BLASTX 7.6.2
Query= UN25447 /QuerySize=747
(746 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo ... 159 2e-039
TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203... 56 2e-008
TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337... 53 2e-007
TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:1456... 50 2e-006
TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-rel... 49 4e-006
TAIR9_protein||AT1G63980.1 | Symbols: | D111/G-patch domain-con... 48 5e-006
TAIR9_protein||AT1G63980.2 | Symbols: | D111/G-patch domain-con... 48 5e-006
>TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo defective
1865); RNA binding | chr3:6313572-6317584 FORWARD
Length = 849
Score = 159 bits (401), Expect = 2e-039
Identities = 81/104 (77%), Positives = 91/104 (87%), Gaps = 2/104 (1%)
Frame = +3
Query: 180 ISKRPRNLLTKAKALKRSIAMQRHEAVSQHISELEKTIEQMQNELTAKKPSYNESEWEND 359
IS RPRNLLTKAKALKRSIAMQRHEA+SQHISELE+TIEQMQ++LT+K PSY+ESEWEND
Sbjct: 748 ISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQLTSKNPSYSESEWEND 807
Query: 360 DDDDDEDGEEERDDSEDDESDWDEEADSESTISSLEEADYPLR* 491
+DDDD D EEE+DD ED+ESDWD E D ES ISS+EEAD R*
Sbjct: 808 EDDDD-DEEEEKDDVEDNESDWD-ETDGESAISSIEEADMSSR* 849
Score = 112 bits (279), Expect = 3e-025
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +2
Query: 2 VGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVASARVVKRIQHKPTLPNRN 181
VGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVA+ARVVKRIQHK L
Sbjct: 567 VGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQSK 626
Query: 182 FKETKK 199
F+ +K
Sbjct: 627 FQRAEK 632
>TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203548-8207243
FORWARD
Length = 882
Score = 56 bits (133), Expect = 2e-008
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +3
Query: 189 RPRNLLTKAKALKRSIAMQRHEAVSQHISELEKTIEQMQNEL--TAKKPSYNESEWENDD 362
RP+NLLTK KAL RSI +QR E + +HIS ++ +Q++ E+ K + E N
Sbjct: 736 RPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKL 795
Query: 363 DDDDEDGEEERDDSEDDESDWDEEADSE 446
D +EE D+ +DD++ + A+ E
Sbjct: 796 DMAYASSDEETDEEDDDDAFPETYAEGE 823
>TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337390-8341057
REVERSE
Length = 933
Score = 53 bits (125), Expect = 2e-007
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 189 RPRNLLTKAKALKRSIAMQRHEAVSQHISELEKTIEQMQNEL---TAKKPSYNESEWEND 359
RP+NLLTK KAL RS+ +Q+ EA+ +HI ++ EQ++ E+ K +E+ ++
Sbjct: 788 RPKNLLTKRKALARSLELQKREALIKHIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKL 847
Query: 360 DDDDDEDGEEERDDSEDDESDWDEEAD 440
D D E E D E+D+ D D
Sbjct: 848 DMAYSSDEETEETDGEEDDVYLDTYED 874
>TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:14569728-14572804
FORWARD
Length = 777
Score = 50 bits (117), Expect = 2e-006
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Frame = +3
Query: 189 RPRNLLTKAKALKRSIAMQRHEAVSQHISELEKTIEQMQNELTAKKPSYNESEWENDDDD 368
RP NLLT+ KA RSI +QR EA+ H+++LE+ IE + K ++ E N D+
Sbjct: 703 RPSNLLTRKKAFARSIELQRREALKYHVADLEERIELL------KTGQDDDMETRNKSDE 756
Query: 369 DDED---GEEERDDSEDD 413
++E+ +E D S D+
Sbjct: 757 EEENLYLRVDESDFSSDE 774
>TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-related |
chr5:25510776-25511456 REVERSE
Length = 227
Score = 49 bits (114), Expect = 4e-006
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +3
Query: 336 NESEWENDDDDDDEDGEEERDDSEDDESDWDEEADSE 446
+E E E+DDDDDD+D +++ DD++DDE D DE+ D +
Sbjct: 84 DEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDED 120
>TAIR9_protein||AT1G63980.1 | Symbols: | D111/G-patch domain-containing protein
| chr1:23740646-23743054 FORWARD
Length = 392
Score = 48 bits (113), Expect = 5e-006
Identities = 20/65 (30%), Positives = 42/65 (64%)
Frame = +3
Query: 321 KKPSYNESEWENDDDDDDEDGEEERDDSEDDESDWDEEADSESTISSLEEADYPLR*RMR 500
KK S++ S+ ++DDDDDD++ +EE D+ E + D D+++ ES++ + + D + +++
Sbjct: 259 KKTSFDNSDDDDDDDDDDDEEDEEEDEDESEADDDDKDSVIESSLPAKRKHDEIIEPKIK 318
Query: 501 RASFC 515
+ C
Sbjct: 319 LKNLC 323
>TAIR9_protein||AT1G63980.2 | Symbols: | D111/G-patch domain-containing protein
| chr1:23740646-23743054 FORWARD
Length = 390
Score = 48 bits (113), Expect = 5e-006
Identities = 20/65 (30%), Positives = 42/65 (64%)
Frame = +3
Query: 321 KKPSYNESEWENDDDDDDEDGEEERDDSEDDESDWDEEADSESTISSLEEADYPLR*RMR 500
KK S++ S+ ++DDDDDD++ +EE D+ E + D D+++ ES++ + + D + +++
Sbjct: 257 KKTSFDNSDDDDDDDDDDDEEDEEEDEDESEADDDDKDSVIESSLPAKRKHDEIIEPKIK 316
Query: 501 RASFC 515
+ C
Sbjct: 317 LKNLC 321
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,090,879,398
Number of Sequences: 33410
Number of Extensions: 13090879398
Number of Successful Extensions: 418613581
Number of sequences better than 0.0: 0
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