Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN25098


BLASTX 7.6.2

Query= UN25098 /QuerySize=698
        (697 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|15235250|ref|NP_192123.1| uncharacterized protein [Arabidopsi...    174   1e-041
gi|297809941|ref|XP_002872854.1| hypothetical protein ARALYDRAFT...    173   3e-041
gi|18378999|ref|NP_563661.1| uncharacterized protein [Arabidopsi...    138   7e-031
gi|297843070|ref|XP_002889416.1| hypothetical protein ARALYDRAFT...    138   1e-030
gi|147780788|emb|CAN70483.1| hypothetical protein VITISV_002251 ...     61   1e-007
gi|225437489|ref|XP_002269552.1| PREDICTED: hypothetical protein...     61   1e-007

>gi|15235250|ref|NP_192123.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 112

 Score =  174 bits (440), Expect = 1e-041
 Identities = 89/112 (79%), Positives = 98/112 (87%), Gaps = 2/112 (1%)
 Frame = +3

Query:  42 MLSSRAFNAASRSSLSRPLLSKRLASS-GRTADPKIHSRNDGDEPSLFPTDPEGLDDVAN 218
           MLSS AF AA+RS+L R L +KRL+SS GRTADP+IH+RNDGDEPSLFP+DPEGLDDVAN
Sbjct:   1 MLSSPAF-AAARSTLGRRLHAKRLSSSTGRTADPEIHARNDGDEPSLFPSDPEGLDDVAN 59

Query: 219 PKTPADEIVPDIRPPGLEKEPLKPPKNPRATSHKIESTPVSLPADPSLQQKR 374
           PKTPADE VPDIRPPG  KEPL PPKNPR TSHK+ESTPV LPAD + QQKR
Sbjct:  60 PKTPADEDVPDIRPPGFVKEPLSPPKNPRDTSHKLESTPVGLPADLNFQQKR 111

>gi|297809941|ref|XP_002872854.1| hypothetical protein ARALYDRAFT_912009
        [Arabidopsis lyrata subsp. lyrata]

          Length = 111

 Score =  173 bits (436), Expect = 3e-041
 Identities = 83/103 (80%), Positives = 91/103 (88%)
 Frame = +3

Query:  66 AASRSSLSRPLLSKRLASSGRTADPKIHSRNDGDEPSLFPTDPEGLDDVANPKTPADEIV 245
           AA+RS+L R L +KRLASSGRTADP+IH+RNDGDEP LFP+DPEGLDDVANPKTPADE V
Sbjct:   8 AAARSTLVRRLPAKRLASSGRTADPEIHARNDGDEPGLFPSDPEGLDDVANPKTPADEDV 67

Query: 246 PDIRPPGLEKEPLKPPKNPRATSHKIESTPVSLPADPSLQQKR 374
           PDIRPPG  KEPL PPKNPR TSHK+ESTPV LPAD + QQKR
Sbjct:  68 PDIRPPGFVKEPLSPPKNPRDTSHKLESTPVGLPADLNFQQKR 110

>gi|18378999|ref|NP_563661.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 247

 Score =  138 bits (347), Expect = 7e-031
 Identities = 70/124 (56%), Positives = 93/124 (75%), Gaps = 7/124 (5%)
 Frame = +3

Query:  42 MLSSR--AFNAASRSSLSRPLLSKRLA----SSGRTADPKIHSRNDGDEPSLFPTDPEGL 203
           M+ SR  AF +A+RS + RP+  +RLA    +SGRTADP+IH+ NDG +P+++P DPEG+
Sbjct:   2 MMQSRLLAFASAARSRV-RPIAQRRLAFGSSTSGRTADPEIHAGNDGADPAIYPRDPEGM 60

Query: 204 DDVANPKTPADEIVPDIRPPGLEKEPLKPPKNPRATSHKIESTPVSLPADPSLQQKRR*E 383
           DDVANPKT A+EIV D   P LE++PL PPK+PRAT+HK+ESTPV  P++P  QQKR+  
Sbjct:  61 DDVANPKTAAEEIVDDTPRPSLEEQPLVPPKSPRATAHKLESTPVGHPSEPHFQQKRKNS 120

Query: 384 QQKP 395
              P
Sbjct: 121 TASP 124

>gi|297843070|ref|XP_002889416.1| hypothetical protein ARALYDRAFT_470228
        [Arabidopsis lyrata subsp. lyrata]

          Length = 249

 Score =  138 bits (345), Expect = 1e-030
 Identities = 71/124 (57%), Positives = 92/124 (74%), Gaps = 7/124 (5%)
 Frame = +3

Query:  42 MLSSR--AFNAASRSSLSRPLLSKRLA----SSGRTADPKIHSRNDGDEPSLFPTDPEGL 203
           M+ SR  AF +A+RS + RP+  +RLA    +SGRTADP+IHS NDG +P+++P DPE +
Sbjct:   2 MMQSRLLAFASAARSRV-RPIAQRRLAFGSSTSGRTADPEIHSGNDGADPAIYPRDPEVM 60

Query: 204 DDVANPKTPADEIVPDIRPPGLEKEPLKPPKNPRATSHKIESTPVSLPADPSLQQKRR*E 383
           DDVANPKT ADEIV D   P LE++PL PPK+PRAT+HK+ESTPV  P++P  QQKR+  
Sbjct:  61 DDVANPKTAADEIVDDTPRPSLEEQPLVPPKSPRATAHKLESTPVGHPSEPHFQQKRKNS 120

Query: 384 QQKP 395
              P
Sbjct: 121 TASP 124

>gi|147780788|emb|CAN70483.1| hypothetical protein VITISV_002251 [Vitis
        vinifera]

          Length = 233

 Score =  61 bits (146), Expect = 1e-007
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
 Frame = +3

Query:  48 SSRAFNAASRSSLSRPLLSKRLASSGRTADPKIHSRNDG-DEPSLFPTDPEGLDDVANPK 224
           S R F+ A   ++ R   S    +SGRTADP+I++ N G  E  + P D + +DD     
Sbjct:  12 SYRVFSLARNRAMPRGPAS--APNSGRTADPEIYTANPGIKEDLVHPRDNDKIDD----- 64

Query: 225 TPADEIVPDIRPPGLEKEPLKPPKNPRATSHKIESTPVSLPADPSLQQKR 374
             + +   D++ P  E  P  PPK P A S ++E+T V+ P DP  QQKR
Sbjct:  65 --SQQRTEDVK-PSKETVPFVPPKPPYAASPRLETTGVNRPLDPITQQKR 111

>gi|225437489|ref|XP_002269552.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 232

 Score =  61 bits (146), Expect = 1e-007
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
 Frame = +3

Query:  48 SSRAFNAASRSSLSRPLLSKRLASSGRTADPKIHSRNDG-DEPSLFPTDPEGLDDVANPK 224
           S R F+ A   ++ R   S    +SGRTADP+I++ N G  E  + P D + +DD     
Sbjct:  12 SYRVFSLARNRAMPRGPAS--APNSGRTADPEIYTANPGIKEDLVHPRDNDKIDD----- 64

Query: 225 TPADEIVPDIRPPGLEKEPLKPPKNPRATSHKIESTPVSLPADPSLQQKR 374
             + +   D++ P  E  P  PPK P A S ++E+T V+ P DP  QQKR
Sbjct:  65 --SQQRTEDVK-PSKETVPFVPPKPPYAASPRLETTGVNRPLDPITQQKR 111

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,973,150,911,241
Number of Sequences: 15229318
Number of Extensions: 2973150911241
Number of Successful Extensions: 707362106
Number of sequences better than 0.0: 0