BLASTX 7.6.2
Query= UN25587 /QuerySize=794
(793 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O65155|KELP_ARATH RNA polymerase II transcriptional coactivat... 244 7e-064
sp|O65154|KIWI_ARATH RNA polymerase II transcriptional coactivat... 77 9e-014
sp|P53999|TCP4_HUMAN Activated RNA polymerase II transcriptional... 61 9e-009
sp|Q4R947|TCP4_MACFA Activated RNA polymerase II transcriptional... 61 9e-009
sp|Q5R6D0|TCP4_PONAB Activated RNA polymerase II transcriptional... 61 9e-009
sp|Q63396|TCP4_RAT Activated RNA polymerase II transcriptional c... 60 2e-008
sp|Q5ZK63|TCP4_CHICK Activated RNA polymerase II transcriptional... 60 2e-008
sp|P11031|TCP4_MOUSE Activated RNA polymerase II transcriptional... 60 2e-008
sp|P87294|TCP4_SCHPO Putative RNA polymerase II transcriptional ... 59 4e-008
sp|Q872F4|TCP4_NEUCR Putative RNA polymerase II transcriptional ... 51 9e-006
>sp|O65155|KELP_ARATH RNA polymerase II transcriptional coactivator KELP
OS=Arabidopsis thaliana GN=KELP PE=1 SV=1
Length = 165
Score = 244 bits (621), Expect = 7e-064
Identities = 123/165 (74%), Positives = 144/165 (87%), Gaps = 3/165 (1%)
Frame = +1
Query: 61 MDEESKVKIEKTVREILNESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFLD 240
M++E+K KIEKTV EIL+ESDM E+TEFKVR LASE+L IDLS+KSHKAFVR +V+ FLD
Sbjct: 1 MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60
Query: 241 EVESKQQQDKDEQEEEEE---QRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSI 411
E +++ ++ +EEE+ KG+KEFDDDGDLIICRLSDKRRV IQEF+GK+LVSI
Sbjct: 61 EERAREYENSQVNKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSI 120
Query: 412 REYYKKDGKELPSSKGISLTDEQWSTFKKNIPAIENAVKKMESRV 546
REYYKKDGKELP+SKGISLTDEQWSTFKKN+PAIENAVKKMESRV
Sbjct: 121 REYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165
>sp|O65154|KIWI_ARATH RNA polymerase II transcriptional coactivator KIWI
OS=Arabidopsis thaliana GN=KIWI PE=1 SV=1
Length = 107
Score = 77 bits (189), Expect = 9e-014
Identities = 34/94 (36%), Positives = 56/94 (59%)
Frame = +1
Query: 253 KQQQDKDEQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYYKKD 432
+ D+ E ++ AK + D D+++C +S RRV+++ + GK + IRE+Y KD
Sbjct: 13 RASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKIWIDIREFYVKD 72
Query: 433 GKELPSSKGISLTDEQWSTFKKNIPAIENAVKKM 534
GK LP KGISL+ +QW+T + + IE A+ +
Sbjct: 73 GKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDL 106
>sp|P53999|TCP4_HUMAN Activated RNA polymerase II transcriptional coactivator
p15 OS=Homo sapiens GN=SUB1 PE=1 SV=3
Length = 127
Score = 61 bits (146), Expect = 9e-009
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 268 KDEQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYY-KKDGKEL 444
K ++ E + K+ D + ++ R V++++F+GK L+ IREY+ +G+
Sbjct: 38 KKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMK 97
Query: 445 PSSKGISLTDEQWSTFKKNIPAIENAVKKM 534
P KGISL EQWS K+ I I++AV+K+
Sbjct: 98 PGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>sp|Q4R947|TCP4_MACFA Activated RNA polymerase II transcriptional coactivator
p15 OS=Macaca fascicularis GN=SUB1 PE=2 SV=1
Length = 127
Score = 61 bits (146), Expect = 9e-009
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 268 KDEQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYY-KKDGKEL 444
K ++ E + K+ D + ++ R V++++F+GK L+ IREY+ +G+
Sbjct: 38 KKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMK 97
Query: 445 PSSKGISLTDEQWSTFKKNIPAIENAVKKM 534
P KGISL EQWS K+ I I++AV+K+
Sbjct: 98 PGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>sp|Q5R6D0|TCP4_PONAB Activated RNA polymerase II transcriptional coactivator
p15 OS=Pongo abelii GN=SUB1 PE=2 SV=1
Length = 127
Score = 61 bits (146), Expect = 9e-009
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 268 KDEQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYY-KKDGKEL 444
K ++ E + K+ D + ++ R V++++F+GK L+ IREY+ +G+
Sbjct: 38 KKQKTGETSRALSSSKQSSSSRDDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMK 97
Query: 445 PSSKGISLTDEQWSTFKKNIPAIENAVKKM 534
P KGISL EQWS K+ I I++AV+K+
Sbjct: 98 PGRKGISLNPEQWSQLKEQISDIDDAVRKL 127
>sp|Q63396|TCP4_RAT Activated RNA polymerase II transcriptional coactivator p15
OS=Rattus norvegicus GN=Sub1 PE=2 SV=3
Length = 127
Score = 60 bits (144), Expect = 2e-008
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 268 KDEQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYY-KKDGKEL 444
K ++ E + K+ D + ++ R V++++F+GK L+ IREY+ +G+
Sbjct: 38 KKQKPGESSRALASSKQSSSSRDDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMK 97
Query: 445 PSSKGISLTDEQWSTFKKNIPAIENAVKKM 534
P KGISL EQWS K+ I I++AV+K+
Sbjct: 98 PGRKGISLNMEQWSQLKEQISDIDDAVRKL 127
>sp|Q5ZK63|TCP4_CHICK Activated RNA polymerase II transcriptional coactivator
p15 OS=Gallus gallus GN=SUB1 PE=2 SV=1
Length = 126
Score = 60 bits (143), Expect = 2e-008
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +1
Query: 274 EQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYY-KKDGKELPS 450
+Q+ E + + + D + ++ R V++++F+GK L+ IREY+ ++G+ P
Sbjct: 39 KQKTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPG 98
Query: 451 SKGISLTDEQWSTFKKNIPAIENAVKKM 534
KGISL EQW+ K+ I I++AV+K+
Sbjct: 99 RKGISLNPEQWNQLKEQISDIDDAVRKL 126
>sp|P11031|TCP4_MOUSE Activated RNA polymerase II transcriptional coactivator
p15 OS=Mus musculus GN=Sub1 PE=1 SV=3
Length = 127
Score = 60 bits (143), Expect = 2e-008
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 268 KDEQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYY-KKDGKEL 444
K ++ E + K+ D + ++ R V++++F+GK L+ IREY+ +G+
Sbjct: 38 KKQKPGETSRALASSKQSSSSRDDNMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMK 97
Query: 445 PSSKGISLTDEQWSTFKKNIPAIENAVKKM 534
P KGISL EQWS K+ I I++AV+K+
Sbjct: 98 PGRKGISLNMEQWSQLKEQISDIDDAVRKL 127
>sp|P87294|TCP4_SCHPO Putative RNA polymerase II transcriptional coactivator
OS=Schizosaccharomyces pombe GN=SPAC16A10.02 PE=1 SV=1
Length = 136
Score = 59 bits (140), Expect = 4e-008
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +1
Query: 355 SDKRRVAIQEFRGKALVSIREYYKKDGKELPSSKGISLTDEQWSTFKKNIPAIENAVKKM 534
++K+R+ + EFRG V IREYY+KDG LP KGI+L +W K+ I +++++ +
Sbjct: 35 TEKKRITLSEFRGTRYVHIREYYEKDGDMLPGKKGIALNINEWKKLKQLIHEVDDSLGLV 94
Query: 535 ES 540
+S
Sbjct: 95 DS 96
>sp|Q872F4|TCP4_NEUCR Putative RNA polymerase II transcriptional coactivator
OS=Neurospora crassa GN=80A10.210 PE=3 SV=1
Length = 172
Score = 51 bits (120), Expect = 9e-006
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 QQQDKDEQEEEEEQRAKGDKEFDDDGDLIICRLSDKRRVAIQEFRGKALVSIREYYKKDG 435
Q K + + Q + K D DG+ L + RR++ FR LV+IREYY G
Sbjct: 17 QYTKKSKGNTGKAQPQELTKGSDQDGN-TFWELGNNRRISSSVFRNTTLVNIREYYDAGG 75
Query: 436 KELPSSKGISLTDEQWSTFKKNIPAI 513
K +P KGISL+ Q+ K IP +
Sbjct: 76 KLMPGKKGISLSLAQYQNLLKVIPQL 101
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,282,147,502
Number of Sequences: 518415
Number of Extensions: 106282147502
Number of Successful Extensions: 672117376
Number of sequences better than 0.0: 0
|
