BLASTX 7.6.2
Query= UN25245 /QuerySize=597
(596 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G02610.1 | Symbols: | 60S ribosomal protein L... 223 8e-059
TAIR9_protein||AT2G39390.1 | Symbols: | 60S ribosomal protein L... 220 5e-058
TAIR9_protein||AT3G09500.1 | Symbols: | 60S ribosomal protein L... 218 2e-057
TAIR9_protein||AT3G55170.1 | Symbols: | 60S ribosomal protein L... 212 2e-055
TAIR9_protein||AT3G55170.2 | Symbols: | 60S ribosomal protein L... 212 2e-055
>TAIR9_protein||AT5G02610.1 | Symbols: | 60S ribosomal protein L35 (RPL35D) |
chr5:587611-588547 FORWARD
Length = 124
Score = 223 bits (567), Expect = 8e-059
Identities = 115/124 (92%), Positives = 121/124 (97%)
Frame = +1
Query: 49 MARIKVHELRERSKTDLQSQLQEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 228
MARIKVHELR++SKTDLQ+QL+EFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 229 ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKEMYFPLRKYA 408
ISQKQK ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ+SLKTEREKKKEMYFP+RKYA
Sbjct: 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120
Query: 409 IKV* 420
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT2G39390.1 | Symbols: | 60S ribosomal protein L35 (RPL35B) |
chr2:16450803-16451762 REVERSE
Length = 124
Score = 220 bits (560), Expect = 5e-058
Identities = 114/124 (91%), Positives = 118/124 (95%)
Frame = +1
Query: 49 MARIKVHELRERSKTDLQSQLQEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 228
MARIKVHELRE+SK DL QL+EFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 229 ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKEMYFPLRKYA 408
ISQKQK ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ+SLKTEREKKKEMYFP+RKYA
Sbjct: 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query: 409 IKV* 420
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT3G09500.1 | Symbols: | 60S ribosomal protein L35 (RPL35A) |
chr3:2917047-2917895 FORWARD
Length = 124
Score = 218 bits (555), Expect = 2e-057
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +1
Query: 49 MARIKVHELRERSKTDLQSQLQEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 228
MARIKVHELRE+SK+DLQ+QL+E KAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 229 ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKEMYFPLRKYA 408
SQKQK ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ+SLKTEREKKKEMYFP+RKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query: 409 IKV* 420
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT3G55170.1 | Symbols: | 60S ribosomal protein L35 (RPL35C) |
chr3:20453136-20454293 REVERSE
Length = 124
Score = 212 bits (538), Expect = 2e-055
Identities = 109/124 (87%), Positives = 117/124 (94%)
Frame = +1
Query: 49 MARIKVHELRERSKTDLQSQLQEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 228
MARIKVHELR++SK+DL +QL+E KAELA LRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 229 ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKEMYFPLRKYA 408
SQKQK ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ+SLKTEREKKK+MYFP+RKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120
Query: 409 IKV* 420
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT3G55170.2 | Symbols: | 60S ribosomal protein L35 (RPL35C) |
chr3:20453136-20454293 REVERSE
Length = 124
Score = 212 bits (538), Expect = 2e-055
Identities = 109/124 (87%), Positives = 117/124 (94%)
Frame = +1
Query: 49 MARIKVHELRERSKTDLQSQLQEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 228
MARIKVHELR++SK+DL +QL+E KAELA LRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 229 ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKEMYFPLRKYA 408
SQKQK ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQ+SLKTEREKKK+MYFP+RKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120
Query: 409 IKV* 420
IKV*
Sbjct: 121 IKV* 124
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,904,828,436
Number of Sequences: 33410
Number of Extensions: 12904828436
Number of Successful Extensions: 408053267
Number of sequences better than 0.0: 0
|