BLASTX 7.6.2
Query= UN25595 /QuerySize=1040
(1039 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9LIG1|Q9LIG1_ARATH Putative uncharacterized protein At3g2135... 441 7e-122
tr|B9N9I3|B9N9I3_POPTR Predicted protein (Fragment) OS=Populus t... 351 1e-094
tr|B9RQ93|B9RQ93_RICCO RNA polymerase II mediator complex subuni... 340 2e-091
tr|A5AE97|A5AE97_VITVI Putative uncharacterized protein OS=Vitis... 337 2e-090
tr|B8B401|B8B401_ORYSI Putative uncharacterized protein OS=Oryza... 321 1e-085
tr|Q69TG3|Q69TG3_ORYSJ Os06g0217500 protein OS=Oryza sativa subs... 321 1e-085
tr|C5Z6K4|C5Z6K4_SORBI Putative uncharacterized protein Sb10g007... 312 7e-083
tr|B4FN85|B4FN85_MAIZE Putative uncharacterized protein OS=Zea m... 311 9e-083
tr|A9RVG1|A9RVG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 229 4e-058
tr|B9FS73|B9FS73_ORYSJ Putative uncharacterized protein OS=Oryza... 207 2e-051
tr|D5AAZ6|D5AAZ6_PICSI Putative uncharacterized protein OS=Picea... 193 3e-047
tr|C3XZM7|C3XZM7_BRAFL Putative uncharacterized protein (Fragmen... 113 5e-023
tr|B3DLE4|B3DLE4_XENTR Mediator of RNA polymerase II transcripti... 107 2e-021
tr|B5FYR7|B5FYR7_TAEGU Putative mediator of RNA polymerase II tr... 106 6e-021
tr|B4E2P0|B4E2P0_HUMAN cDNA FLJ59149, highly similar to RNA poly... 104 2e-020
tr|B0BNE1|B0BNE1_RAT Mediator complex subunit 6 OS=Rattus norveg... 104 2e-020
tr|C1C411|C1C411_RANCA Mediator of RNA polymerase II transcripti... 104 3e-020
tr|B3S0T2|B3S0T2_TRIAD Putative uncharacterized protein (Fragmen... 103 4e-020
tr|D2HVR5|D2HVR5_AILME Putative uncharacterized protein (Fragmen... 103 5e-020
tr|A8K3N2|A8K3N2_HUMAN cDNA FLJ76264, highly similar to Homo sap... 102 6e-020
>tr|Q9LIG1|Q9LIG1_ARATH Putative uncharacterized protein At3g21350
OS=Arabidopsis thaliana GN=At3g21350 PE=1 SV=1
Length = 257
Score = 441 bits (1133), Expect = 7e-122
Identities = 216/257 (84%), Positives = 237/257 (92%), Gaps = 2/257 (0%)
Frame = +1
Query: 43 DASLLSSAPADTFNGGNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFAL 222
D+SLLS+A ADTFN GNA +QI PPLQPPGTDMTGI FRDQLWINSYPLDRNY+FDYFAL
Sbjct: 2 DSSLLSAATADTFN-GNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFAL 60
Query: 223 SPFYDITCNNEILRRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTP 402
SPFYD TCNNEILRRRS+HPLD S LSKMTGLEY+++DATEPNLFVFRKQKRDGPEKVTP
Sbjct: 61 SPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVTP 120
Query: 403 MLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASET 582
MLTYYILDG+IYQAPQLCSVFAARV R +Y+IS AF+ AASKLETI+QVD ++QNE +E+
Sbjct: 121 MLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQVDTENQNEPAES 180
Query: 583 KPASETVDLKEVKRVDLILKSLYSKLPPAPPPPPFPEGYVSQEALGENEEELGTQGGESQ 762
KPASETVDLKE+KRVD+IL SLY KL P PPPPPFPEGYVSQEALGE +EELGTQGGESQ
Sbjct: 181 KPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGE-KEELGTQGGESQ 239
Query: 763 QPQIDPIIDQGPAKRMK 813
PQ+DPIIDQGPAKRMK
Sbjct: 240 PPQVDPIIDQGPAKRMK 256
>tr|B9N9I3|B9N9I3_POPTR Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_276485 PE=4 SV=1
Length = 235
Score = 351 bits (899), Expect = 1e-094
Identities = 169/235 (71%), Positives = 190/235 (80%)
Frame = +1
Query: 112 PPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEILRRRSVHPLDH 291
PP QPPGTDMTGICFRDQLW+N+YPLDRN VFDYFALSPFYD TCNNE LR +S+HPLD
Sbjct: 1 PPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDL 60
Query: 292 SQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAA 471
S L KMTG EY++S+ EP+LFVFRKQKRD EKVTPMLTYY+LDG+IYQAPQLCSVFAA
Sbjct: 61 SHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAA 120
Query: 472 RVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLY 651
RVGRA+Y+IS AF AASKLE I VD++++ ASE+K E +D KEVKR+D IL SL
Sbjct: 121 RVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQ 180
Query: 652 SKLPPAPPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKRMKF 816
KLPPAPPPP FPEGYV Q E + QGGE Q P +DPIIDQGPAKRMKF
Sbjct: 181 RKLPPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 235
>tr|B9RQ93|B9RQ93_RICCO RNA polymerase II mediator complex subunit, putative
OS=Ricinus communis GN=RCOM_1486710 PE=4 SV=1
Length = 251
Score = 340 bits (870), Expect = 2e-091
Identities = 165/240 (68%), Positives = 191/240 (79%), Gaps = 2/240 (0%)
Frame = +1
Query: 97 GEQIAP-PLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEILRRRS 273
G +AP P QPPGTDMTGICFRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR +S
Sbjct: 12 GNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQS 71
Query: 274 VHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQL 453
+HPLD S LSKMTG EY++++ EPNLFV RKQKRD PEKVTPMLTYY+LDG+IYQAPQL
Sbjct: 72 IHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQL 131
Query: 454 CSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDL 633
C+VFAAR+GRA+YHIS AF+ AASKLE I VD + + ASE+K E +D KEVKR+D
Sbjct: 132 CNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKRIDH 190
Query: 634 ILKSLYSKLPPAPPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKRMK 813
IL S+ KLPPAPPPPPFPEGYV + + Q E+Q P +DPIIDQGPAKRMK
Sbjct: 191 ILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAKRMK 250
>tr|A5AE97|A5AE97_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_044247 PE=4 SV=1
Length = 253
Score = 337 bits (863), Expect = 2e-090
Identities = 171/246 (69%), Positives = 190/246 (77%), Gaps = 4/246 (1%)
Frame = +1
Query: 88 GNAGEQIAPPL--QPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEIL 261
GN PP PPGTDMTGICFRDQLW+NSYPLDRN VFDYFALSPFYD TCNNE L
Sbjct: 9 GNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQL 68
Query: 262 RRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQ 441
R RS+HPLD S LSKMTG EY++++ EP+LFV RKQKRDGPEKVTPMLTYYILDG+IYQ
Sbjct: 69 RLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQ 128
Query: 442 APQLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVK 621
APQLC+VF AR+GRA+YHIS AF+ AASKLE I VDA+++N A E+K ET+D KEV
Sbjct: 129 APQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVM 188
Query: 622 RVDLILKSLYSKLPPAPPPPPFPEGYV-SQEALGENEEELGTQGGESQQPQIDPIIDQGP 798
RVD IL SL KLPPAPP P FPEGY A GE E Q E Q P +DPIIDQGP
Sbjct: 189 RVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPET-QQAAEPQLPALDPIIDQGP 247
Query: 799 AKRMKF 816
+KRMKF
Sbjct: 248 SKRMKF 253
>tr|B8B401|B8B401_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_22170 PE=4 SV=1
Length = 258
Score = 321 bits (821), Expect = 1e-085
Identities = 157/240 (65%), Positives = 184/240 (76%), Gaps = 5/240 (2%)
Frame = +1
Query: 88 GNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEILRR 267
G G PP PPGTDMTGICFRDQLW+N+YPLDRN VFDYFALSPFYD+TCNNE LR
Sbjct: 20 GPDGAAALPP--PPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDLTCNNESLRS 77
Query: 268 RSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAP 447
R +HPLD S L+KMTG+EYV+SD EP+LFV RKQ+R+ PEK ML YYILDG+IYQAP
Sbjct: 78 RQIHPLDMSHLTKMTGMEYVLSDVMEPHLFVIRKQRRESPEKSNAMLAYYILDGSIYQAP 137
Query: 448 QLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRV 627
QLCSVFA+R+ RA++HIS AF+ A SKLE I V+ + ASE+K E +DLKE+KRV
Sbjct: 138 QLCSVFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRV 197
Query: 628 DLILKSLYSKLPPAPPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKR 807
D IL SL KL PAPPPPPFPEGYV E +++ L + E+ PQ+DPIIDQGPAKR
Sbjct: 198 DHILMSLQRKLQPAPPPPPFPEGYVPSEQEKASDDLLAS---EALPPQVDPIIDQGPAKR 254
>tr|Q69TG3|Q69TG3_ORYSJ Os06g0217500 protein OS=Oryza sativa subsp. japonica
GN=OSJNBb0024N18.27 PE=4 SV=1
Length = 242
Score = 321 bits (821), Expect = 1e-085
Identities = 156/240 (65%), Positives = 185/240 (77%), Gaps = 5/240 (2%)
Frame = +1
Query: 94 AGEQIAPPL--QPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEILRR 267
+G + PP PPGTDMTGICFRDQLW+N+YPLDRN VFDYFALSPFYD+TCNNE LR
Sbjct: 2 SGTPLPPPALPPPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDLTCNNESLRS 61
Query: 268 RSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAP 447
R +HPLD S L+KMTG+EYV+SD EP+LFV RKQ+R+ PEK ML YYILDG+IYQAP
Sbjct: 62 RQIHPLDMSHLTKMTGMEYVLSDVMEPHLFVIRKQRRESPEKSNAMLAYYILDGSIYQAP 121
Query: 448 QLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRV 627
QLCSVFA+R+ RA++HIS AF+ A SKLE I V+ + ASE+K E +DLKE+KRV
Sbjct: 122 QLCSVFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRV 181
Query: 628 DLILKSLYSKLPPAPPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKR 807
D IL SL KL PAPPPPPFPEGYV E +++ L + E+ PQ+DPIIDQGPAKR
Sbjct: 182 DHILMSLQRKLQPAPPPPPFPEGYVPSEQEKASDDLLAS---EALPPQVDPIIDQGPAKR 238
>tr|C5Z6K4|C5Z6K4_SORBI Putative uncharacterized protein Sb10g007370 OS=Sorghum
bicolor GN=Sb10g007370 PE=4 SV=1
Length = 249
Score = 312 bits (797), Expect = 7e-083
Identities = 151/240 (62%), Positives = 181/240 (75%), Gaps = 4/240 (1%)
Frame = +1
Query: 88 GNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEILRR 267
G G PP PPGTDMTGICFRDQLW+++YPLDRN VFDYFALSPFYDITCNNE LR
Sbjct: 10 GPDGAGALPP--PPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRS 67
Query: 268 RSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAP 447
R +HPLD S L+KMTG+EY++S+ EP+LFV RKQKR+ PEK PML YYILDG+IYQAP
Sbjct: 68 RQIHPLDMSHLTKMTGMEYLLSEVMEPHLFVIRKQKRESPEKSNPMLAYYILDGSIYQAP 127
Query: 448 QLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRV 627
QLC+VFA+R+ R ++HIS AF++A SKLE I V+ +S ASE+K E +DLKE+KR+
Sbjct: 128 QLCNVFASRISRTMHHISKAFTIACSKLEKIGNVETESDAVASESKTQKEAIDLKELKRI 187
Query: 628 DLILKSLYSKLPPAPPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKR 807
D IL SL K+ APPPPP+PEGYV A E E+ PQ+DPIIDQGP+KR
Sbjct: 188 DHILSSLKRKIGAAPPPPPYPEGYVPPSA--EQEKAPDDVAASEAPPQLDPIIDQGPSKR 245
>tr|B4FN85|B4FN85_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 249
Score = 311 bits (796), Expect = 9e-083
Identities = 148/230 (64%), Positives = 179/230 (77%), Gaps = 2/230 (0%)
Frame = +1
Query: 118 LQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEILRRRSVHPLDHSQ 297
L PPGTDMTGICFRDQLW+++YPLDRN VFDYFALSPFYDITCNNE LR R +HPLD S
Sbjct: 18 LPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSH 77
Query: 298 LSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARV 477
L+KMTG+EY++S+ EP+LFV RKQKR+ PEK +PML YYILDG+IYQAPQLC+VFA+R+
Sbjct: 78 LTKMTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRI 137
Query: 478 GRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSK 657
RA++HIS AF++A SKLE I V+ + ASE+K E +DLKE+KR+D IL SL K
Sbjct: 138 SRAMHHISKAFTIACSKLEKIGNVETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRK 197
Query: 658 LPPAPPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKR 807
+ APPPPP+PEGYV A E E+ PQ+DPIIDQGP+KR
Sbjct: 198 IGAAPPPPPYPEGYVPPSA--EQEKAPDDVAASEAPPQLDPIIDQGPSKR 245
>tr|A9RVG1|A9RVG1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_47270 PE=4 SV=1
Length = 184
Score = 229 bits (583), Expect = 4e-058
Identities = 110/184 (59%), Positives = 140/184 (76%), Gaps = 1/184 (0%)
Frame = +1
Query: 127 PGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEILRRRSVHPLDHSQLSK 306
PGT+MT I FRDQLW+++YPLDRN VFDYFALSPFYD TCNNE LR ++HPLD + LSK
Sbjct: 1 PGTEMTSISFRDQLWLSAYPLDRNLVFDYFALSPFYDRTCNNEQLRMEAIHPLDMTHLSK 60
Query: 307 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 486
TG+EY++ +A EP+LFV RKQKRDGPEKV+ YY+LDG+IYQAP L +V +RV R+
Sbjct: 61 KTGMEYILHEAQEPHLFVIRKQKRDGPEKVSAQAAYYVLDGSIYQAPHLYNVIGSRVVRS 120
Query: 487 VYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPP 666
+YHI+NAF+ A++KLE I +A + + ++ VD+KEV RVD IL + KLPP
Sbjct: 121 LYHITNAFAQASAKLEKIGTGEA-DPADVQVKQSTTKFVDMKEVMRVDSILAGIMRKLPP 179
Query: 667 APPP 678
APPP
Sbjct: 180 APPP 183
>tr|B9FS73|B9FS73_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_20601 PE=4 SV=1
Length = 168
Score = 207 bits (525), Expect = 2e-051
Identities = 103/167 (61%), Positives = 125/167 (74%), Gaps = 3/167 (1%)
Frame = +1
Query: 307 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 486
MTG+EYV+SD EP+LFV RKQ+R+ PEK ML YYILDG+IYQAPQLCSVFA+R+ RA
Sbjct: 1 MTGMEYVLSDVMEPHLFVIRKQRRESPEKSNAMLAYYILDGSIYQAPQLCSVFASRISRA 60
Query: 487 VYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPP 666
++HIS AF+ A SKLE I V+ + ASE+K E +DLKE+KRVD IL SL KL P
Sbjct: 61 MHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRVDHILMSLQRKLQP 120
Query: 667 APPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKR 807
APPPPPFPEGYV E +++ L + E+ PQ+DPIIDQGPAKR
Sbjct: 121 APPPPPFPEGYVPSEQEKASDDLLAS---EALPPQVDPIIDQGPAKR 164
>tr|D5AAZ6|D5AAZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 166
Score = 193 bits (490), Expect = 3e-047
Identities = 98/167 (58%), Positives = 124/167 (74%), Gaps = 6/167 (3%)
Frame = +1
Query: 307 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 486
MTG+EY++++ EP+LFV RKQKRDGP+KVTPMLTYY+LDG+IYQAPQL SVFA+R+ RA
Sbjct: 1 MTGIEYMLNEVMEPHLFVIRKQKRDGPDKVTPMLTYYVLDGSIYQAPQLSSVFASRMVRA 60
Query: 487 VYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPP 666
+Y+IS +F+VAASKLE I D + + ETK +E +D KEV RVD IL +L KL P
Sbjct: 61 LYYISKSFTVAASKLEKI-GYDTEGDSVKPETKAGAENIDFKEVMRVDHILTTLQRKLSP 119
Query: 667 APPPPPFPEGYVSQEALGENEEELGTQGGESQQPQIDPIIDQGPAKR 807
APPPPPFPEG+ + + + TQ G++Q DPIIDQG AKR
Sbjct: 120 APPPPPFPEGFAA-----PSSDTAETQDGQAQNGHTDPIIDQGAAKR 161
>tr|C3XZM7|C3XZM7_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_202253 PE=4 SV=1
Length = 246
Score = 113 bits (281), Expect = 5e-023
Identities = 83/250 (33%), Positives = 121/250 (48%), Gaps = 42/250 (16%)
Frame = +1
Query: 148 ICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKMTGLE 321
I + D WI L V DYF+ +PFYD +CNNEI++ + + P QL+ MTG+E
Sbjct: 6 ISWHDSAWIPM--LSPANVLDYFSERTNPFYDKSCNNEIIKMQRLSP---EQLNNMTGME 60
Query: 322 YVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAVYHIS 501
Y++ A EP L+V RKQ R ++VTP+ YYI+ G +YQAP L SV +R+ ++++I
Sbjct: 61 YILLHAQEPILYVVRKQHRHSQQQVTPLADYYIIAGVVYQAPDLYSVLNSRLLTSLHNIQ 120
Query: 502 NAFSVA-------ASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKL 660
+AF A SK + D + + K E + +RVD++L L K
Sbjct: 121 SAFDEALSYSRYHPSKGYWWEFKDKEDKKREGGKKKPEEMSSAFQRQRVDMLLGELADKF 180
Query: 661 PP--APP-----PPPFPEG------------YVSQEALGENEEELGTQGGESQQPQIDPI 783
PP A P P P E S++ +N G++ +S QP
Sbjct: 181 PPKFAQPKRGDQPVPVEEDRKPGEQAAQVKEEKSEDTPNQNHSSSGSRSNQSMQP----- 235
Query: 784 IDQGPAKRMK 813
P KRMK
Sbjct: 236 ----PEKRMK 241
>tr|B3DLE4|B3DLE4_XENTR Mediator of RNA polymerase II transcription, subunit 6
homolog (Yeast) OS=Xenopus tropicalis GN=med6 PE=2 SV=1
Length = 246
Score = 107 bits (267), Expect = 2e-021
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Frame = +1
Query: 136 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKM 309
++ GI + D WI L+ V DYF+ +PFYD TCNNE+++ + + LDH L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNNGTVLDYFSERSNPFYDRTCNNEVVKMQRL-TLDH--LNQM 63
Query: 310 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 489
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIEYILLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 490 YHISNAFSVAASKLETIKQV----DAKSQNEASETKPASE 597
+ I +AF A S K Q E +TKP ++
Sbjct: 124 HGIQSAFDEAMSYCRYHPSKGYWWHFKDQEERDKTKPKAK 163
>tr|B5FYR7|B5FYR7_TAEGU Putative mediator of RNA polymerase II transcription
subunit 6 homolog OS=Taeniopygia guttata PE=2 SV=1
Length = 245
Score = 106 bits (263), Expect = 6e-021
Identities = 65/160 (40%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Frame = +1
Query: 136 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKM 309
++ GI + D WI L+ V DYF+ +PFYD TCNNE+++ + + LDH L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNNGSVLDYFSERSNPFYDRTCNNEVVKMQRM-TLDH--LNQM 63
Query: 310 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 489
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGVEYILLHAQEPILFIIRKQQRQSPTQVMPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 490 YHISNAFSVAASKLETIKQV----DAKSQNEASETKPASE 597
+ I +AF A S K + E +TKP ++
Sbjct: 124 HGIQSAFEEAMSYCRYHPSKGYWWHFKDEEEREKTKPKAK 163
>tr|B4E2P0|B4E2P0_HUMAN cDNA FLJ59149, highly similar to RNA polymerase
transcriptional regulation mediator, subunit 6 homolog OS=Homo sapiens
PE=2 SV=1
Length = 181
Score = 104 bits (258), Expect = 2e-020
Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Frame = +1
Query: 136 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKM 309
++ GI + D WI L+ V DYF+ +PFYD TCNNE+++ + + L+H L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQM 63
Query: 310 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 489
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIEYILLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 490 YHISNAFSVAAS 525
+ I +AF A S
Sbjct: 124 HGIQSAFDEAMS 135
>tr|B0BNE1|B0BNE1_RAT Mediator complex subunit 6 OS=Rattus norvegicus GN=Med6
PE=2 SV=1
Length = 246
Score = 104 bits (258), Expect = 2e-020
Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Frame = +1
Query: 136 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKM 309
++ GI + D WI L+ V DYF+ +PFYD TCNNE+++ + + L+H L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQM 63
Query: 310 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 489
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIEYILLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 490 YHISNAFSVAAS 525
+ I +AF A S
Sbjct: 124 HGIQSAFDEAMS 135
>tr|C1C411|C1C411_RANCA Mediator of RNA polymerase II transcription subunit 6
OS=Rana catesbeiana GN=MED6 PE=2 SV=1
Length = 246
Score = 104 bits (257), Expect = 3e-020
Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 9/133 (6%)
Frame = +1
Query: 136 DMTGICFRDQLWINSYPLDRNY-VFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSK 306
++ GI + D WI P+ N V DYF+ +PFYD TCNNE+++ + + LDH L++
Sbjct: 9 NLLGISWVDSAWI---PILNNVTVLDYFSERSNPFYDRTCNNEVVKMQRL-TLDH--LNQ 62
Query: 307 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 486
MTG+EY++ A EP LF+ RKQ+R P + P+ YYI+ G IYQAP L SV +R+ A
Sbjct: 63 MTGVEYILLHAQEPILFIIRKQQRQTPTQAIPLADYYIIAGVIYQAPDLGSVINSRLLTA 122
Query: 487 VYHISNAFSVAAS 525
V+ I +AF A S
Sbjct: 123 VHGIQSAFDEAMS 135
>tr|B3S0T2|B3S0T2_TRIAD Putative uncharacterized protein (Fragment)
OS=Trichoplax adhaerens GN=TRIADDRAFT_16220 PE=4 SV=1
Length = 185
Score = 103 bits (256), Expect = 4e-020
Identities = 53/126 (42%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Frame = +1
Query: 154 FRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKMTGLEYV 327
++D WI + D V DYF+ +PFYD TCNNE+++ + L+ S+L +TG+EY
Sbjct: 5 WQDSNWIPNLTPDN--VLDYFSQRSNPFYDRTCNNEVIK---MQRLEASRLKSLTGIEYD 59
Query: 328 ISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNA 507
+ +P L++ RKQ R P +VTP+ YY+L G +YQAP L SV +R+ A+YHI +A
Sbjct: 60 LIHVQDPILYIIRKQHRHSPTEVTPLAEYYVLAGVVYQAPDLASVLNSRLLSALYHIQSA 119
Query: 508 FSVAAS 525
++ A S
Sbjct: 120 YNEAMS 125
>tr|D2HVR5|D2HVR5_AILME Putative uncharacterized protein (Fragment)
OS=Ailuropoda melanoleuca GN=PANDA_016487 PE=4 SV=1
Length = 239
Score = 103 bits (255), Expect = 5e-020
Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
Frame = +1
Query: 145 GICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKMTGL 318
GI + D WI L+ V DYF+ +PFYD TCNNE+++ + + L+H L++M G+
Sbjct: 5 GISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQMVGV 59
Query: 319 EYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAVYHI 498
EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV+ I
Sbjct: 60 EYILLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGI 119
Query: 499 SNAFSVAAS 525
+AF A S
Sbjct: 120 QSAFDEAMS 128
>tr|A8K3N2|A8K3N2_HUMAN cDNA FLJ76264, highly similar to Homo sapiens mediator
of RNA polymerase II transcription, subunit 6 homolog (yeast) (MED6),
mRNA OS=Homo sapiens PE=2 SV=1
Length = 246
Score = 102 bits (254), Expect = 6e-020
Identities = 58/132 (43%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Frame = +1
Query: 136 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEILRRRSVHPLDHSQLSKM 309
++ GI + D WI L+ V DYF+ +PFYD TCNNE+++ + + L+H L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQM 63
Query: 310 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 489
G++Y++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIKYILLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 490 YHISNAFSVAAS 525
+ I +AF A S
Sbjct: 124 HGIQSAFDEAMS 135
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,105,920,195,992
Number of Sequences: 11397958
Number of Extensions: 2105920195992
Number of Successful Extensions: 727328417
Number of sequences better than 0.0: 0
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