Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN25231


BLASTX 7.6.2

Query= UN25231 /QuerySize=917
        (916 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G44560.1 | Symbols: VPS2.2 | VPS2.2 | chr5:179...    391   3e-109
TAIR9_protein||AT5G44560.2 | Symbols: VPS2.2 | VPS2.2 | chr5:179...    354   7e-098
TAIR9_protein||AT1G03950.1 | Symbols: VPS2.3 | VPS2.3 (VACUOLAR ...    279   2e-075
TAIR9_protein||AT2G06530.1 | Symbols: VPS2.1 | VPS2.1 | chr2:258...    170   2e-042

>TAIR9_protein||AT5G44560.1 | Symbols: VPS2.2 | VPS2.2 | chr5:17946081-17948222
        FORWARD

          Length = 223

 Score =  391 bits (1004), Expect = 3e-109
 Identities = 210/223 (94%), Positives = 217/223 (97%), Gaps = 2/223 (0%)
 Frame = +3

Query: 114 MNIFRKKTTPKDALRTSKREMSVATRGIEREISSLQMEEKRLVAEIKKTAKTGNEAATKI 293
           MNIF+KKTTPKDALRTSKREM+VATRGIEREI+SLQ+EEKRLVAEIKKTAKTGNEAATKI
Sbjct:   1 MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKI 60

Query: 294 LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK 473
           LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK
Sbjct:  61 LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK 120

Query: 474 QAKVIKDFQKQSAHLDMTIEMMSESIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS 653
           QAKVIKDFQKQSA LDMTIEMMSE+IDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS
Sbjct: 121 QAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS 180

Query: 654 APKGRIATKTAAPPAST--TSNSSESSEVDGLEKRLASLRRI* 776
           APKGRIATKTAAPPAST  T+ +SESSEVD LEKRLASLRRI*
Sbjct: 181 APKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLRRI* 223

>TAIR9_protein||AT5G44560.2 | Symbols: VPS2.2 | VPS2.2 | chr5:17946516-17948222
        FORWARD

          Length = 203

 Score =  354 bits (906), Expect = 7e-098
 Identities = 191/203 (94%), Positives = 197/203 (97%), Gaps = 2/203 (0%)
 Frame = +3

Query: 174 MSVATRGIEREISSLQMEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRA 353
           M+VATRGIEREI+SLQ+EEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRA
Sbjct:   1 MAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRA 60

Query: 354 QIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAHLDMTIE 533
           QIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSA LDMTIE
Sbjct:  61 QIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIE 120

Query: 534 MMSESIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPAST--T 707
           MMSE+IDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPAST  T
Sbjct: 121 MMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAAT 180

Query: 708 SNSSESSEVDGLEKRLASLRRI* 776
           + +SESSEVD LEKRLASLRRI*
Sbjct: 181 NKNSESSEVDELEKRLASLRRI* 203

>TAIR9_protein||AT1G03950.1 | Symbols: VPS2.3 | VPS2.3 (VACUOLAR PROTEIN
        SORTING-ASSOCIATED PROTEIN 2.3) | chr1:1011388-1013212 REVERSE

          Length = 211

 Score =  279 bits (712), Expect = 2e-075
 Identities = 140/197 (71%), Positives = 168/197 (85%)
 Frame = +3

Query: 114 MNIFRKKTTPKDALRTSKREMSVATRGIEREISSLQMEEKRLVAEIKKTAKTGNEAATKI 293
           MNIF KK  P++ LR SKREM+ ATRGIE+EI SLQ EEK+LV EIK+TAK+GNE ATKI
Sbjct:   1 MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKI 60

Query: 294 LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK 473
           LARQL+RLRQQI NLQGSRAQ+RG+ THTQA++A TS+++GM+GATKAM AM+K M P K
Sbjct:  61 LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAK 120

Query: 474 QAKVIKDFQKQSAHLDMTIEMMSESIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS 653
           QAKV+++FQKQSA +DMT EMMS+SID+ LD DEAE+ETEDLTNQVLDEIG+ +ASQLSS
Sbjct: 121 QAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSS 180

Query: 654 APKGRIATKTAAPPAST 704
           APKG+I  K A    S+
Sbjct: 181 APKGKIGGKKAEDVGSS 197

>TAIR9_protein||AT2G06530.1 | Symbols: VPS2.1 | VPS2.1 | chr2:2588740-2590285
        REVERSE

          Length = 226

 Score =  170 bits (429), Expect = 2e-042
 Identities = 89/223 (39%), Positives = 141/223 (63%), Gaps = 3/223 (1%)
 Frame = +3

Query: 117 NIFRKKTTPKDALRTSKREMSVATRGIEREISSLQMEEKRLVAEIKKTAKTGNEAATKIL 296
           +IF K+ TP + LR +KR +  + R IERE   LQ +EK+L+ EIKKTAK G   A K++
Sbjct:   4 SIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVM 63

Query: 297 ARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQ 476
           A+ L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+QM     
Sbjct:  64 AKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 123

Query: 477 AKVIKDFQKQSAHLDMTIEMMSESIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSA 656
            K++++F++Q+  ++M  E+M ++ID+ L+ DE EEETEDL +QVLDEIG+ +  +L +A
Sbjct: 124 QKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNA 183

Query: 657 PKGRIATKTAAPPA--STTSNSSESSEVDG-LEKRLASLRRI* 776
           P G +A   A      +  + + +S  +D  L+ RL +LR++*
Sbjct: 184 PSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRKM* 226

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,904,828,436
Number of Sequences: 33410
Number of Extensions: 12904828436
Number of Successful Extensions: 408053267
Number of sequences better than 0.0: 0