BLASTX 7.6.2
Query= UN25309 /QuerySize=791
(790 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18394631|ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidops... 233 4e-059
gi|297844814|ref|XP_002890288.1| rhomboid family protein [Arabid... 222 6e-056
gi|225456573|ref|XP_002265768.1| PREDICTED: hypothetical protein... 80 2e-013
gi|297734076|emb|CBI15323.3| unnamed protein product [Vitis vini... 80 2e-013
gi|147790859|emb|CAN61730.1| hypothetical protein VITISV_019858 ... 72 8e-011
gi|224092178|ref|XP_002309495.1| predicted protein [Populus tric... 72 8e-011
>gi|18394631|ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]
Length = 336
Score = 233 bits (592), Expect = 4e-059
Identities = 131/212 (61%), Positives = 155/212 (73%), Gaps = 13/212 (6%)
Frame = +3
Query: 177 MNSIFSRRVVVDSSSRLTKLLANPPNH----HSSFTSIYRPSQTRHFRTHYLPSTPSPPL 344
M +IF+RRVVVDSSSRLTKLLANP H +FTS+Y+P+Q+RHFRTHYLPS+PS P
Sbjct: 1 MKAIFNRRVVVDSSSRLTKLLANPTTHSHLNRQTFTSLYKPNQSRHFRTHYLPSSPSSP- 59
Query: 345 PASRFDPSLLWRSEKIRGFFAGALTKNKSVKLGNLVESKVVFFRSQFPRKGFEFGGYSG- 521
P SRFDPS LWRSEKIRGFFA AL NK+VKLGNLVES+V F SQFP+KGFEF +SG
Sbjct: 60 PVSRFDPSQLWRSEKIRGFFASAL-GNKAVKLGNLVESRVGFIGSQFPKKGFEFQRFSGF 118
Query: 522 -RRGWKNWLQGLSSNDVVLGLLLANAGVFIMWRVSTNVS**IIS*YRWTISPVD---VYT 689
RRGWK+WLQGLS DVVLGL++ANAGVF+MWRV +++ + ++ ++T
Sbjct: 119 QRRGWKHWLQGLSDRDVVLGLVIANAGVFVMWRVFNQQF--MMNNFMISLDNFKSGRLHT 176
Query: 690 L**LRIQSY*YWTYRLNMIGLYFFGTSIARNF 785
L NMIGLYFFGTSIARNF
Sbjct: 177 LITSAFSHIDIGHIVSNMIGLYFFGTSIARNF 208
Score = 59 bits (142), Expect = 6e-007
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Frame = +2
Query: 488 QKGFRVRRLF------WEAWMEELASRVII**RCSWITIS*RWCLYHVACFDQRFMMNNF 649
+KGF +R W+ W++ L+ R ++ + I+ F+Q+FMMNNF
Sbjct: 107 KKGFEFQRFSGFQRRGWKHWLQGLSDRDVV----LGLVIANAGVFVMWRVFNQQFMMNNF 162
Query: 650 MISLDNFTSGRLHTLITS 703
MISLDNF SGRLHTLITS
Sbjct: 163 MISLDNFKSGRLHTLITS 180
>gi|297844814|ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 336
Score = 222 bits (564), Expect = 6e-056
Identities = 129/210 (61%), Positives = 149/210 (70%), Gaps = 13/210 (6%)
Frame = +3
Query: 177 MNSIFSRRVVVDSSSRLTKLLANPPNH----HSSFTSIYRPSQTRHFRTHYLPSTPSPPL 344
M +IF+RRVVVDSSSRLTKLL NP H +F S+Y+P+Q+RHFRTHYLPSTPS P
Sbjct: 1 MKAIFNRRVVVDSSSRLTKLLTNPTTHSHPNRQTFISLYKPNQSRHFRTHYLPSTPSSP- 59
Query: 345 PASRFDPSLLWRSEKIRGFFAGALTKNKSVKLGNLVESKVVFFRSQFPRKGFEFGGYSG- 521
P SRFDPS LWRSE IRGFFA AL NK+VKLGNLVES+V F SQFP+KGFEF +SG
Sbjct: 60 PVSRFDPSQLWRSETIRGFFATAL-GNKAVKLGNLVESRVGFIGSQFPKKGFEFERFSGF 118
Query: 522 -RRGWKNWLQGLSSNDVVLGLLLANAGVFIMWRVSTN---VS**IIS*YRWTISPVDVYT 689
RRGWK+WLQGLS DVVLGL++AN GVF+MWRV + +IS +T ++T
Sbjct: 119 QRRGWKHWLQGLSDRDVVLGLVIANTGVFMMWRVFNQQFMMKNFMISLDNFTSG--RLHT 176
Query: 690 L**LRIQSY*YWTYRLNMIGLYFFGTSIAR 779
L NMIGLYFFGTSIAR
Sbjct: 177 LITSAFSHIDIGHIVSNMIGLYFFGTSIAR 206
Score = 59 bits (141), Expect = 7e-007
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Frame = +2
Query: 488 QKGFRVRRLF------WEAWMEELASRVII**RCSWITIS*RWCLYHVACFDQRFMMNNF 649
+KGF R W+ W++ L+ R ++ + I+ F+Q+FMM NF
Sbjct: 107 KKGFEFERFSGFQRRGWKHWLQGLSDRDVV----LGLVIANTGVFMMWRVFNQQFMMKNF 162
Query: 650 MISLDNFTSGRLHTLITS 703
MISLDNFTSGRLHTLITS
Sbjct: 163 MISLDNFTSGRLHTLITS 180
>gi|225456573|ref|XP_002265768.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 333
Score = 80 bits (197), Expect = 2e-013
Identities = 56/140 (40%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Frame = +3
Query: 390 IRGFFAGALTKNKSVKLGNLVESKVVFFRSQFPRKGFEFGGY--SGRRGWKNWLQGLSSN 563
++ F AL K S L S+V F R+QFPR+ F F S R W++WL GLS+N
Sbjct: 78 LKQFLPTALLKGSS---KTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTN 134
Query: 564 DVVLGLLLANAGVFIMWRVSTNVS**IIS*YRWTISPVD-----VYTL**LRIQSY*YWT 728
DVVLGL++AN VF++WR+S + +TIS + ++TL
Sbjct: 135 DVVLGLIIANVAVFMLWRISDH----RFMLNNFTISLDNFKSGRIHTLITSAFSHIDIGH 190
Query: 729 YRLNMIGLYFFGTSIARNFG 788
NMIGLYFFG +I R FG
Sbjct: 191 LISNMIGLYFFGMNIGRVFG 210
>gi|297734076|emb|CBI15323.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 80 bits (197), Expect = 2e-013
Identities = 56/140 (40%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Frame = +3
Query: 390 IRGFFAGALTKNKSVKLGNLVESKVVFFRSQFPRKGFEFGGY--SGRRGWKNWLQGLSSN 563
++ F AL K S L S+V F R+QFPR+ F F S R W++WL GLS+N
Sbjct: 107 LKQFLPTALLKGSS---KTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTN 163
Query: 564 DVVLGLLLANAGVFIMWRVSTNVS**IIS*YRWTISPVD-----VYTL**LRIQSY*YWT 728
DVVLGL++AN VF++WR+S + +TIS + ++TL
Sbjct: 164 DVVLGLIIANVAVFMLWRISDH----RFMLNNFTISLDNFKSGRIHTLITSAFSHIDIGH 219
Query: 729 YRLNMIGLYFFGTSIARNFG 788
NMIGLYFFG +I R FG
Sbjct: 220 LISNMIGLYFFGMNIGRVFG 239
>gi|147790859|emb|CAN61730.1| hypothetical protein VITISV_019858 [Vitis
vinifera]
Length = 293
Score = 72 bits (175), Expect = 8e-011
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = +3
Query: 390 IRGFFAGALTKNKSVKLGNLVESKVVFFRSQFPRKGFEFGGY--SGRRGWKNWLQGLSSN 563
++ F AL K S L S+V F R+QFPR+ F F S R W++WL GLS+N
Sbjct: 78 LKQFLPTALLKGSS---KTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTN 134
Query: 564 DVVLGLLLANAGVFIMWRVS 623
DVVLGL++AN VF++WR+S
Sbjct: 135 DVVLGLIIANVAVFMLWRIS 154
>gi|224092178|ref|XP_002309495.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 72 bits (175), Expect = 8e-011
Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Frame = +3
Query: 444 NLVESKVVFFRSQFPRKGFEFGGY---SGRRGWKNWLQGLSSNDVVLGLLLANAGVFIMW 614
NL + KV FF ++F R G+ + S RRGW++W LS+++VVLGL++ANA VF++W
Sbjct: 1 NLTDCKVGFFIARFAR-GYSWSNLSLGSNRRGWRSWFNRLSADNVVLGLIIANAAVFMLW 59
Query: 615 RVSTN---VS**IIS*YRWTISPVDVYTL**LRIQSY*YWTYRLNMIGLYFFGTSIARNF 785
R+ + +IS + ++TL NMIGLYFFGT+IAR F
Sbjct: 60 RIEDQKFMMENFMISLDNFRSG--RIHTLVTSAFSHIDIGHIAFNMIGLYFFGTNIARTF 117
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,061,447,628,928
Number of Sequences: 15229318
Number of Extensions: 3061447628928
Number of Successful Extensions: 717782310
Number of sequences better than 0.0: 0
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