BLASTX 7.6.2
Query= UN25488 /QuerySize=1306
(1305 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [A... 548 1e-153
gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid bindin... 540 2e-151
gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana] 537 2e-150
gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid bindin... 517 3e-144
gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid bindin... 387 3e-105
gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis... 385 1e-104
gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [A... 382 1e-103
gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein... 293 5e-077
gi|255561144|ref|XP_002521584.1| r3h domain containing protein, ... 284 2e-074
gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana] 263 4e-068
gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid bindin... 262 1e-067
gi|297824031|ref|XP_002879898.1| hypothetical protein ARALYDRAFT... 260 4e-067
gi|255636099|gb|ACU18394.1| unknown [Glycine max] 252 1e-064
gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding... 249 1e-063
gi|224086775|ref|XP_002307959.1| predicted protein [Populus tric... 235 2e-059
gi|224137642|ref|XP_002322608.1| predicted protein [Populus tric... 224 3e-056
gi|255552461|ref|XP_002517274.1| r3h domain containing protein, ... 215 1e-053
gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis ... 124 3e-026
gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis ... 124 5e-026
gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis ... 122 2e-025
>gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 333
Score = 548 bits (1410), Expect = 1e-153
Identities = 277/334 (82%), Positives = 295/334 (88%), Gaps = 12/334 (3%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
AAMTEKEA VDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF+PFPTSYLRLAA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFRPFPTSYLRLAA 61
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFK 517
HRVAQHYGLVTM+L+NG GA DGS+NRILVTKTAESRFP+VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSENRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 518 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLRA 697
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSE+SSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--R 179
Query: 698 PPPPPPPLEGVNRNETEVAVSNSSLDA----GSRTSRVAIIRDREKDRYDPDYDRSYDRY 865
PPP +NRNETEVAV+N +DA RTSRVAIIRDREKDRYDPDYDRSYDRY
Sbjct: 180 PPPLEVKNTCINRNETEVAVNNDPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSYDRY 239
Query: 866 VVDPAYRYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGH---PAMSPFVNSP 1036
VVDPAYRY+RVMP GQSFSP+P+HIPFHDG FPQMPRG QANLNYGH PA+SPF ++
Sbjct: 240 VVDPAYRYVRVMPSGQSFSPIPIHIPFHDGVFPQMPRGHQANLNYGHPLNPALSPFTHNA 299
Query: 1037 AAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 1129
A+YTPWPN P+MNY Q LN D FRHPSASNP
Sbjct: 300 ASYTPWPNSPAMNYAQPLNGSDTNLFRHPSASNP 333
>gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 333
Score = 540 bits (1391), Expect = 2e-151
Identities = 277/338 (81%), Positives = 294/338 (86%), Gaps = 20/338 (5%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
A+MTEKEA VDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFK 517
HRVAQHYGLVTM+L+NG GA DGSDNRILVTKTAESRFP+VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 518 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLRA 697
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSE+SSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--- 178
Query: 698 PPPPPPPLE----GVNRNETEVAVSNSSLDA----GSRTSRVAIIRDREKDRYDPDYDRS 853
PP LE +NRNETEVAV+NS +DA RTSRVAIIRDREKDRYDPDYDRS
Sbjct: 179 ---RPPSLEVRNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 854 YDRYVVDPAYRYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGH---PAMSPF 1024
YDRYVVDPAYRY+RVMP GQSFSPMP+HIPFHDG FP MPRG QANLNYGH PA+SPF
Sbjct: 236 YDRYVVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPF 295
Query: 1025 VNSPAAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 1129
++ A+YTPWPN P MNY Q LN D +R+PSASNP
Sbjct: 296 THNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 333
>gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana]
Length = 333
Score = 537 bits (1383), Expect = 2e-150
Identities = 273/334 (81%), Positives = 291/334 (87%), Gaps = 12/334 (3%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
A+MTEKEA VDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFK 517
HRVAQHYGLVTM+L+NG G DGSDNRILVTKTAESRFP+VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGTGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 518 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLRA 697
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSE+SSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--R 179
Query: 698 PPPPPPPLEGVNRNETEVAVSNSSLDA----GSRTSRVAIIRDREKDRYDPDYDRSYDRY 865
PP +NRNETEVAV+NS +DA RTSRVAIIRDREK+RYDPDYDRSYDRY
Sbjct: 180 PPSLEVKNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKERYDPDYDRSYDRY 239
Query: 866 VVDPAYRYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGH---PAMSPFVNSP 1036
VVDPAYRY+RVMP GQSFSPMP+HIPFHDG FP MPRG QANLNYGH PA+SPF ++
Sbjct: 240 VVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPFTHNV 299
Query: 1037 AAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 1129
A+YTPWPN P MNY Q LN D +R+PSASNP
Sbjct: 300 ASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 333
>gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 325
Score = 517 bits (1329), Expect = 3e-144
Identities = 270/338 (79%), Positives = 286/338 (84%), Gaps = 28/338 (8%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
A+MTEKEA VDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFK 517
HRVAQHYGLVTM+L+NG GA DGSDNRILVTKTAESRFP+VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 518 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLRA 697
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSE+SSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--- 178
Query: 698 PPPPPPPLE----GVNRNETEVAVSNSSLDA----GSRTSRVAIIRDREKDRYDPDYDRS 853
PP LE +NRNETEVAV+NS +DA RTSRVAIIRDREKDRYDPDYDRS
Sbjct: 179 ---RPPSLEVRNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRS 235
Query: 854 YDRYVVDPAYRYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGH---PAMSPF 1024
YDRYV RVMP GQSFSPMP+HIPFHDG FP MPRG QANLNYGH PA+SPF
Sbjct: 236 YDRYV--------RVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPF 287
Query: 1025 VNSPAAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 1129
++ A+YTPWPN P MNY Q LN D +R+PSASNP
Sbjct: 288 THNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 325
>gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 324
Score = 387 bits (993), Expect = 3e-105
Identities = 217/334 (64%), Positives = 254/334 (76%), Gaps = 26/334 (7%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
AAM++KEA VDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EFQP PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPE-NGRPEGF 514
HRVAQHYGL T +LE G +DGS NRIL TKT ESR+P+VCLSEIPVKQPE +GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 515 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLR 694
KIAIK RP RG+G GSGSGV++NLLRSVEERKEEYDKARARIFNSPSSSDSE+SS+ R
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST--R 177
Query: 695 APPPPPPPLEG------VNRNETEVAVSNSSLDAGSRTSRVAIIRDREK-DRYDPDYDRS 853
APPPP P L+ +RNETEV V+ +S R +IRD + R DR
Sbjct: 178 APPPPYPRLDSKHNTACPSRNETEVVVNYNSNPVD--VERNGVIRDSGRTSRVAIIRDRE 235
Query: 854 YDRYVVDPAY---RYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGHPAMSPF 1024
DRY DP Y RY+RV PP Q+F+P+P+ +PFHD FPQMPR QA+LNYGHP ++P
Sbjct: 236 KDRY--DPDYDRNRYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYGHP-LNPA 291
Query: 1025 VNSPAAYTPWPNLPSMNYVQSLNRPD---FRHPS 1117
+ +P +YT WP+ +M Y Q+LN D FRHP+
Sbjct: 292 MTAP-SYTEWPS-ATMTYAQTLNASDVHHFRHPN 323
>gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis thaliana]
Length = 343
Score = 385 bits (987), Expect = 1e-104
Identities = 214/329 (65%), Positives = 250/329 (75%), Gaps = 23/329 (6%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
AAM++KEA VDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EFQP PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPE-NGRPEGF 514
HRVAQHYGL T +LE G +DGS NRIL TKT ESR+P+VCLSEIPVKQPE +GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 515 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLR 694
KIAIK RP RG+G GSGSGV++NLLRSVEERKEEYDKARARIFNSPSSSDSE+SS+ R
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST--R 177
Query: 695 APPPPPPPLEG------VNRNETEVAVSNSSLDAGSRTSRVAIIRDREK-DRYDPDYDRS 853
APPPP P L+ +RNETEV V+ +S R +IRD + R DR
Sbjct: 178 APPPPYPRLDSKHNTACPSRNETEVVVNYNSNPVD--VERNGVIRDSGRTSRVAIIRDRE 235
Query: 854 YDRYVVDPAY---RYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGHPAMSPF 1024
DRY DP Y RY+RV PP Q+F+P+P+ +PFHD FPQMPR QA+LNYGHP ++P
Sbjct: 236 KDRY--DPDYDRNRYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYGHP-LNPA 291
Query: 1025 VNSPAAYTPWPNLPSMNYVQSLNRPDFRH 1111
+ +P +YT WP+ +M Y Q+LN D H
Sbjct: 292 MTAP-SYTEWPS-ATMTYAQTLNASDVHH 318
>gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 324
Score = 382 bits (979), Expect = 1e-103
Identities = 211/334 (63%), Positives = 254/334 (76%), Gaps = 26/334 (7%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
AAM++KEA VDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EFQP PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPE-NGRPEGF 514
HRVAQHYGL T +L+ G +DGS NRIL TKTAESR+P+VCLSEIPVKQPE +G+PEGF
Sbjct: 62 HRVAQHYGLFTTALD--GGGVDGSGNRILATKTAESRYPYVCLSEIPVKQPEIHGKPEGF 119
Query: 515 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLR 694
KIAIK RP RGSG GSGSGV++NLLRSVEERKEEYD+ARARIFNSPSSSDSE+SS+ R
Sbjct: 120 KIAIKPRPNRGSGGSGSGSGVEKNLLRSVEERKEEYDRARARIFNSPSSSDSEDSST--R 177
Query: 695 APPPPPPPLEG------VNRNETEVAVSNSSLDAGSRTSRVAIIRDREK-DRYDPDYDRS 853
APPPPPP L+ +RNE+EV ++++S R + RD + R DR
Sbjct: 178 APPPPPPRLDSKHNSTCPSRNESEVVINHNSNPVD--VERNGVFRDSGRTSRVAIIRDRE 235
Query: 854 YDRYVVDPAY---RYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGHPAMSPF 1024
DRY DP Y RY+RV PP Q+F+P+P+ + FHD FPQ PR QA++NYGHP ++P
Sbjct: 236 KDRY--DPDYDRNRYVRVAPPVQNFNPIPIPLQFHDAIFPQTPR-TQASINYGHP-LNPA 291
Query: 1025 VNSPAAYTPWPNLPSMNYVQSLNRPD---FRHPS 1117
+ +P +YT WP+ +M Y Q+LN D FRHP+
Sbjct: 292 MTAP-SYTEWPS-ATMTYAQTLNASDTHHFRHPN 323
>gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 356
Score = 293 bits (749), Expect = 5e-077
Identities = 179/348 (51%), Positives = 222/348 (63%), Gaps = 51/348 (14%)
Frame = +2
Query: 155 AAAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLA 334
+A +KE+ VDPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ QFEFQ FPTSYLRLA
Sbjct: 11 SATPGDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLA 70
Query: 335 AHRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGF 514
AHRVA HYGL TM +N ++DG NRI+V KTAESR P +CLSEIP KQ EN +PE
Sbjct: 71 AHRVALHYGLQTMVQDN---SVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKPEHI 127
Query: 515 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLR 694
KIAI+ RP + S + + +G++++ +R+VEERKEEYDKARARIF++P+S DS+++
Sbjct: 128 KIAIRRRPNKTSLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDTL---- 183
Query: 695 APPPPPPPLEGVN-----------RNETEVAVSNSSLDAGSRTSRVAIIRDREKDRYDPD 841
P P +G N RN N S+ +SRVAI RDREKDR DPD
Sbjct: 184 ----PQAPADGKNLCLNGDENEGCRNSMADPEKNISIRDSGTSSRVAIFRDREKDRTDPD 239
Query: 842 YDRSYDRYVVDPAYRYIRVMPPGQSFSPMP-----MHIPF--HDGGFPQMP--RGPQANL 994
YDRSY+RYV R +P QSFS P + PF +D GFPQ+ + QA+L
Sbjct: 240 YDRSYERYV--------RNLPTNQSFSLAPFDAQKIQHPFLQYDTGFPQLGQIQRTQASL 291
Query: 995 NY--GHPAMSPF-------VNSPAAYTPWPNLPSMNYVQSLNRPDFRH 1111
+Y +P M+PF + A Y WP+ SM Y S + FRH
Sbjct: 292 SYRPSNPIMNPFCAMGLNQTSRDAVYLQWPS-HSMMYAHSYEQ--FRH 336
>gi|255561144|ref|XP_002521584.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 349
Score = 284 bits (726), Expect = 2e-074
Identities = 176/340 (51%), Positives = 219/340 (64%), Gaps = 39/340 (11%)
Frame = +2
Query: 161 AMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAH 340
A+T+KE+ VDPFLVEALQNPRHRLTILRMELDIQ+F QNP Q QFEFQ FPTSYLRLAAH
Sbjct: 6 AITDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHFPTSYLRLAAH 65
Query: 341 RVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFKI 520
RVAQHYGL+TM +N + DG N+ILV KTAE R+P V L EIP KQ E+ + E KI
Sbjct: 66 RVAQHYGLITMVQDN---SFDGLVNKILVKKTAEIRYPAVRLCEIPAKQWESDKSEQVKI 122
Query: 521 AIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSE----ESSSL 688
I+ RP +GS + + GV+Q+ +RSVEERKEEYD+ARARIF+SPSS++ + + S
Sbjct: 123 VIRPRPNKGSTNEFNEFGVKQDPVRSVEERKEEYDRARARIFSSPSSTNLDDVVSQGSID 182
Query: 689 LRAPPPPPPPLEGVNRNETEVAVSNSSLDAGSRTSRVAIIRDREKDRYDPDYDRSYDRYV 868
++ P LE + + + + D SRVAI RDREKDR DPDYDRSYD
Sbjct: 183 RKSTNPSKDELENCRYSANDPEKNINPRDGA--PSRVAIFRDREKDRTDPDYDRSYD--- 237
Query: 869 VDPAYRYIRVMPPGQSFSPMPMH-----IPF--HDGGFPQMPRGP--QANLNY---GHPA 1012
RYIR +P QSF+ P++ +PF +D GFPQ+ + P Q +L+Y P
Sbjct: 238 -----RYIRSLPTNQSFNLAPLNMQKIQLPFIPYDTGFPQLGQMPRTQNSLSYQPAASPV 292
Query: 1013 MSPF-------VNSPAAYTPWPNLPSMNYVQSLNRPDFRH 1111
MSPF + AY WP+ SM Y S + FRH
Sbjct: 293 MSPFCAVGSNQTSRDPAYVQWPS-ASMMYAHSYEQ--FRH 329
>gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana]
Length = 351
Score = 263 bits (672), Expect = 4e-068
Identities = 161/323 (49%), Positives = 199/323 (61%), Gaps = 22/323 (6%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
A + +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+PDQ QFEFQ FPTSYLRLAA
Sbjct: 12 AVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRLAA 71
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFK 517
HRVA HYGL+T + G DG+++RI+VTK+++SRFP LSEIPVKQ E G+ E K
Sbjct: 72 HRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMK 128
Query: 518 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLL-- 691
+ IK RP +GSG G ++ LL+SVEERKE+YD+ARARIFN + D +SSS
Sbjct: 129 VVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNP 186
Query: 692 -RAPPPPPPPLEGVNRNETEVAVSNSSLDAGSRTSRVAIIRDREKDRYDPDYDRSYDRYV 868
R V +N A N+ + SR+AI+RDREKDRYDPDYDRS RY+
Sbjct: 187 WRVNCSSSRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYI 246
Query: 869 VD-PAYRYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYG-HPAMSPFV----N 1030
+ P + + V F+ M P +D GF +LN G H MSP V N
Sbjct: 247 SNLPVDQNLCV----AHFNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHSVMSPCVTTGLN 302
Query: 1031 SP----AAYTPWPNLPSMNYVQS 1087
P A Y WPN ++ Y S
Sbjct: 303 QPSRDAAMYMQWPNAAAVMYTHS 325
>gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 351
Score = 262 bits (668), Expect = 1e-067
Identities = 160/323 (49%), Positives = 198/323 (61%), Gaps = 22/323 (6%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
A + +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+PDQ QFEFQ FPTSYLR AA
Sbjct: 12 AVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAA 71
Query: 338 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFK 517
HRVA HYGL+T + G DG+++RI+VTK+++SRFP LSEIPVKQ E G+ E K
Sbjct: 72 HRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMK 128
Query: 518 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLL-- 691
+ IK RP +GSG G ++ LL+SVEERKE+YD+ARARIFN + D +SSS
Sbjct: 129 VVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNP 186
Query: 692 -RAPPPPPPPLEGVNRNETEVAVSNSSLDAGSRTSRVAIIRDREKDRYDPDYDRSYDRYV 868
R V +N A N+ + SR+AI+RDREKDRYDPDYDRS RY+
Sbjct: 187 WRVNCSSSRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYI 246
Query: 869 VD-PAYRYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYG-HPAMSPFV----N 1030
+ P + + V F+ M P +D GF +LN G H MSP V N
Sbjct: 247 SNLPVDQNLCV----AHFNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHSVMSPCVTTGLN 302
Query: 1031 SP----AAYTPWPNLPSMNYVQS 1087
P A Y WPN ++ Y S
Sbjct: 303 QPSRDAAMYMQWPNAAAVMYTHS 325
>gi|297824031|ref|XP_002879898.1| hypothetical protein ARALYDRAFT_483163
[Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 260 bits (664), Expect = 4e-067
Identities = 161/323 (49%), Positives = 193/323 (59%), Gaps = 26/323 (8%)
Frame = +2
Query: 164 MTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHR 343
M +K VDPFLVEALQNPRHR TILRMELDIQ+FFQ+PDQ FEFQ FPTSYLRLAAHR
Sbjct: 14 MADKGFTVDPFLVEALQNPRHRPTILRMELDIQRFFQSPDQQLFEFQQFPTSYLRLAAHR 73
Query: 344 VAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFKIA 523
VA HYGL+T + G DG+ +RI+VTK+ ESRFP V LSEIP KQ E G+ E K+A
Sbjct: 74 VANHYGLITSVRD---GGADGNGSRIVVTKSTESRFPAVRLSEIPAKQSEIGKFEHMKVA 130
Query: 524 IKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLRAPP 703
IK RP +GSG + L +SVEERKE+YD+ARARIFN + D +SSS
Sbjct: 131 IKPRPSKGSGMEAGELEKKGGLPKSVEERKEDYDRARARIFNGLADLDCNDSSSETNPWS 190
Query: 704 PPPPPLEGVN---RNETEVAVSNSSLDAGSRTSRVAIIRDREKDRYDPDYDRSYDRYV-- 868
P N +N A N + TSR+AI+RDREKDRYDPDYD SYDRY+
Sbjct: 191 VKCSPSRDENQVLKNGNIEADKNHIPRESNPTSRIAILRDREKDRYDPDYDHSYDRYIRN 250
Query: 869 --VDPAYRYIRVMPPGQSFSPMPMHIPFHDGGFPQMPRGPQ--ANLNYG-HPAMSPFVNS 1033
VD + F+ M P +D GF + P A+L G H MSP+V
Sbjct: 251 LPVDQNFCLAH-------FNSQEMGTPIYDLGFSGYSQNPSGAASLKLGQHSVMSPYV-- 301
Query: 1034 PAAYTPWPNLPSMNYVQSLNRPD 1102
T N PSM+ + P+
Sbjct: 302 ----TTGLNQPSMDAAMYMQWPN 320
>gi|255636099|gb|ACU18394.1| unknown [Glycine max]
Length = 355
Score = 252 bits (643), Expect = 1e-064
Identities = 151/295 (51%), Positives = 190/295 (64%), Gaps = 18/295 (6%)
Frame = +2
Query: 170 EKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHRVA 349
+KE+ VDPFLVEAL+NPRHR+TILRMELDIQ+F N D FEFQ FP+SYLRLAAHRVA
Sbjct: 16 DKESMVDPFLVEALENPRHRVTILRMELDIQRFLSNADYQHFEFQHFPSSYLRLAAHRVA 75
Query: 350 QHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFKIAIK 529
QHYG+ TM +NG LDG RI+V K AESR+P V LSEIP KQ EN +PE KIAI+
Sbjct: 76 QHYGMQTMVQDNG---LDGQGTRIMVRKMAESRYPMVRLSEIPAKQLENDKPEKIKIAIR 132
Query: 530 ARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLRAPPPP 709
RP + S + + +G + N RSVEERK EYD+ARARIF+S S DS++ +L +
Sbjct: 133 PRPNKISLNEANEAGRKSNPPRSVEERKVEYDRARARIFSSSRSCDSDD--TLSQTSTDE 190
Query: 710 PPPLEGVNRNETE----VAVSNSSLDAGSRTSRVAIIRDREKDRYDPDYDRSYDRYVVDP 877
L + NET V S+ ++RVAI+RDREKDR DPDYDR+Y+RY
Sbjct: 191 KNSLINKDENETSKTPVVYSEQCSIGRDINSTRVAILRDREKDRSDPDYDRNYERYARSI 250
Query: 878 AYRYIRVMPPGQSFSPMPMHIPF--HDGGFPQMPR--GPQANLNYGHPAMSPFVN 1030
+ +MP F+ + PF +D F Q+ + QA+L YG P SP +N
Sbjct: 251 PTSSVNLMP----FNLQQVRHPFVQYDNAFNQLSQMSQNQASLGYG-PQPSPMMN 300
>gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding R3H [Medicago
truncatula]
Length = 353
Score = 249 bits (634), Expect = 1e-063
Identities = 162/333 (48%), Positives = 208/333 (62%), Gaps = 23/333 (6%)
Frame = +2
Query: 173 KEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHRVAQ 352
KE+ VDPFLVEALQNPRHRLTILRMELDIQKF N DQ FEFQ FP+SYLRLAAHRVAQ
Sbjct: 17 KESMVDPFLVEALQNPRHRLTILRMELDIQKFMNNADQQHFEFQHFPSSYLRLAAHRVAQ 76
Query: 353 HYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFKIAIKA 532
HYG+ TM + G LDG ++ILV K ES++P V LSEIP KQ +N + E KI I++
Sbjct: 77 HYGMQTMVQDIG---LDG-QSKILVRKLPESKYPVVRLSEIPAKQLDNEKSELKKIVIQS 132
Query: 533 RPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEESSSLLRAPPPPP 712
RP + S +G + S + N LRSVEERKEEYD+ARARIFN +S DS ++SS++ P
Sbjct: 133 RPHKTSLNGANDSTKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTSSMV--PTDGK 190
Query: 713 PPLEGVNRNE-TEVAVSNSSLDAGSRTS---RVAIIRDREKDRYDPDYDRSYDRYVVDPA 880
+ +E +++ +++S R + RVAIIRDREKDR DPDYDRSY RY +
Sbjct: 191 NSFMSKDESEISKIPMADSERFFSVRDNSYPRVAIIRDREKDRSDPDYDRSYGRYARSLS 250
Query: 881 YRYIRVMP---PGQSFSPMPMHIPFHDGGFPQMPRGPQANLNYGHPA---MSPF----VN 1030
+ ++P P S P F+ G QMP+ QA+L YG P+ MSPF +N
Sbjct: 251 ASAVNLVPFNLPKAQPSFAPYETTFNQLG--QMPQA-QASLGYGPPSTPMMSPFCTPGLN 307
Query: 1031 SPAAYTPWPNLPSMNYVQSLNRPDFRHPSASNP 1129
+ + PS + + + FRH +P
Sbjct: 308 PASGDGAYLQWPSPTMMYAHSYDQFRHAVYQSP 340
>gi|224086775|ref|XP_002307959.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 235 bits (597), Expect = 2e-059
Identities = 118/176 (67%), Positives = 144/176 (81%), Gaps = 3/176 (1%)
Frame = +2
Query: 152 AAAAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRL 331
A AA+ EKE+ VDPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ FEFQ FPTSYLRL
Sbjct: 8 AVAAINEKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQLFEFQHFPTSYLRL 67
Query: 332 AAHRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEG 511
AAHRVA HYGL+TM +NG +DG N+ILV KTA+SR+P VCL+ IP KQ E+ +PE
Sbjct: 68 AAHRVAHHYGLITMVQDNG---IDGLGNKILVQKTAQSRYPAVCLTAIPAKQLESDKPEK 124
Query: 512 FKIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEES 679
K+AI+ RP +GS + +G GV++N +RSVEERKE+YD+ARARIF+SPSS +E++
Sbjct: 125 IKLAIRPRPNKGSINDPNGFGVKRNPVRSVEERKEDYDRARARIFSSPSSPTAEDT 180
>gi|224137642|ref|XP_002322608.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 224 bits (570), Expect = 3e-056
Identities = 115/176 (65%), Positives = 141/176 (80%), Gaps = 3/176 (1%)
Frame = +2
Query: 152 AAAAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRL 331
A AA+ EKE+ +DPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ FEF FPTSYLRL
Sbjct: 8 AVAAINEKESMMDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQVFEFPHFPTSYLRL 67
Query: 332 AAHRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEG 511
AAHRVAQHYGL+TM +NG +DG N+ILV KTAE R+P V LSEIP KQ + PE
Sbjct: 68 AAHRVAQHYGLITMVQDNG---IDGLLNKILVQKTAECRYPAVRLSEIPAKQSGSDTPEM 124
Query: 512 FKIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEES 679
K+AI+ RP +GS + +G G++++ +RSVEERKEEYD+ARARIF+SPSS ++++
Sbjct: 125 IKLAIRPRPNKGSINDPNGFGIKRSPVRSVEERKEEYDRARARIFSSPSSPTADDT 180
>gi|255552461|ref|XP_002517274.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 350
Score = 215 bits (547), Expect = 1e-053
Identities = 113/171 (66%), Positives = 132/171 (77%), Gaps = 3/171 (1%)
Frame = +2
Query: 164 MTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHR 343
+ EKE+ VDPFLVEAL NP HRLTILRME DIQ+F Q PDQ QFEFQ FPTSYLRLAAHR
Sbjct: 9 INEKESMVDPFLVEALHNPSHRLTILRMEHDIQRFLQIPDQQQFEFQHFPTSYLRLAAHR 68
Query: 344 VAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPHVCLSEIPVKQPENGRPEGFKIA 523
VAQHYGL+TM + G DG N+ILV KTAESR+P VCL EIP KQ E +PE KI
Sbjct: 69 VAQHYGLITMVQDYG---YDGLVNKILVKKTAESRYPAVCLCEIPAKQLERDKPEQVKIV 125
Query: 524 IKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEE 676
I+ RP +GS + + GV+Q+ +RSVEERKEEYD+ARARIF+SP S S++
Sbjct: 126 IRPRPNKGSINECNEFGVKQSPVRSVEERKEEYDRARARIFSSPCSPSSDD 176
>gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 124 bits (311), Expect = 3e-026
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
AAMTEKEA VDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILSMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 338 HRVAQHY 358
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 124 bits (309), Expect = 5e-026
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
AAMTEKEA VDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 338 HRVAQHY 358
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 122 bits (305), Expect = 2e-025
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +2
Query: 158 AAMTEKEAKVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 337
AAMTEKEA VDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R A
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFVA 61
Query: 338 HRVAQHY 358
HRVAQHY
Sbjct: 62 HRVAQHY 68
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,061,447,628,928
Number of Sequences: 15229318
Number of Extensions: 3061447628928
Number of Successful Extensions: 717782310
Number of sequences better than 0.0: 0
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