BLASTX 7.6.2
Query= UN25353 /QuerySize=540
(539 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297852864|ref|XP_002894313.1| photosystem II 5 kD protein [Ar... 168 4e-040
gi|312283313|dbj|BAJ34522.1| unnamed protein product [Thellungie... 164 6e-039
gi|18403499|ref|NP_564589.1| Photosystem II 5 kD protein [Arabid... 163 1e-038
gi|21537121|gb|AAM61462.1| photosystem II [Arabidopsis thaliana] 160 9e-038
gi|297789402|ref|XP_002862672.1| hypothetical protein ARALYDRAFT... 141 8e-032
gi|18402859|ref|NP_566674.1| photosystem II subunit T [Arabidops... 139 3e-031
gi|62320142|dbj|BAD94339.1| hypothetical protein [Arabidopsis th... 138 5e-031
gi|1465366|emb|CAA66701.1| photosystem II [Arabidopsis thaliana] 134 9e-030
gi|90186625|gb|ABD91572.1| unknown [Brassica rapa] 133 1e-029
gi|2129671|pir||S71280 photosystem II protein psbT - Arabidopsis... 116 3e-024
gi|224106185|ref|XP_002314076.1| predicted protein [Populus tric... 96 2e-018
gi|255632908|gb|ACU16808.1| unknown [Glycine max] 86 2e-015
gi|255628337|gb|ACU14513.1| unknown [Glycine max] 85 5e-015
gi|400198|sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 ... 83 2e-014
gi|186490176|ref|NP_001117466.1| uncharacterized protein [Arabid... 70 1e-010
gi|326505794|dbj|BAJ91136.1| predicted protein [Hordeum vulgare ... 66 2e-009
gi|242062124|ref|XP_002452351.1| hypothetical protein SORBIDRAFT... 61 8e-008
>gi|297852864|ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis
lyrata subsp. lyrata]
Length = 106
Score = 168 bits (424), Expect = 4e-040
Identities = 90/107 (84%), Positives = 98/107 (91%), Gaps = 6/107 (5%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNTT-----KQEQSMKMRRDLMF 316
MASMTMTSSFLPT+SKLPA ISGN+RRSLTVVKAS S+NTT KQEQSMKMRRDL+F
Sbjct: 1 MASMTMTSSFLPTVSKLPANISGNSRRSLTVVKASASENTTSLENKKQEQSMKMRRDLVF 60
Query: 315 TAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
TAAAAAVC+LA+VAMA +EEPKRGTEAAKKK APVCVTMPTA+ICRN
Sbjct: 61 TAAAAAVCSLAKVAMA-DEEPKRGTEAAKKKYAPVCVTMPTARICRN 106
>gi|312283313|dbj|BAJ34522.1| unnamed protein product [Thellungiella halophila]
Length = 106
Score = 164 bits (414), Expect = 6e-039
Identities = 87/107 (81%), Positives = 96/107 (89%), Gaps = 6/107 (5%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNTT-----KQEQSMKMRRDLMF 316
MASMTMTSSFLP +SKLP I+G+NRRSLTVVKASTS+NTT KQEQSMKMRRD++F
Sbjct: 1 MASMTMTSSFLPAVSKLPTAITGSNRRSLTVVKASTSENTTSLENRKQEQSMKMRRDMVF 60
Query: 315 TAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
TAAAAAVC+LA+ AMA +EEPKRGTEAAKKK APVCVTMPTAKICRN
Sbjct: 61 TAAAAAVCSLAKAAMA-DEEPKRGTEAAKKKYAPVCVTMPTAKICRN 106
>gi|18403499|ref|NP_564589.1| Photosystem II 5 kD protein [Arabidopsis
thaliana]
Length = 106
Score = 163 bits (411), Expect = 1e-038
Identities = 88/107 (82%), Positives = 96/107 (89%), Gaps = 6/107 (5%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNTT-----KQEQSMKMRRDLMF 316
MASMTMTSSFLPT+S LPA IS N+RRSLTVVKAS S+NTT KQEQSMKMRRDL+F
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLENKKQEQSMKMRRDLVF 60
Query: 315 TAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
TAAAAAVC+LA+VAMA ++EPKRGTEAAKKK APVCVTMPTAKICRN
Sbjct: 61 TAAAAAVCSLAKVAMA-DDEPKRGTEAAKKKYAPVCVTMPTAKICRN 106
>gi|21537121|gb|AAM61462.1| photosystem II [Arabidopsis thaliana]
Length = 106
Score = 160 bits (404), Expect = 9e-038
Identities = 86/107 (80%), Positives = 96/107 (89%), Gaps = 6/107 (5%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNTT-----KQEQSMKMRRDLMF 316
MASMTMTSSFLPT+S LPA IS N+RRSLTVVKAS S+NTT +QEQSMKMRRDL+F
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLENKEQEQSMKMRRDLVF 60
Query: 315 TAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
TAAAAAVC+LA+VAMA ++EPKRGTEAAKKK APVCVTMPTA+ICRN
Sbjct: 61 TAAAAAVCSLAKVAMA-DDEPKRGTEAAKKKYAPVCVTMPTARICRN 106
>gi|297789402|ref|XP_002862672.1| hypothetical protein ARALYDRAFT_920397
[Arabidopsis lyrata subsp. lyrata]
Length = 103
Score = 141 bits (353), Expect = 8e-032
Identities = 76/105 (72%), Positives = 87/105 (82%), Gaps = 7/105 (6%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNT----TKQEQSMKMRRDLMFT 313
MASMTMT++FLP ++KLP+ G R L+VV+ASTSDNT K++ S MRRDLMFT
Sbjct: 1 MASMTMTATFLPAIAKLPSATGG---RRLSVVRASTSDNTPSLQVKEQCSTTMRRDLMFT 57
Query: 312 AAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICR 178
AAAAAVC+LA+VAMAEEEEPKRGTEAAKKK A VCVTMPTAKICR
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102
>gi|18402859|ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]
Length = 103
Score = 139 bits (348), Expect = 3e-031
Identities = 74/105 (70%), Positives = 86/105 (81%), Gaps = 7/105 (6%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNT----TKQEQSMKMRRDLMFT 313
MASMTMT++F P ++K+P+ G R L+VV+ASTSDNT K++ S MRRDLMFT
Sbjct: 1 MASMTMTATFFPAVAKVPSATGG---RRLSVVRASTSDNTPSLEVKEQSSTTMRRDLMFT 57
Query: 312 AAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICR 178
AAAAAVC+LA+VAMAEEEEPKRGTEAAKKK A VCVTMPTAKICR
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102
>gi|62320142|dbj|BAD94339.1| hypothetical protein [Arabidopsis thaliana]
Length = 108
Score = 138 bits (346), Expect = 5e-031
Identities = 81/101 (80%), Positives = 84/101 (83%), Gaps = 6/101 (5%)
Frame = +2
Query: 194 VGIVTQTGAHFFLAASVPLLGSSSSAMATSAKVHTAAAAAVNIRSLLIFMLCSC-----L 358
VGIVTQTGA+FFLAASVPL G SSSA+AT AK HTAAAAAV RSLLIFMLCSC L
Sbjct: 1 VGIVTQTGAYFFLAASVPLFG-SSSAIATLAKEHTAAAAAVKTRSLLIFMLCSCFLFSKL 59
Query: 359 VVLSLVEALTTVRLRLLLPEMVAGSFERVGRNEDVMVIEAI 481
VV SL EALTTVRLRLLL EM AG FE VGRNEDVMVI+AI
Sbjct: 60 VVFSLPEALTTVRLRLLLLEMFAGRFETVGRNEDVMVIDAI 100
>gi|1465366|emb|CAA66701.1| photosystem II [Arabidopsis thaliana]
Length = 103
Score = 134 bits (335), Expect = 9e-030
Identities = 72/105 (68%), Positives = 84/105 (80%), Gaps = 7/105 (6%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNT----TKQEQSMKMRRDLMFT 313
MASMTMT++F P ++K+P+ G R L+VV+ASTSDNT K++ S MRRDLMFT
Sbjct: 1 MASMTMTATFFPAVAKVPSATGG---RRLSVVRASTSDNTPSLEVKEQSSTTMRRDLMFT 57
Query: 312 AAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICR 178
AAAAAVC+LA+VAMAEEEEPKRGTEA KKK A VCVTM TAKICR
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAGKKKYAQVCVTMRTAKICR 102
>gi|90186625|gb|ABD91572.1| unknown [Brassica rapa]
Length = 106
Score = 133 bits (334), Expect = 1e-029
Identities = 74/108 (68%), Positives = 87/108 (80%), Gaps = 10/108 (9%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNT------TKQEQ-SMKMRRDL 322
MAS+TMT++FLP ++KLP+ SG R ++VV+AS S+NT TK+EQ S MRRDL
Sbjct: 1 MASITMTATFLPAVAKLPSATSG---RRMSVVRASKSENTTSLEVKTKEEQSSTTMRRDL 57
Query: 321 MFTAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICR 178
MFTAAAAAVC LA+ AMA+EEEPKRGTEAAKKK A VCVTMPTAKICR
Sbjct: 58 MFTAAAAAVCALAKAAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICR 105
>gi|2129671|pir||S71280 photosystem II protein psbT - Arabidopsis thaliana
Length = 102
Score = 116 bits (288), Expect = 3e-024
Identities = 60/101 (59%), Positives = 76/101 (75%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNTTKQEQSMKMRRDLMFTAAAA 301
MASMTMT++F P ++K+P+ + RS ++ + + ++ + MRRDLMFTAAAA
Sbjct: 1 MASMTMTATFFPAVAKVPSATATKALRSQSLHERQHTQLRSQGTEQHHMRRDLMFTAAAA 60
Query: 300 AVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICR 178
AVC+LA+VAMAEEEEPKRGTEA KKK A VCVTM TAKICR
Sbjct: 61 AVCSLAKVAMAEEEEPKRGTEAGKKKYAQVCVTMRTAKICR 101
>gi|224106185|ref|XP_002314076.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 96 bits (238), Expect = 2e-018
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 11/109 (10%)
Frame = -3
Query: 480 MASMTMTSSFL--PTLSKLPATISGNNRRSLTVVKASTSD-----NTTKQEQSMKMRRDL 322
MAS+TMT+SFL ++K P+T RR L V KAS + +E+S RRDL
Sbjct: 1 MASITMTASFLTGSAMAKQPST---TPRRGLIVAKASRATEGVNVEMKNREESSGGRRDL 57
Query: 321 MFTAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
MF AAAAA ++A VA+A +EEP+RGT AKKK AP+CVTMPTA+ICRN
Sbjct: 58 MFAAAAAAAYSIARVAIA-DEEPRRGTPEAKKKYAPICVTMPTARICRN 105
>gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 86 bits (211), Expect = 2e-015
Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNTTKQEQSMKM-----RRDLMF 316
MAS TMT+S L + + + RRSL VV A+ + K M RR+LMF
Sbjct: 1 MASFTMTASILGSPTVTNRSAVATQRRSL-VVNAAKAVEAEKVSYDNDMDGSNGRRNLMF 59
Query: 315 TAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
AAAAAVC++A +A+A +EPK GT AKKK AP+CVTMPTA+ICRN
Sbjct: 60 AAAAAAVCSVAGMAVA--DEPKPGTPEAKKKYAPICVTMPTARICRN 104
>gi|255628337|gb|ACU14513.1| unknown [Glycine max]
Length = 104
Score = 85 bits (208), Expect = 5e-015
Identities = 51/105 (48%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTS---DNTTKQEQSMKMRRDLMFTA 310
MAS TMT+S L + + + RRS+ V AS S + + RR+LMF
Sbjct: 1 MASFTMTASILGCPAVTNRSAAATQRRSVVVNAASKSVEGEKVSYDNNGSNARRNLMFAT 60
Query: 309 AAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
AAAAVC+ A MA +EPK GT AKKK APVCVT PTA+ICRN
Sbjct: 61 AAAAVCSFA-AGMALADEPKPGTSEAKKKYAPVCVTNPTARICRN 104
>gi|400198|sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein,
chloroplastic; Short=PSII-T; AltName: Full=Light-regulated unknown 11
kDa protein; Flags: Precursor
Length = 105
Score = 83 bits (203), Expect = 2e-014
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 11/109 (10%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKA-------STSDNTTKQEQSMKMRRDL 322
MAS+TMT+SFL T + + RR L V A S + ++ + RR++
Sbjct: 1 MASITMTTSFLSTTNLTKGSPRITQRR-LVVANAAKGAQVESVQMSGERKTEGNNGRREM 59
Query: 321 MFTAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
MF AAAAA+C++A VA A EPKRG+ AKK APVCVTMPTA+ICRN
Sbjct: 60 MFAAAAAAICSVAGVATA---EPKRGSAEAKKAYAPVCVTMPTARICRN 105
>gi|186490176|ref|NP_001117466.1| uncharacterized protein [Arabidopsis
thaliana]
Length = 60
Score = 70 bits (170), Expect = 1e-010
Identities = 40/52 (76%), Positives = 41/52 (78%), Gaps = 5/52 (9%)
Frame = +2
Query: 341 MLCSC-----LVVLSLVEALTTVRLRLLLPEMVAGSFERVGRNEDVMVIEAI 481
MLCSC LVV SL EALTTVRLRLLL EM AG FE VGRNEDVMVI+AI
Sbjct: 1 MLCSCFLFSKLVVFSLPEALTTVRLRLLLLEMFAGRFETVGRNEDVMVIDAI 52
>gi|326505794|dbj|BAJ91136.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 106
Score = 66 bits (159), Expect = 2e-009
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Frame = -3
Query: 480 MASMTMTSSFLPTLSKLPATISGNNRRSLTVVKASTSDNTTKQ-------EQSMKMRRDL 322
MAS+TM +S ++ + RR L V +A+ + + E + RR +
Sbjct: 1 MASLTMMASLSAAVA--VDRRAAAPRRGLVVARAAKVERQQEPAAKLAAVEPATDGRRAV 58
Query: 321 MFTAAAAAVCTLAEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICRN 175
+F AAAAAV + A A E + K+GT AKKK APVC+TMPTAKIC N
Sbjct: 59 VFAAAAAAVSAIGTAAFA-ESDVKKGTPEAKKKYAPVCITMPTAKICHN 106
>gi|242062124|ref|XP_002452351.1| hypothetical protein SORBIDRAFT_04g024130
[Sorghum bicolor]
Length = 152
Score = 61 bits (146), Expect = 8e-008
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Frame = -3
Query: 351 EQSMKMRRDLMFTAAAAAVCTL--AEVAMAEEEEPKRGTEAAKKKCAPVCVTMPTAKICR 178
E+ + RR +M AAAAAV + A AMA +PK+G+ AKKK AP+CVTMPTAKIC
Sbjct: 95 EEPAEGRRAVMLAAAAAAVAAIGGAGAAMA---DPKKGSPEAKKKYAPICVTMPTAKICH 151
Query: 177 N 175
N
Sbjct: 152 N 152
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,061,447,628,928
Number of Sequences: 15229318
Number of Extensions: 3061447628928
Number of Successful Extensions: 717782310
Number of sequences better than 0.0: 0
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