BLASTX 7.6.2
Query= UN25392 /QuerySize=1028
(1027 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 320 1e-087
TAIR9_protein||AT3G44750.1 | Symbols: HD2A, ATHD2A, HDA3, HDT1 |... 175 4e-044
TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 168 9e-042
TAIR9_protein||AT5G03740.1 | Symbols: HD2C, HDT3 | HD2C (HISTONE... 164 1e-040
TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-rel... 64 2e-010
TAIR9_protein||AT1G48400.1 | Symbols: | F-box family protein | ... 57 2e-008
TAIR9_protein||AT5G37430.1 | Symbols: | unknown protein | chr5:... 55 6e-008
>TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 307
Score = 320 bits (818), Expect = 1e-087
Identities = 191/311 (61%), Positives = 216/311 (69%), Gaps = 46/311 (14%)
Frame = +3
Query: 60 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQG 236
MEFWGV V + KV P+ ++L+H+SQASLD K GE+ +L VTV G KLV+GTLSQ
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 237 NIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTPEDEEDFSDSEEEEEAAAVPA--- 407
PQISFDLVF+KEFELSHS +VHF+GYKSPN +D+ SD E+ EA PA
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 408 --------AVTVKADSKPKAKPAE----EVKPESDDDDDDSDEEDDSEEDGSDSEKGMDV 551
A VKAD+KPKAKPAE E KPES D++D+SD+ED+SEED DSEKGMDV
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPES-DEEDESDDEDESEED-DDSEKGMDV 178
Query: 552 DEDDSED--EDDSED-EDDETSKKPEVSNKKRPNESAASKASVSAKKAKP---------- 692
DEDDS+D E+DSED E++ET KKPE NKKRPNES SK VS KKAKP
Sbjct: 179 DEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNES-VSKTPVSGKKAKPAAAPASTPQK 237
Query: 693 ----------ATPHPAKKGGKSPVNANQSPKSGGQSPSGGGANKKQFNSGK*F-GSNNKG 839
ATPHPAKKGGKSPVNANQSPKSGGQS SGG NKK FNSGK F GSNNKG
Sbjct: 238 TEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQS-SGGNNNKKPFNSGKQFGGSNNKG 296
Query: 840 --KGKGKGRA* 866
KGKGKGRA*
Sbjct: 297 SNKGKGKGRA* 307
>TAIR9_protein||AT3G44750.1 | Symbols: HD2A, ATHD2A, HDA3, HDT1 | HDA3 (HISTONE
DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion
binding | chr3:16298045-16299585 FORWARD
Length = 246
Score = 175 bits (443), Expect = 4e-044
Identities = 110/238 (46%), Positives = 141/238 (59%), Gaps = 12/238 (5%)
Frame = +3
Query: 60 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 233
MEFWG+EV +GK V V P+ LIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 234 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTPEDEEDFSDSEEEEEAAAVPAAV 413
NIPQ+ DLVF+KEFELSH+ GSV+FVGYK+PN + + +S+ EEEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI--EPQGYSEEEEEEE-EEVPAGN 117
Query: 414 TVKADSKPKAKPAEEVKPESDDDDDDSDEE--DDSEEDGSDSEKGMDVDEDDSEDEDDSE 587
KA +KPKAKPA EVKP DD++D+SD + D+ + DG DSE+ +E + S+
Sbjct: 118 AAKAVAKPKAKPA-EVKPAVDDEEDESDSDGMDEDDSDGEDSEE----EEPTPKKPASSK 172
Query: 588 DEDDETSKKPEVSNKKRPNESAASKASVSAKKAKPATPHPAKKGGKSPVNANQSPKSG 761
+ET+ K VS KK K K K A P S + ++ SG
Sbjct: 173 KRANETTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKSASQVSCGSCKKTFNSG 230
>TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 306
Score = 168 bits (423), Expect = 9e-042
Identities = 104/258 (40%), Positives = 141/258 (54%), Gaps = 27/258 (10%)
Frame = +3
Query: 60 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQG 236
MEFWGV V + KV P+ ++L+H+SQASLD K GE+ +L VTV G KLV+GTLSQ
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 237 NIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTPEDEEDFSDSEEEEEAAAVPAAVT 416
PQISFDLVF+KEFELSHS +VHF+GYKSPN +D+ SD E+ EA PA
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 417 VKADSKP-----KAKPAEEVKPESDDDDDDSDEEDDSEEDGSDSEKGMDVDEDDSEDEDD 581
V A+ KA + KP ++ E D EED SD DED+SE++DD
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESD--EEDESD-------DEDESEEDDD 171
Query: 582 SE-----DEDDETSKKPEVSNKKRPNESAASKASVSAKKAKPATPHPAKKGGKSPVNANQ 746
SE DEDD + E S + E+ ++ K+ P + K+PV+ +
Sbjct: 172 SEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKR-------PNESVSKTPVSGKK 224
Query: 747 SPKSGGQSPSGGGANKKQ 800
+ + + + KK+
Sbjct: 225 AKPAAAPASTPQKTEKKK 242
Score = 136 bits (340), Expect = 4e-032
Identities = 88/163 (53%), Positives = 104/163 (63%), Gaps = 17/163 (10%)
Frame = +3
Query: 408 AVTVKADSKPKAKPAE----EVKPESDDDDDDSDEEDDSEEDGSDSEKGMDVDEDDSED- 572
A VKAD+KPKAKPAE E KPES D++D+SD+ED+SEED DSEKGMDVDEDDS+D
Sbjct: 129 AAVVKADTKPKAKPAEVKPAEEKPES-DEEDESDDEDESEED-DDSEKGMDVDEDDSDDD 186
Query: 573 -EDDSED-EDDETSKKPEVSNKKRPNESAASKASVSAKKAKPA-----TPHPAKKGGKSP 731
E+DSED E++ET KKPE NKKRPNES SK VS KKAKPA TP +K
Sbjct: 187 EEEDSEDEEEEETPKKPEPINKKRPNES-VSKTPVSGKKAKPAAAPASTPQKTEKKKGGH 245
Query: 732 VNANQSPKSGGQSPSGGGANKKQFNSGK*FGSNNKGKGKGKGR 860
K GG+SP AN+ + G+ G NN K G+
Sbjct: 246 TATPHPAKKGGKSPV--NANQSPKSGGQSSGGNNNKKPFNSGK 286
Score = 127 bits (319), Expect = 1e-029
Identities = 85/179 (47%), Positives = 107/179 (59%), Gaps = 18/179 (10%)
Frame = +3
Query: 366 SDSEEEEEAAAVPAAVTVKADSKPKAKPAEEVKPESDDDD------DDSDEEDDSEEDGS 527
+D++ + + A V A K +S + + +E + E DDD D+ D +DD EED
Sbjct: 134 ADTKPKAKPAEVKPA-EEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSE 192
Query: 528 DSEKGMDVDEDDSEDEDDSEDEDDETSKKPEVSNKK-RPNESAASKASVSAKK--AKPAT 698
D E+ +E + E ++ +E+ K VS KK +P + AS + KK AT
Sbjct: 193 DEEE----EETPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKGGHTAT 248
Query: 699 PHPAKKGGKSPVNANQSPKSGGQSPSGGGANKKQFNSGK*F-GSNNKG--KGKGKGRA* 866
PHPAKKGGKSPVNANQSPKSGGQS SGG NKK FNSGK F GSNNKG KGKGKGRA*
Sbjct: 249 PHPAKKGGKSPVNANQSPKSGGQS-SGGNNNKKPFNSGKQFGGSNNKGSNKGKGKGRA* 306
>TAIR9_protein||AT5G03740.1 | Symbols: HD2C, HDT3 | HD2C (HISTONE DEACETYLASE
2C); histone deacetylase/ nucleic acid binding / transcription
repressor/ zinc ion binding | chr5:981994-983961 FORWARD
Length = 295
Score = 164 bits (413), Expect = 1e-040
Identities = 107/271 (39%), Positives = 148/271 (54%), Gaps = 20/271 (7%)
Frame = +3
Query: 60 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKG--ETALLYVTVDGKKLVMGTLSQ 233
MEFWGVEV GK + + P + L+H+SQ +L + K E LYVTV KL++GTLS
Sbjct: 1 MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 234 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTPEDEEDFSDSEEEEEAAAVPAAV 413
PQ+S ++V E+ F LSH+ ++GSV F GYK + + ED D ++ EAA AA
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVDASDPEPEDLID--DQLEAAGFKAAP 118
Query: 414 TVKADSKPKAKPAEEVKPESDDD----DDDSDEEDDSEEDGSDSEKGM----DVDEDDSE 569
A P E+VK + DDD ++DS ++DDSE G + E+ + D +EDDS
Sbjct: 119 KSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAESDSEEDDSS 178
Query: 570 DEDDSEDEDDETSKKPEVSNKKRPNESAASKASVSAKKAKPATPHPAKKGGKSP---VNA 740
D+++ + ++ET KKPE KKR E +SK S KKAK TP K K P V
Sbjct: 179 DDEEDDSSEEETPKKPE-EPKKRSAEPNSSKNPASNKKAKFVTPQ--KTDSKKPHVHVAT 235
Query: 741 NQSPKSGGQSPSGG--GANKKQFNSGK*FGS 827
K G++ GG G KQ + K G+
Sbjct: 236 PHPSKQAGKNSGGGSTGETSKQQQTPKSAGA 266
>TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-related |
chr5:25510776-25511456 REVERSE
Length = 227
Score = 64 bits (153), Expect = 2e-010
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 426 DSKPKAKPAEEVKPESDDDDDDSDEEDDSEEDGSDSEKGMDVDEDDSEDEDDSEDEDDET 605
D A E+ + DDDDDD D++DD +D D E D DEDD EDEDD +D+DDE
Sbjct: 74 DEDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDED--DDDEDDDEDEDDDDDDDDEN 131
Query: 606 SKK 614
++
Sbjct: 132 DEE 134
>TAIR9_protein||AT1G48400.1 | Symbols: | F-box family protein |
chr1:17882136-17883855 REVERSE
Length = 514
Score = 57 bits (136), Expect = 2e-008
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 471 SDDDDDDSDEEDDSEEDGSDSEKGMDVDEDDSEDEDDSEDEDDE 602
SDDDDDD D++DD ++D D + D D+DD +D+DD +D+D +
Sbjct: 284 SDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGD 327
>TAIR9_protein||AT5G37430.1 | Symbols: | unknown protein |
chr5:14842430-14844308 FORWARD
Length = 608
Score = 55 bits (131), Expect = 6e-008
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 468 ESDDDDDDSDEEDDSEEDGSDSEKGMDVDEDDSEDEDDSEDEDD 599
+ D DDDD D +DD ++D D + G D D+DD +D DD +D+DD
Sbjct: 562 DDDGDDDDDDGDDDGDDDDDDGDDGDDDDDDDGDDGDDDDDDDD 605
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,996,749,998
Number of Sequences: 33410
Number of Extensions: 12996749998
Number of Successful Extensions: 413239888
Number of sequences better than 0.0: 0
|
