 (1%)
Frame = -3
Query: 956 MYLPLLCLLLLAPSLLHQAFGRGRGLSPPGGSPDPSSRITVVGVVYCDTCAINTFSRQSY 777
MYLPLL LL LA L HQA GRGRG P GS DPSSRITVVGVVYCDTC+INTFSRQSY
Sbjct: 1 MYLPLLYLLFLASCLTHQALGRGRGRPSPEGSLDPSSRITVVGVVYCDTCSINTFSRQSY 60
Query: 776 FLQGVEVHVSCRFKASSPKTTEEVNISVNRTTNRNGVYKLDIPHVDGIDCVDGIAISSQC 597
FLQGVEVHV+CRFKASSPKT EEVNISVNRTTNR+GVYKL+IPHVDGIDCVDGIAISSQC
Sbjct: 61 FLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNRSGVYKLEIPHVDGIDCVDGIAISSQC 120
Query: 596 STKLLKPSSDNNNNNVRCNIPVFQTAANEVSIKSKQDRVCIYSLSALSYKPSHRNTTLCS 417
S K+LK SSD+N C+IPVFQTA NEVSIKSKQDRVCIYSLSALSYKP H+NT+LC
Sbjct: 121 SAKILKTSSDDNGG---CSIPVFQTATNEVSIKSKQDRVCIYSLSALSYKPPHKNTSLCG 177
Query: 416 GGKRHHHQREEKVEDKSRDSKLFWPYMPPYWFPWPYSTLPPLPTLPPLPSFPFPFLPLGN 237
G + HH+++EKVE K RDSK FWPY+ PYWFPWPY LPPLPTLPP PSFPFP LP GN
Sbjct: 178 NGGKKHHRKDEKVEKKFRDSKFFWPYLAPYWFPWPYPDLPPLPTLPPFPSFPFPSLPFGN 237
Query: 236 PNASLPAFDWRDPTTWIPYLPRFPPSDNNP* 144
PN +LPAFDW++P TWIPYLPRFPP D+NP*
Sbjct: 238 PNLALPAFDWKNPVTWIPYLPRFPPGDHNP* 268
>TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:9944859-9945459
REVERSE
Length = 175
Score = 136 bits (340), Expect = 3e-032
Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Frame = -3
Query: 860 PDPSSRITVVGVVYCDTCAINTFSRQSYFLQGVEVHVSCRFKASSPKTTEEVNISVNRTT 681
P P + IT++G VYCD C+ N+FS+ SYF+ GVEV + CRFKA+S TTE + S NRTT
Sbjct: 31 PKPDAEITIMGFVYCDVCSKNSFSKHSYFMSGVEVRIVCRFKAASSTTTETITFSANRTT 90
Query: 680 NRNGVYKLDIPHVDGIDCVDGIAISSQCSTKLLKPSSDNNNNNVRCNIPVFQTAANEVSI 501
N G+YK+ I +DC D +++S C L+ N ++ CNIP ++T ++V
Sbjct: 91 NEFGLYKVAI---SSLDCADVDSLASSCQASLI---GRKNFSDSSCNIPGYRTTTDQVLF 144
Query: 500 KSKQDRVCIYSLSALSYKPSHRNTTLC 420
KS+Q C+Y +AL+++P R+ LC
Sbjct: 145 KSQQSNSCVYGFNALNFRPFKRDLALC 171
>TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein |
chr5:16433478-16434076 REVERSE
Length = 173
Score = 133 bits (334), Expect = 2e-031
Identities = 64/157 (40%), Positives = 95/157 (60%), Gaps = 9/157 (5%)
Frame = -3
Query: 881 LSPPGGSPDPSSRITVVGVVYCDTCAINTFSRQSYFLQGVEVHVSCRFKASSPKTTEEVN 702
LS S P+ +ITV+G+VYCD C+ N+FS SYF+ GVEV + CRF ++S +T E +
Sbjct: 20 LSLKHSSAKPNGKITVMGLVYCDVCSNNSFSNHSYFIPGVEVRIICRFNSASSRTREMIT 79
Query: 701 ISVNRTTNRNGVYKLDIPHVDGIDCVDGI---AISSQCSTKLLKPSSDNNNNNVRCNIPV 531
S NRTTN G+YKLDI ++G+ C ++ + C L+ S D+ CN+P
Sbjct: 80 FSANRTTNELGLYKLDITSLEGVACAAEAKKDSLMASCQASLIGRSKDS------CNVPG 133
Query: 530 FQTAANEVSIKSKQDRVCIYSLSALSYKPSHRNTTLC 420
F+T +V KSK +C+Y +AL+++P +N LC
Sbjct: 134 FRTTTEQVVFKSKISNLCVYGFTALNFRPLEKNLHLC 170
>TAIR9_protein||AT5G45880.1 | Symbols: | pollen Ole e 1 allergen and extensin
family protein | chr5:18609934-18611066 REVERSE
Length = 175
Score = 49 bits (115), Expect = 4e-006
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = -3
Query: 857 DPSSRITVVGVVYCDTCAINTFSRQSYFLQGVEVHVSCRFKASSPKTTEEVNISVNRTTN 678
D R + G VYCDTC + +R S FL+G +V + CR +T + ++ T+
Sbjct: 30 DDFDRFQIQGSVYCDTCRVQFVTRLSKFLEGAKVKLECR-----SRTNGTITLTKEAVTD 84
Query: 677 RNGVYKLDI 651
+ G YK+++
Sbjct: 85 KTGSYKMEV 93
>TAIR9_protein||AT4G18596.1 | Symbols: | pollen Ole e 1 allergen and extensin
family protein | chr4:10239114-10239728 FORWARD
Length = 173
Score = 48 bits (113), Expect = 7e-006
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = -3
Query: 857 DPSSRITVVGVVYCDTCAINTFSRQSYFLQGVEVHVSCRFKASSPKTTEEVNISVNRTTN 678
D R + G VYCDTC + +R S FL+G +V + CR +T V ++ T+
Sbjct: 28 DDFDRFQIQGSVYCDTCRVQFVTRLSKFLEGAKVKLECR-----SRTNGTVTLTKEAVTD 82
Query: 677 RNGVYKLDI 651
+ G Y++++
Sbjct: 83 KTGSYRMEV 91
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,770,432,235
Number of Sequences: 33410
Number of Extensions: 12770432235
Number of Successful Extensions: 408009821
Number of sequences better than 0.0: 0
|