Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN25248


BLASTX 7.6.2

Query= UN25248 /QuerySize=450
        (449 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G27700.1 | Symbols:  | structural constituent ...    161   3e-040
TAIR9_protein||AT3G53890.1 | Symbols:  | 40S ribosomal protein S...    157   3e-039
TAIR9_protein||AT3G53890.2 | Symbols:  | 40S ribosomal protein S...    157   3e-039

>TAIR9_protein||AT5G27700.1 | Symbols:  | structural constituent of ribosome |
        chr5:9807541-9808048 REVERSE

          Length = 83

 Score =  161 bits (405), Expect = 3e-040
 Identities = 77/83 (92%), Positives = 79/83 (95%)
 Frame = -2

Query: 379 MQNEEGVVTELYIPRKCSATNRLITSKDHASVQLNIGHLDADGIYTGQFTTLALCGFVRA 200
           MQNEEG VTELYIPRKCSATNRLITSKDHASVQLNIGHLDA+G+YTGQFTT ALCGFVRA
Sbjct:   1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 199 QGDADSGVDRLWQKKKVEAKQQ* 131
           QGDADSGVDRLWQKKKVEAKQ *
Sbjct:  61 QGDADSGVDRLWQKKKVEAKQN* 83

>TAIR9_protein||AT3G53890.1 | Symbols:  | 40S ribosomal protein S21 (RPS21B) |
        chr3:19955582-19956049 REVERSE

          Length = 83

 Score =  157 bits (396), Expect = 3e-039
 Identities = 74/83 (89%), Positives = 79/83 (95%)
 Frame = -2

Query: 379 MQNEEGVVTELYIPRKCSATNRLITSKDHASVQLNIGHLDADGIYTGQFTTLALCGFVRA 200
           M+N+ G VTELYIPRKCSATNR+ITSKDHASVQLNIGHLDA+G+YTGQFTT ALCGFVRA
Sbjct:   1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 199 QGDADSGVDRLWQKKKVEAKQQ* 131
           QGDADSGVDRLWQKKKVEAKQQ*
Sbjct:  61 QGDADSGVDRLWQKKKVEAKQQ* 83

>TAIR9_protein||AT3G53890.2 | Symbols:  | 40S ribosomal protein S21 (RPS21B) |
        chr3:19955582-19956049 REVERSE

          Length = 83

 Score =  157 bits (396), Expect = 3e-039
 Identities = 74/83 (89%), Positives = 79/83 (95%)
 Frame = -2

Query: 379 MQNEEGVVTELYIPRKCSATNRLITSKDHASVQLNIGHLDADGIYTGQFTTLALCGFVRA 200
           M+N+ G VTELYIPRKCSATNR+ITSKDHASVQLNIGHLDA+G+YTGQFTT ALCGFVRA
Sbjct:   1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 199 QGDADSGVDRLWQKKKVEAKQQ* 131
           QGDADSGVDRLWQKKKVEAKQQ*
Sbjct:  61 QGDADSGVDRLWQKKKVEAKQQ* 83

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,904,828,436
Number of Sequences: 33410
Number of Extensions: 12904828436
Number of Successful Extensions: 408053267
Number of sequences better than 0.0: 0