Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN25567


BLASTX 7.6.2

Query= UN25567 /QuerySize=555
        (554 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem...    178   2e-045
TAIR9_protein||AT1G51400.1 | Symbols:  | photosystem II 5 kD pro...    133   9e-032

>TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem II subunit T)
        | chr3:7376761-7377072 REVERSE

          Length = 104

 Score =  178 bits (451), Expect = 2e-045
 Identities = 92/107 (85%), Positives = 98/107 (91%), Gaps = 3/107 (2%)
 Frame = +3

Query:  69 MASMTMTATFLPAVAKLPSPTAGRRMSMVRASTSKNTPSLEVKAKEEQKSTTMRRDLMFT 248
           MASMTMTATF PAVAK+PS T GRR+S+VRASTS NTPSLEVK   EQ STTMRRDLMFT
Sbjct:   1 MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK---EQSSTTMRRDLMFT 57

Query: 249 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICRY* 389
           AAA+AVC+LAKVAMA+EEEPKRGTEAAKKKYAQVCVTMPTAKICRY*
Sbjct:  58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICRY* 104

>TAIR9_protein||AT1G51400.1 | Symbols:  | photosystem II 5 kD protein |
        chr1:19052172-19052492 REVERSE

          Length = 107

 Score =  133 bits (333), Expect = 9e-032
 Identities = 73/108 (67%), Positives = 90/108 (83%), Gaps = 6/108 (5%)
 Frame = +3

Query:  69 MASMTMTATFLPAVAKLP---SPTAGRRMSMVRASTSKNTPSLEVKAKEEQKSTTMRRDL 239
           MASMTMT++FLP V+ LP   S  + R +++V+AS S+NT SLE   K++++S  MRRDL
Sbjct:   1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLE--NKKQEQSMKMRRDL 58

Query: 240 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICR 383
           +FTAAA+AVC+LAKVAMAD +EPKRGTEAAKKKYA VCVTMPTAKICR
Sbjct:  59 VFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTAKICR 105

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,133,434,822
Number of Sequences: 33410
Number of Extensions: 13133434822
Number of Successful Extensions: 418659561
Number of sequences better than 0.0: 0