Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN25540


BLASTX 7.6.2

Query= UN25540 /QuerySize=605
        (604 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G79850.1 | Symbols: RPS17, CS17, PRPS17 | RPS1...    213   1e-055

>TAIR9_protein||AT1G79850.1 | Symbols: RPS17, CS17, PRPS17 | RPS17 (RIBOSOMAL
        PROTEIN S17); structural constituent of ribosome |
        chr1:30041473-30041922 REVERSE

          Length = 150

 Score =  213 bits (540), Expect = 1e-055
 Identities = 109/124 (87%), Positives = 114/124 (91%), Gaps = 1/124 (0%)
 Frame = -3

Query: 593 ASLASSLQSLKISSSPFTHGSTPLSSLSKPVSFPNTRKPGLVPAIRAMKTMQGRVVCATN 414
           +SL SSLQ+LK+ SSPF HGSTPLSSLSKP SFPN R P LVP IRAMKTMQGRVVCAT+
Sbjct:   4 SSLTSSLQALKL-SSPFAHGSTPLSSLSKPNSFPNHRMPALVPVIRAMKTMQGRVVCATS 62

Query: 413 DKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNVFKVGDVVRLEKSRPISKTKSFVALP 234
           DKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDN FKVGDVVRLEKSRPISKTKSFVALP
Sbjct:  63 DKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALP 122

Query: 233 VLKR 222
           V+ R
Sbjct: 123 VIAR 126

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,133,434,822
Number of Sequences: 33410
Number of Extensions: 13133434822
Number of Successful Extensions: 418659561
Number of sequences better than 0.0: 0