BLASTX 7.6.2
Query= UN25600 /QuerySize=942
(941 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G09830.1 | Symbols: | FUNCTIONS IN: molecular... 340 1e-093
TAIR9_protein||AT5G64780.1 | Symbols: | FUNCTIONS IN: molecular... 139 4e-033
>TAIR9_protein||AT4G09830.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G64780.1); Has 56 Blast hits to 56 proteins in 10 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:6188866-6190591
FORWARD
Length = 192
Score = 340 bits (870), Expect = 1e-093
Identities = 170/192 (88%), Positives = 176/192 (91%), Gaps = 4/192 (2%)
Frame = -2
Query: 787 MGKKRKATATSLDEVDRTVYASFRTAANSLSQLYTQSMNHQKLSFQAGERHGLEKLYQWI 608
MGKKRK+TATSLDEVDRTVYASFRTAANSLSQLYTQSMNHQKLSFQAGERHGLEKLYQWI
Sbjct: 1 MGKKRKSTATSLDEVDRTVYASFRTAANSLSQLYTQSMNHQKLSFQAGERHGLEKLYQWI 60
Query: 607 WRQQEGGSRVTSMDIINYIQNELECCTEEPPISPRAPPTQPAM---NAGLMASSGTSCPT 437
WRQQEGGSRVT MDI+NYIQNELECC +EPPISPRAPP QP M N GLM +SGTS PT
Sbjct: 61 WRQQEGGSRVTPMDIVNYIQNELECCIDEPPISPRAPPPQPTMHVTNPGLMTTSGTSFPT 120
Query: 436 AVPVVRSEQCENQVKNSVFSNALSSPIRRSLQNYQIPQGGYIS-GATRSSELNRGSNSPG 260
AVPVVRSEQCENQ KNSVFSNALSSPIRRSLQNYQIPQGGY S G TRSSE+NRGSNSPG
Sbjct: 121 AVPVVRSEQCENQAKNSVFSNALSSPIRRSLQNYQIPQGGYTSGGTTRSSEVNRGSNSPG 180
Query: 259 SFDSSMDMHAD* 224
S DSSMDMHA+*
Sbjct: 181 SIDSSMDMHAE* 192
>TAIR9_protein||AT5G64780.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G09830.1); Has 56 Blast hits to 56 proteins in 10 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:25900700-25901955 REVERSE
Length = 176
Score = 139 bits (348), Expect = 4e-033
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Frame = -2
Query: 787 MGKKRKATATSLDEVDRTVYASFRTAANSLSQLYTQSMNHQKLSFQAGERHGLEKLYQWI 608
MGKKRK+ AT LDEVDRT+Y +FR AANSLSQLYT +MNHQ++SF AGER G+EKLYQWI
Sbjct: 1 MGKKRKSEATRLDEVDRTMYGAFRGAANSLSQLYTHAMNHQRVSFLAGERRGMEKLYQWI 60
Query: 607 WRQQEGGSRVTSMDIINYIQNELECCTEEPPIS-PRAPPTQPAMNAGLMASSGTSCPTAV 431
RQ+E G+RV++ DI Y+QN LE EE I P Q + +S P++
Sbjct: 61 VRQEEQGTRVSTADITTYLQNALEYEPEETSIPLPMQEFYQHQFAPPNVNTSVAHVPSSH 120
Query: 430 PVVRSEQCENQVKNSVFSNALSSPIRRSLQNYQI 329
+ NQ K + N LSSP+RR+LQ++ +
Sbjct: 121 IAQQQHYDCNQEKLLIPPNGLSSPVRRTLQDFNL 154
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,133,434,822
Number of Sequences: 33410
Number of Extensions: 13133434822
Number of Successful Extensions: 418659561
Number of sequences better than 0.0: 0
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