Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN25647


BLASTX 7.6.2

Query= UN25647 /QuerySize=769
        (768 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G39880.1 | Symbols:  | ribosomal protein L23 f...    308   3e-084

>TAIR9_protein||AT4G39880.1 | Symbols:  | ribosomal protein L23 family protein |
        chr4:18504601-18505137 FORWARD

          Length = 179

 Score =  308 bits (788), Expect = 3e-084
 Identities = 157/181 (86%), Positives = 166/181 (91%), Gaps = 3/181 (1%)
 Frame = +3

Query:  42 MSSRLGRRVVHFANLPIKLLMPTKLTNIHEFALKTIPSATKIEIKRVLESLYGFEVEKVN 221
           M SRLG RVVHFANLPIKLLMP KLTNIHEFALKTIPSA+KIEIKRVLESLYGF+VEKVN
Sbjct:   1 MGSRLGGRVVHFANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVN 60

Query: 222 TLNMDGKKKKRGGLLIAKADYKKAYVTLKNPLSISKDLFPVKYIEEDRKSKVKGSSFVEE 401
           TLNMDGKKKKRGGLLIAKADYKKAYVTL++PLSIS+DLFPVKYIEEDRKSKVKGSSFVEE
Sbjct:  61 TLNMDGKKKKRGGLLIAKADYKKAYVTLRSPLSISRDLFPVKYIEEDRKSKVKGSSFVEE 120

Query: 402 EDDKKSHWLDQKEKREIGGYRNGKSRRGGGSERSTSPARASAAASG-AKFPWSSMRFGGK 578
           EDDKKSHWLD+KEKREIGGY  GK RRGG  ER+ SP R  AAA+G AKFPWS+MRF GK
Sbjct: 121 EDDKKSHWLDRKEKREIGGYGKGKGRRGG--ERANSPTRGGAAAAGTAKFPWSNMRFVGK 178

Query: 579 * 581
           *
Sbjct: 179 * 179

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,176,255,413
Number of Sequences: 33410
Number of Extensions: 13176255413
Number of Successful Extensions: 418697690
Number of sequences better than 0.0: 0