BLASTX 7.6.2
Query= UN25215 /QuerySize=768
(767 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L... 363 9e-101
TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L... 345 3e-095
TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L... 344 5e-095
TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIB... 341 4e-094
>TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L18A (RPL18aB) |
chr2:14532916-14534161 REVERSE
Length = 179
Score = 363 bits (930), Expect = 9e-101
Identities = 175/179 (97%), Positives = 177/179 (98%)
Frame = +1
Query: 49 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 228
M AFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 229 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 408
LAINEI+EKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 409 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 585
PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM* 179
>TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L18A (RPL18aC) |
chr3:4910773-4911933 FORWARD
Length = 179
Score = 345 bits (883), Expect = 3e-095
Identities = 166/179 (92%), Positives = 168/179 (93%)
Frame = +1
Query: 49 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 228
M FRFHQYQVVGRALPTE D PKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQM
Sbjct: 1 MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60
Query: 229 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 408
LAINEIFEKNPTTIKN+GIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120
Query: 409 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 585
PCIQIIKTATVPAKLCKRE TKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 179
>TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L18A (RPL18aA)
| chr1:10498458-10499373 REVERSE
Length = 179
Score = 344 bits (881), Expect = 5e-095
Identities = 165/179 (92%), Positives = 170/179 (94%)
Frame = +1
Query: 49 MVAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 228
M R HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQM
Sbjct: 1 MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60
Query: 229 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 408
LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 409 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 585
PCIQIIKTATVPA LCKRESTKQFHNSKIKFPLVFRKVRPP+RKLKTT+KA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM* 179
>TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN
L18A-1); structural constituent of ribosome | chr1:10498458-10501311
REVERSE
Length = 313
Score = 341 bits (873), Expect = 4e-094
Identities = 163/173 (94%), Positives = 168/173 (97%)
Frame = +1
Query: 67 HQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 246
HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQMLAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200
Query: 247 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 426
FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260
Query: 427 KTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 585
KTATVPA LCKRESTKQFHNSKIKFPLVFRKVRPP+RKLKTT+KA+KPNLFM*
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM* 313
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,904,828,436
Number of Sequences: 33410
Number of Extensions: 12904828436
Number of Successful Extensions: 408053267
Number of sequences better than 0.0: 0
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