BLASTX 7.6.2
Query= UN25279 /QuerySize=755
(754 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taur... 78 6e-014
sp|P12682|HMGB1_PIG High mobility group protein B1 OS=Sus scrofa... 77 8e-014
sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithr... 77 1e-013
sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Calliceb... 77 1e-013
sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis fa... 77 1e-013
sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus ca... 77 1e-013
sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sap... 77 1e-013
sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca f... 77 1e-013
sp|A9RA84|HMGB1_PAPAN High mobility group protein B1 OS=Papio an... 77 1e-013
sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) ... 75 4e-013
sp|P63158|HMGB1_MOUSE High mobility group protein B1 OS=Mus musc... 75 4e-013
sp|P63159|HMGB1_RAT High mobility group protein B1 OS=Rattus nor... 75 4e-013
sp|Q54F38|H3V1_DICDI Histone H3.v1 OS=Dictyostelium discoideum G... 54 8e-007
sp|P13816|GARP_PLAFF Glutamic acid-rich protein OS=Plasmodium fa... 53 2e-006
>sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taurus GN=HMGB1
PE=1 SV=3
Length = 215
Score = 78 bits (190), Expect = 6e-014
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+EEEEE+ D
Sbjct: 202 DEEDEEEEEDDD 213
>sp|P12682|HMGB1_PIG High mobility group protein B1 OS=Sus scrofa GN=HMGB1 PE=2
SV=3
Length = 215
Score = 77 bits (189), Expect = 8e-014
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 HPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+EEEEE+ D
Sbjct: 202 DEEDEEEEEDDD 213
>sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithrix jacchus
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 77 bits (187), Expect = 1e-013
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+E+EEE+ D
Sbjct: 202 DEEDEDEEEDDD 213
>sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Callicebus moloch
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 77 bits (187), Expect = 1e-013
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+E+EEE+ D
Sbjct: 202 DEEDEDEEEDDD 213
>sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis familiaris
GN=HMGB1 PE=2 SV=3
Length = 215
Score = 77 bits (187), Expect = 1e-013
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+E+EEE+ D
Sbjct: 202 DEEDEDEEEDDD 213
>sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus caballus GN=HMGB1
PE=2 SV=3
Length = 215
Score = 77 bits (187), Expect = 1e-013
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+E+EEE+ D
Sbjct: 202 DEEDEDEEEDDD 213
>sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sapiens GN=HMGB1
PE=1 SV=3
Length = 215
Score = 77 bits (187), Expect = 1e-013
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+E+EEE+ D
Sbjct: 202 DEEDEDEEEDDD 213
>sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca fascicularis
GN=HMGB1 PE=2 SV=3
Length = 215
Score = 77 bits (187), Expect = 1e-013
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+E+EEE+ D
Sbjct: 202 DEEDEDEEEDDD 213
>sp|A9RA84|HMGB1_PAPAN High mobility group protein B1 OS=Papio anubis GN=HMGB1
PE=3 SV=1
Length = 215
Score = 77 bits (187), Expect = 1e-013
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
DEE+E+EEE+ D
Sbjct: 202 DEEDEDEEEDDD 213
>sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) OS=Cricetulus
griseus GN=HMGB1 PE=1 SV=1
Length = 180
Score = 75 bits (183), Expect = 4e-013
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 47 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 106
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 107 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEE 166
Query: 221 DEEEEEEEEEGD 186
+EE+E+EEE+ D
Sbjct: 167 EEEDEDEEEDDD 178
>sp|P63158|HMGB1_MOUSE High mobility group protein B1 OS=Mus musculus GN=Hmgb1
PE=1 SV=2
Length = 215
Score = 75 bits (183), Expect = 4e-013
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
+EE+E+EEE+ D
Sbjct: 202 EEEDEDEEEDDD 213
>sp|P63159|HMGB1_RAT High mobility group protein B1 OS=Rattus norvegicus
GN=Hmgb1 PE=1 SV=2
Length = 215
Score = 75 bits (183), Expect = 4e-013
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 572 KSEIKR--RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKD-REISRMIGELWNKLNEQER 402
K E K+ +DP PK S + F +E ++K HPG ++++ +GE+WN ++
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 401 LVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEE 222
Y+ KA + KE+Y ++ YR K + V ++ ++ E E E+ EEEE
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEE 201
Query: 221 DEEEEEEEEEGD 186
+EE+E+EEE+ D
Sbjct: 202 EEEDEDEEEDDD 213
>sp|Q54F38|H3V1_DICDI Histone H3.v1 OS=Dictyostelium discoideum GN=H3v1 PE=3
SV=1
Length = 619
Score = 54 bits (129), Expect = 8e-007
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = -3
Query: 368 ERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEEDEEEEEEEEEG 189
+R +++E+ + + Q S+ ++ E+ E E EE EEEE+EEEEEEEEE
Sbjct: 208 QRKTSQIEEESDDDSSSQNNSSDQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 267
Query: 188 DSSGDSGESEPHSDAEMEEPSLTP--SGLNPNPNPS-EIVVAPKEKASDVVVMETS 30
+ + E E + E EE P SG P P+PS + + +++S V E+S
Sbjct: 268 EEEEEEEEEEEEEEEEEEEVREAPKRSGGKPLPSPSLSSIFSNYDESSSVASSESS 323
>sp|P13816|GARP_PLAFF Glutamic acid-rich protein OS=Plasmodium falciparum
(isolate FC27 / Papua New Guinea) GN=GARP PE=4 SV=1
Length = 678
Score = 53 bits (126), Expect = 2e-006
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -3
Query: 416 NEQERLVYQGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEE 237
N ++++ +A K+++ + ED +E+ + Q S V + E++ E E EE
Sbjct: 526 NHKKKMAKIEEAELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEE 585
Query: 236 AEEEEDEEEEEEEEEGDSSGDSGESEPHSDAEMEE 132
EEEE+EEEEEEEEE + D E E DAE +E
Sbjct: 586 EEEEEEEEEEEEEEEEEEEEDEDE-EDEDDAEEDE 619
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,282,147,502
Number of Sequences: 518415
Number of Extensions: 106282147502
Number of Successful Extensions: 672117376
Number of sequences better than 0.0: 0
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