BLASTX 7.6.2
Query= UN25279 /QuerySize=755
(754 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G04880.1 | Symbols: | high mobility group (HM... 354 4e-098
TAIR9_protein||AT1G76110.1 | Symbols: | high mobility group (HM... 119 2e-027
TAIR9_protein||AT3G13350.1 | Symbols: | high mobility group (HM... 101 5e-022
TAIR9_protein||AT1G55650.1 | Symbols: | high mobility group (HM... 66 2e-011
>TAIR9_protein||AT1G04880.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr1:1376106-1378264 REVERSE
Length = 449
Score = 354 bits (907), Expect = 4e-098
Identities = 189/251 (75%), Positives = 209/251 (83%), Gaps = 17/251 (6%)
Frame = -3
Query: 752 MGSEKLKGVLYQLVPENTVAAHQTPQQSHHGGFPNTWNNNGPYPQGVVTGGVRKRRRRRK 573
+GSE+LKGVLYQL+P+NTV ++QTPQQS HG PNT N + PQG V GGV KRRRRRK
Sbjct: 196 IGSEQLKGVLYQLLPQNTV-SYQTPQQS-HGVLPNTLNISA-NPQG-VAGGVTKRRRRRK 251
Query: 572 KSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNEQERLVY 393
KSEIKRRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKLNE E+L+Y
Sbjct: 252 KSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIY 311
Query: 392 QGKAMEDKERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEEDEE 213
QGKAMEDKERYRTEMEDYREK + GQLISNAVPLQQRLPEQNV++AE + +E
Sbjct: 312 QGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADL------PIDE 365
Query: 212 EEEEEEEGDSSGDSGESEPH------SDAEMEEPSLTPSGLNPNPNPSEIVVAPKEKASD 51
EE++EEGDSSG SGESEPH +D E+EEPSL PSG N NPNP+EIVVAPKEK D
Sbjct: 366 VEEDDEEGDSSGSSGESEPHDDQSIETDPELEEPSLNPSGPNLNPNPTEIVVAPKEKNGD 425
Query: 50 VVVMETSPGKK 18
VVMETSP KK
Sbjct: 426 -VVMETSPLKK 435
>TAIR9_protein||AT1G76110.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr1:28555287-28557465 REVERSE
Length = 339
Score = 119 bits (297), Expect = 2e-027
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Frame = -3
Query: 653 PNTWNNNGPYPQGVVTGGVRKRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPL 474
P NN P V TG R+R +R++S +R DP +PKPNRSGYNFFFAE+H +LK L
Sbjct: 219 PTAVLNNAVVPY-VETGRRRRRLGKRRRSR-RREDPNYPKPNRSGYNFFFAEKHCKLKSL 276
Query: 473 HPGKDREISRMIGELWNKLNEQERLVYQGKAMEDKERYRTEMEDYREKLR 324
+P K+RE +++IGE W+ L+ +ER+VYQ ++DKERY+ E+ +YRE LR
Sbjct: 277 YPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLR 326
>TAIR9_protein||AT3G13350.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr3:4335721-4337804 REVERSE
Length = 320
Score = 101 bits (251), Expect = 5e-022
Identities = 48/95 (50%), Positives = 66/95 (69%)
Frame = -3
Query: 590 RRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNE 411
+RR RKKS++ D PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L E
Sbjct: 221 QRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTE 280
Query: 410 QERLVYQGKAMEDKERYRTEMEDYREKLRTGQLIS 306
E+ VYQ K ++D ERYR EM +Y+ +G S
Sbjct: 281 SEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 315
>TAIR9_protein||AT1G55650.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr1:20796340-20798481 FORWARD
Length = 338
Score = 66 bits (159), Expect = 2e-011
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -3
Query: 587 RRRRKKSEIKRRDP-AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNE 411
+R +KK++ + D PK R+GYNFF AEQ R+K + G+ + G +W L+E
Sbjct: 198 KRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSE 257
Query: 410 QERLVYQGKAMEDKERYRTEMEDYREKLRT 321
+R VY K+ ED +RY+ E+ YR + +
Sbjct: 258 SDRKVYYEKSREDGKRYKMEILQYRSLMES 287
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,996,749,998
Number of Sequences: 33410
Number of Extensions: 12996749998
Number of Successful Extensions: 413239888
Number of sequences better than 0.0: 0
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