Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN25023


BLASTX 7.6.2

Query= UN25023 /QuerySize=1449
        (1448 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G02890.1 | Symbols:  | PHD finger protein-rela...    139   4e-033
TAIR9_protein||AT5G16680.1 | Symbols:  | PHD finger family prote...    114   2e-025

>TAIR9_protein||AT3G02890.1 | Symbols:  | PHD finger protein-related |
        chr3:641043-645303 FORWARD

          Length = 964

 Score =  139 bits (350), Expect = 4e-033
 Identities = 86/167 (51%), Positives = 102/167 (61%), Gaps = 19/167 (11%)
 Frame = -3

Query: 1335 HVLFPLGCISRKKGEMF*STQEQTSFGV*CFAKYGRVLSTREGFYHENPSNREFSIDRPS 1156
            ++LF L  + R K E   +  + T     C      V   R+ F HENPSN++   DR  
Sbjct:  792 NMLFFLWGVFRGKKESCSNPPKNTPLPASC------VSPNRDTFRHENPSNKKSLTDRTL 845

Query: 1155 SRMQSCLKEND-KEGEAGGGV-----------SGAVE-ETEEGEIGFSPQLKDEKISGPR 1015
            SRMQSC+KE D KEG+A  G             G V+ ETEEGEIG SPQLK EK +GP 
Sbjct:  846 SRMQSCMKEEDAKEGKACSGTEKENAFSVSYGEGEVDVETEEGEIGVSPQLKYEKTAGPG 905

Query: 1014 RVNSSDVNQNVNMDDLTGVGLCEGPANKKLKTGTGVETKCNIFRRDT 874
             V S+D+NQ VN+DDL   GLCEGPANKKLKT TGVET C+I RRDT
Sbjct:  906 TVKSADMNQRVNVDDLNKEGLCEGPANKKLKTVTGVETGCSIVRRDT 952


 Score =  127 bits (317), Expect = 3e-029
 Identities = 60/71 (84%), Positives = 64/71 (90%)
 Frame = -1

Query: 1448 PLVDNMIQKDLALKGSLEGVELLIFASNQLPQNCQRWNMFFFLWGVFRGKKEKCSDPLKS 1269
            PLVDNMIQKDLALKG+LEGVELLIFASNQLPQ+CQRWNM FFLWGVFRGKKE CS+P K+
Sbjct:  755 PLVDNMIQKDLALKGNLEGVELLIFASNQLPQDCQRWNMLFFLWGVFRGKKESCSNPPKN 814

Query: 1268 KPLSASNVLPN 1236
             PL AS V PN
Sbjct:  815 TPLPASCVSPN 825

>TAIR9_protein||AT5G16680.1 | Symbols:  | PHD finger family protein |
        chr5:5467534-5472956 REVERSE

          Length = 1291

 Score =  114 bits (283), Expect = 2e-025
 Identities = 82/186 (44%), Positives = 109/186 (58%), Gaps = 33/186 (17%)
 Frame = -3

Query: 1032 KISGPRRVNSSDVNQNVNMDDLTGVGLCEGPANKKLKTGTGVETKCNIFRRDTPGPHPRE 853
            ++S P   NSS +NQ V   +L   GLCEG  NKKLKT  G  + C    RDT G     
Sbjct: 1111 ELSNPANENSSAINQKV---ELNNDGLCEGSPNKKLKTENGSSSLC----RDTSG----H 1159

Query:  852 EETMIKKTPDAAERIVFPLDLNDGKEDDDEMVDDNPRALGND---SSKQRSLGMVPNLEL 682
            +  ++KK+P    ++VFPLDLN    DD EMV DN   LGND   ++++   G VPNLEL
Sbjct: 1160 DSGIMKKSP----KVVFPLDLN----DDSEMV-DNLSPLGNDENNNNRRLISGTVPNLEL 1210

Query:  681 ALGEDETTTTTGSVLPFMARPSATEKHRSSS----SQKAEEDS------AASLSLSLSFS 532
            ALG +ETT  T  +LPF++R S + +  ++S     QKA+E+       AASLSLSLSF 
Sbjct: 1211 ALGAEETTEATMGLLPFLSRSSNSGEQSNNSMNKEKQKADEEEEDDAEVAASLSLSLSFP 1270

Query:  531 PLEKEQ 514
              E+ +
Sbjct: 1271 GTEERK 1276


 Score =  104 bits (259), Expect = 1e-022
 Identities = 49/70 (70%), Positives = 59/70 (84%), Gaps = 2/70 (2%)
 Frame = -1

Query: 1448 PLVDNMIQKDLALKGSLEGVELLIFASNQLPQNCQRWNMFFFLWGVFRGKKEKCSDPLKS 1269
            PLVDNMI+ DLALKG+L+ V+LLIFASNQLP NCQRWNM +FLWGVF+G+KE  ++P K+
Sbjct:  902 PLVDNMIKNDLALKGNLDNVDLLIFASNQLPSNCQRWNMLYFLWGVFQGRKE--TNPQKN 959

Query: 1268 KPLSASNVLP 1239
              L  SNVLP
Sbjct:  960 TSLPTSNVLP 969

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,814,689,269
Number of Sequences: 33410
Number of Extensions: 12814689269
Number of Successful Extensions: 408027405
Number of sequences better than 0.0: 0