BLASTX 7.6.2

Query= UN25595 /QuerySize=1040
        (1039 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G21350.1 | Symbols:  | RNA polymerase transcri...    446   2e-125
TAIR9_protein||AT3G21350.2 | Symbols:  | RNA polymerase transcri...    298   4e-081

>TAIR9_protein||AT3G21350.1 | Symbols:  | RNA polymerase transcriptional
        regulation mediator-related | chr3:7517106-7518587 FORWARD

          Length = 258

 Score =  446 bits (1145), Expect = 2e-125
 Identities = 218/260 (83%), Positives = 239/260 (91%), Gaps = 2/260 (0%)
 Frame = +1

Query:  40 MDASLLSSAPADTFNGGNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFA 219
           MD+SLLS+A ADTFN GNA +QI PPLQPPGTDMTGI FRDQLWINSYPLDRNY+FDYFA
Sbjct:   1 MDSSLLSAATADTFN-GNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFA 59

Query: 220 LSPFYDITCNNEILRRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVT 399
           LSPFYD TCNNEILRRRS+HPLD S LSKMTGLEY+++DATEPNLFVFRKQKRDGPEKVT
Sbjct:  60 LSPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVT 119

Query: 400 PMLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASE 579
           PMLTYYILDG+IYQAPQLCSVFAARV R +Y+IS AF+ AASKLETI+QVD ++QNE +E
Sbjct: 120 PMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQVDTENQNEPAE 179

Query: 580 TKPASETVDLKEVKRVDLILKSLYSKLPPAPPPPPFPEGYVSQEALGENEEELGTQGGES 759
           +KPASETVDLKE+KRVD+IL SLY KL P PPPPPFPEGYVSQEALGE +EELGTQGGES
Sbjct: 180 SKPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGE-KEELGTQGGES 238

Query: 760 QQPQIDPIIDQGPAKRMKF* 819
           Q PQ+DPIIDQGPAKRMKF*
Sbjct: 239 QPPQVDPIIDQGPAKRMKF* 258

>TAIR9_protein||AT3G21350.2 | Symbols:  | RNA polymerase transcriptional
        regulation mediator-related | chr3:7517106-7518587 FORWARD

          Length = 299

 Score =  298 bits (762), Expect = 4e-081
 Identities = 144/169 (85%), Positives = 157/169 (92%), Gaps = 1/169 (0%)
 Frame = +1

Query:  40 MDASLLSSAPADTFNGGNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFA 219
           MD+SLLS+A ADTFN GNA +QI PPLQPPGTDMTGI FRDQLWINSYPLDRNY+FDYFA
Sbjct:   1 MDSSLLSAATADTFN-GNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFA 59

Query: 220 LSPFYDITCNNEILRRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVT 399
           LSPFYD TCNNEILRRRS+HPLD S LSKMTGLEY+++DATEPNLFVFRKQKRDGPEKVT
Sbjct:  60 LSPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVT 119

Query: 400 PMLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNAFSVAASKLETIKQ 546
           PMLTYYILDG+IYQAPQLCSVFAARV R +Y+IS AF+ AASKLETI+Q
Sbjct: 120 PMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQ 168


 Score =  151 bits (379), Expect = 1e-036
 Identities = 73/90 (81%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
 Frame = +1

Query: 550 DAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPPAPPPPPFPEGYVSQEALGENE 729
           D ++QNE +E+KPASETVDLKE+KRVD+IL SLY KL P PPPPPFPEGYVSQEALGE +
Sbjct: 211 DTENQNEPAESKPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGE-K 269

Query: 730 EELGTQGGESQQPQIDPIIDQGPAKRMKF* 819
           EELGTQGGESQ PQ+DPIIDQGPAKRMKF*
Sbjct: 270 EELGTQGGESQPPQVDPIIDQGPAKRMKF* 299

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,133,434,822
Number of Sequences: 33410
Number of Extensions: 13133434822
Number of Successful Extensions: 418659561
Number of sequences better than 0.0: 0