BLASTX 7.6.2
Query= UN25217 /QuerySize=1215
(1214 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G14790.1 | Symbols: RHM3, ATRHM3 | RHM3 (RHAMN... 455 3e-128
TAIR9_protein||AT1G53500.1 | Symbols: MUM4, RHM2, ATRHM2, ATMUM4... 445 5e-125
TAIR9_protein||AT1G78570.1 | Symbols: RHM1, ROL1, ATRHM1 | RHM1 ... 407 8e-114
TAIR9_protein||AT1G63000.1 | Symbols: NRS/ER, UER1 | NRS/ER (NUC... 253 2e-067
>TAIR9_protein||AT3G14790.1 | Symbols: RHM3, ATRHM3 | RHM3 (RHAMNOSE
BIOSYNTHESIS 3); UDP-L-rhamnose synthase/ catalytic |
chr3:4964791-4966875 FORWARD
Length = 665
Score = 455 bits (1169), Expect = 3e-128
Identities = 220/259 (84%), Positives = 229/259 (88%), Gaps = 7/259 (2%)
Frame = +1
Query: 4 NRPFNDQRYFLDDQKLKKLGWAERTTWEEGLKKTMEWYTANPEWWGDVSGALLPHPRMLM 183
NRPFNDQRYFLDDQKLKKLGW ERT WEEGL+KTMEWYT NPEWWGDVSGALLPHPRMLM
Sbjct: 282 NRPFNDQRYFLDDQKLKKLGWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLM 341
Query: 184 MPGDRLCDSGDERKDADGNQTFTVVTSTKSGGSGDNKTSLKFLIYGKTGWLGGLLGKLCE 363
MPGDR D DE K+ADGNQTFTVVT TK+G SGD K SLKFLIYGKTGWLGGLLGKLCE
Sbjct: 342 MPGDRHSDGSDEHKNADGNQTFTVVTPTKAGCSGD-KRSLKFLIYGKTGWLGGLLGKLCE 400
Query: 364 KQGIVYEYGKGRLEDRASLVADIRRVKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAG 543
KQGI YEYGKGRLEDRASL+ADIR +KP+HVFNAAGLTGRPNVDWCESHK ETIRVNVAG
Sbjct: 401 KQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAG 460
Query: 544 TLTLADVCRENGLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFFGSFYSKTKAMVER 723
TLTLADVCREN LLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNF GSFYSKTKAMVE
Sbjct: 461 TLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEE 520
Query: 724 ASKR------IRQRMHLES 762
+ +R RM + S
Sbjct: 521 LLREFDNVCTLRVRMPISS 539
Score = 287 bits (733), Expect = 1e-077
Identities = 146/165 (88%), Positives = 150/165 (90%), Gaps = 2/165 (1%)
Frame = +2
Query: 665 KTNRTSSVPSTQKQRQWWKELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNI 844
K N T S S K + +ELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNI
Sbjct: 503 KPNFTGSFYS--KTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNI 560
Query: 845 PNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPSFKWSNFTLEE 1024
PNSMT+LDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEP FKWSNF LEE
Sbjct: 561 PNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEE 620
Query: 1025 QAKVIVAARSNNEMDGAKLSKEFPELLSIKDSLIKYVFEPNKRT* 1159
QAKVIVA RSNNEMDGAKLSKEFPE+LSIKDSLIKYVFEPNKRT*
Sbjct: 621 QAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT* 665
>TAIR9_protein||AT1G53500.1 | Symbols: MUM4, RHM2, ATRHM2, ATMUM4 | MUM4
(MUCILAGE-MODIFIED 4); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/
UDP-4-keto-rhamnose-4-keto-reductase/ UDP-L-rhamnose synthase/
UDP-glucose 4,6-dehydratase/ catalytic | chr1:19967157-19969239
REVERSE
Length = 668
Score = 445 bits (1142), Expect = 5e-125
Identities = 218/261 (83%), Positives = 226/261 (86%), Gaps = 10/261 (3%)
Frame = +1
Query: 4 NRPFNDQRYFLDDQKLKKLGWAERTTWEEGLKKTMEWYTANPEWWGDVSGALLPHPRMLM 183
NRPFNDQRYFLDDQKLKKLGW ERT WE+GLKKTM+WYT NPEWWGDVSGALLPHPRMLM
Sbjct: 284 NRPFNDQRYFLDDQKLKKLGWQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLM 343
Query: 184 MPGDRLCDSGDERKDADGN--QTFTVVTSTKSGGSGDNKTSLKFLIYGKTGWLGGLLGKL 357
MPG RL D E+KD N QTFTVVT K+G SGD K SLKFLIYGKTGWLGGLLGKL
Sbjct: 344 MPGGRLSDGSSEKKDVSSNTVQTFTVVT-PKNGDSGD-KASLKFLIYGKTGWLGGLLGKL 401
Query: 358 CEKQGIVYEYGKGRLEDRASLVADIRRVKPTHVFNAAGLTGRPNVDWCESHKPETIRVNV 537
CEKQGI YEYGKGRLEDRASLVADIR +KPTHVFNAAGLTGRPNVDWCESHKPETIRVNV
Sbjct: 402 CEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNV 461
Query: 538 AGTLTLADVCRENGLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFFGSFYSKTKAMV 717
AGTLTLADVCREN LLMMNFATGCIFEYDA HPEGSGIGFKEEDKPNFFGSFYSKTKAMV
Sbjct: 462 AGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMV 521
Query: 718 ERASKR------IRQRMHLES 762
E + +R RM + S
Sbjct: 522 EELLREFDNVCTLRVRMPISS 542
Score = 282 bits (721), Expect = 3e-076
Identities = 138/153 (90%), Positives = 147/153 (96%)
Frame = +2
Query: 701 KQRQWWKELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLP 880
K + +ELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV+IPNSMTVLDELLP
Sbjct: 516 KTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLP 575
Query: 881 ISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPSFKWSNFTLEEQAKVIVAARSNN 1060
ISIEMAKRNLRGIWNFTNPGVVSHNEILEMYK+YIEP FKWSNFT+EEQAKVIVAARSNN
Sbjct: 576 ISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNN 635
Query: 1061 EMDGAKLSKEFPELLSIKDSLIKYVFEPNKRT* 1159
EMDG+KLSKEFPE+LSIK+SL+KYVFEPNKRT*
Sbjct: 636 EMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT* 668
>TAIR9_protein||AT1G78570.1 | Symbols: RHM1, ROL1, ATRHM1 | RHM1 (RHAMNOSE
BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/
catalytic | chr1:29550110-29552207 FORWARD
Length = 670
Score = 407 bits (1045), Expect = 8e-114
Identities = 199/264 (75%), Positives = 217/264 (82%), Gaps = 12/264 (4%)
Frame = +1
Query: 4 NRPFNDQRYFLDDQKLKKLGWAERTTWEEGLKKTMEWYTANPEWWGDVSGALLPHPRMLM 183
NRPFNDQRYFLDDQKLKKLGW+ERTTWEEGLKKTM+WYT NPEWWGDVSGALLPHPRMLM
Sbjct: 282 NRPFNDQRYFLDDQKLKKLGWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLM 341
Query: 184 MPGDRLCDSGDERKDA-----DGNQTFTVVTSTKSGGSGDNKTSLKFLIYGKTGWLGGLL 348
MPG R D ++ A +QT VV S +S G+ K SLKFLIYGKTGW+GGLL
Sbjct: 342 MPGGRHFDGSEDNSLAATLSEKPSQTHMVVPSQRSNGT-PQKPSLKFLIYGKTGWIGGLL 400
Query: 349 GKLCEKQGIVYEYGKGRLEDRASLVADIRRVKPTHVFNAAGLTGRPNVDWCESHKPETIR 528
GK+C+KQGI YEYGKGRLEDR+SL+ DI+ VKPTHVFN+AG+TGRPNVDWCESHK ETIR
Sbjct: 401 GKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIR 460
Query: 529 VNVAGTLTLADVCRENGLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFFGSFYSKTK 708
NVAGTLTLADVCRE+GLLMMNFATGCIFEYD HPEGSGIGFKEED PNF GSFYSKTK
Sbjct: 461 ANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTK 520
Query: 709 AMVERASKR------IRQRMHLES 762
AMVE K +R RM + S
Sbjct: 521 AMVEELLKEYDNVCTLRVRMPISS 544
Score = 267 bits (682), Expect = 1e-071
Identities = 133/174 (76%), Positives = 148/174 (85%), Gaps = 2/174 (1%)
Frame = +2
Query: 644 QGSALRKKTNRTSSVPST--QKQRQWWKELLREFDNVCTLRVRMPISSDLNNPRNFITKI 817
+GS + K T + + K + +ELL+E+DNVCTLRVRMPISSDLNNPRNFITKI
Sbjct: 497 EGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKI 556
Query: 818 SRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPSF 997
SRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWNFTNPGVVSHNEILEMY+ YI P F
Sbjct: 557 SRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEF 616
Query: 998 KWSNFTLEEQAKVIVAARSNNEMDGAKLSKEFPELLSIKDSLIKYVFEPNKRT* 1159
KW+NFTLEEQAKVIVA RSNNEMD +KL KEFPELLSIK+SLIKY + PNK+T*
Sbjct: 617 KWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT* 670
>TAIR9_protein||AT1G63000.1 | Symbols: NRS/ER, UER1 | NRS/ER
(NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE);
UDP-4-keto-6-deoxy-glucose-3,5-epimerase/
UDP-4-keto-rhamnose-4-keto-reductase/ dTDP-4-dehydrorhamnose
3,5-epimerase/ dTDP-4-dehydrorhamnose reductase |
chr1:23342510-23343859 FORWARD
Length = 302
Score = 253 bits (646), Expect = 2e-067
Identities = 120/167 (71%), Positives = 136/167 (81%), Gaps = 6/167 (3%)
Frame = +1
Query: 280 SGDNKTSLKFLIYGKTGWLGGLLGKLCEKQGIVYEYGKGRLEDRASLVADIRRVKPTHVF 459
+G + +S FLIYGKTGW+GGLLGKLCE QGI Y YG GRL+DR S+VADI VKP+HVF
Sbjct: 6 NGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVF 65
Query: 460 NAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENGLLMMNFATGCIFEYDAAHPE 639
NAAG+TGRPNVDWCESHK ETIR NVAGTLTLAD+CRE GL+++N+ATGCIFEYD+ HP
Sbjct: 66 NAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPL 125
Query: 640 GSGIGFKEEDKPNFFGSFYSKTKAMVERASKR------IRQRMHLES 762
GSGIGFKEED PNF GSFYSKTKAMVE K +R RM + S
Sbjct: 126 GSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISS 172
Score = 249 bits (634), Expect = 4e-066
Identities = 120/152 (78%), Positives = 136/152 (89%)
Frame = +2
Query: 701 KQRQWWKELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLP 880
K + +ELL+ ++NVCTLRVRMPISSDL NPRNFITKI+RY KVV+IPNSMT+LDELLP
Sbjct: 146 KTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYEKVVDIPNSMTILDELLP 205
Query: 881 ISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPSFKWSNFTLEEQAKVIVAARSNN 1060
ISIEMAKRNL GI+NFTNPGVVSHNEILEMY+ YI+PSF W NFTLEEQAKVIVA RSNN
Sbjct: 206 ISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNN 265
Query: 1061 EMDGAKLSKEFPELLSIKDSLIKYVFEPNKRT 1156
E+D KL EFPEL+SIK+SLIK+VFEPNK+T
Sbjct: 266 ELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,904,828,436
Number of Sequences: 33410
Number of Extensions: 12904828436
Number of Successful Extensions: 408053267
Number of sequences better than 0.0: 0
|
