BLASTX 7.6.2
Query= UN25060 /QuerySize=944
(943 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53490.1 | Symbols: | thylakoid lumenal 17.4 ... 385 2e-107
TAIR9_protein||AT5G53490.2 | Symbols: | thylakoid lumenal 17.4 ... 384 5e-107
>TAIR9_protein||AT5G53490.1 | Symbols: | thylakoid lumenal 17.4 kDa protein,
chloroplast | chr5:21723488-21724621 REVERSE
Length = 237
Score = 385 bits (988), Expect = 2e-107
Identities = 200/240 (83%), Positives = 216/240 (90%), Gaps = 6/240 (2%)
Frame = +3
Query: 24 MASLPVHFSRNHLSSPNFSDRFRRSAERRSFVALVHCSA---RENDQGIKKTLFPVKELG 194
MASLPV F+RN +SSP FS RR E RS V VHCSA REN +G+KK+LFP+KELG
Sbjct: 1 MASLPVQFTRNQISSPFFSVNLRR--EPRSLVT-VHCSAGENRENGEGVKKSLFPLKELG 57
Query: 195 CLACAALSAFTLTMASPVIAANQRLPPLSTDPARCEQAFVGNTIGQANGVYDKPLDLRFC 374
+ACAAL A TLT+ASPVIAANQRLPPLST+P RCE+AFVGNTIGQANGVYDKPLDLRFC
Sbjct: 58 SIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFC 117
Query: 375 DYTNDQSNLKGKTLSAALMSGAKFDGADMSEVVMSKAYAVGASFKGVNFSNAVIDRVNFG 554
DYTNDQ+NLKGKTLSAALM GAKFDGADM+EVVMSKAYAV ASFKGVNF+NAVIDRVNFG
Sbjct: 118 DYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFG 177
Query: 555 KSDLKGAVFKNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNVTINEEGRLVLGCR* 734
KS+LKGAVF+NTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN +INEEGRLVLGCR*
Sbjct: 178 KSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR* 237
>TAIR9_protein||AT5G53490.2 | Symbols: | thylakoid lumenal 17.4 kDa protein,
chloroplast | chr5:21723488-21724621 REVERSE
Length = 236
Score = 384 bits (985), Expect = 5e-107
Identities = 199/239 (83%), Positives = 215/239 (89%), Gaps = 5/239 (2%)
Frame = +3
Query: 24 MASLPVHFSRNHLSSPNFSDRFRRSAERRSFVALVHCSA--RENDQGIKKTLFPVKELGC 197
MASLPV F+RN +SSP FS RR E RS V VHCS REN +G+KK+LFP+KELG
Sbjct: 1 MASLPVQFTRNQISSPFFSVNLRR--EPRSLVT-VHCSGENRENGEGVKKSLFPLKELGS 57
Query: 198 LACAALSAFTLTMASPVIAANQRLPPLSTDPARCEQAFVGNTIGQANGVYDKPLDLRFCD 377
+ACAAL A TLT+ASPVIAANQRLPPLST+P RCE+AFVGNTIGQANGVYDKPLDLRFCD
Sbjct: 58 IACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCD 117
Query: 378 YTNDQSNLKGKTLSAALMSGAKFDGADMSEVVMSKAYAVGASFKGVNFSNAVIDRVNFGK 557
YTNDQ+NLKGKTLSAALM GAKFDGADM+EVVMSKAYAV ASFKGVNF+NAVIDRVNFGK
Sbjct: 118 YTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGK 177
Query: 558 SDLKGAVFKNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNVTINEEGRLVLGCR* 734
S+LKGAVF+NTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN +INEEGRLVLGCR*
Sbjct: 178 SNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR* 236
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,814,689,269
Number of Sequences: 33410
Number of Extensions: 12814689269
Number of Successful Extensions: 408027405
Number of sequences better than 0.0: 0
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