BLASTX 7.6.2
Query= UN25756 /QuerySize=740
(739 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297795441|ref|XP_002865605.1| predicted protein [Arabidopsis ... 83 3e-014
gi|297808923|ref|XP_002872345.1| hypothetical protein ARALYDRAFT... 80 3e-013
gi|297795609|ref|XP_002865689.1| predicted protein [Arabidopsis ... 78 1e-012
gi|297797665|ref|XP_002866717.1| hypothetical protein ARALYDRAFT... 77 3e-012
gi|75170581|sp|Q9FHA3.1|DPOLA_ARATH RecName: Full=DNA polymerase... 72 7e-011
gi|334188684|ref|NP_201511.2| DNA polymerase alpha catalytic sub... 72 7e-011
gi|225438746|ref|XP_002277947.1| PREDICTED: hypothetical protein... 72 9e-011
gi|296082407|emb|CBI21412.3| unnamed protein product [Vitis vini... 72 9e-011
gi|300681493|emb|CBH32589.1| DNA polymerase alpha catalytic subu... 64 2e-008
gi|300681495|emb|CBH32591.1| unnamed protein product [Triticum a... 64 2e-008
gi|242059369|ref|XP_002458830.1| hypothetical protein SORBIDRAFT... 62 6e-008
gi|300681492|emb|CBH32588.1| DNA polymerase alpha catalytic subu... 62 1e-007
gi|85541645|sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase... 61 1e-007
gi|56784778|dbj|BAD81999.1| putative DNA polymerase alpha cataly... 61 1e-007
gi|115441281|ref|NP_001044920.1| Os01g0868300 [Oryza sativa Japo... 61 1e-007
gi|218189439|gb|EEC71866.1| hypothetical protein OsI_04575 [Oryz... 61 1e-007
gi|344281790|ref|XP_003412660.1| PREDICTED: hypothetical protein... 57 3e-006
gi|76631359|ref|XP_612879.2| PREDICTED: zinc finger CCCH-type co... 55 7e-006
>gi|297795441|ref|XP_002865605.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1449
Score = 83 bits (204), Expect = 3e-014
Identities = 40/49 (81%), Positives = 42/49 (85%), Gaps = 4/49 (8%)
Frame = +2
Query: 368 LIVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSHT 502
L+ R YAF+RPDVPAGEQYVLKINYPFKDP LKGESFCAVLGSHT
Sbjct: 411 LVKRNYAFDRPDVPAGEQYVLKINYPFKDPPLPEDLKGESFCAVLGSHT 459
>gi|297808923|ref|XP_002872345.1| hypothetical protein ARALYDRAFT_327035
[Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 80 bits (196), Expect = 3e-013
Identities = 39/49 (79%), Positives = 41/49 (83%), Gaps = 4/49 (8%)
Frame = +2
Query: 368 LIVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSHT 502
L+ R YAF+RPDVPA EQYVLKINYPFKDP LKGESFCAVLGSHT
Sbjct: 357 LVKRNYAFDRPDVPAREQYVLKINYPFKDPPLPEDLKGESFCAVLGSHT 405
>gi|297795609|ref|XP_002865689.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1550
Score = 78 bits (191), Expect = 1e-012
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = +2
Query: 368 LIVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSHTRCTLIALSRGS 535
++ R YAF+RPDVP G+QYVLKINY FKDP LKGESFC VLGSHT + + +
Sbjct: 530 IVKRNYAFDRPDVPTGQQYVLKINYSFKDPPLPEDLKGESFCTVLGSHTSALELFILKRK 589
Query: 536 SQSHPPSKVIIREAPSQALTTQDHVGTMEL*LVVSLC*EKE 658
K+ + PSQ ++ T+E V+++ KE
Sbjct: 590 IMGPSWLKISVFSPPSQRVSWCKCEVTVESPKVITVSIPKE 630
>gi|297797665|ref|XP_002866717.1| hypothetical protein ARALYDRAFT_332862
[Arabidopsis lyrata subsp. lyrata]
Length = 1492
Score = 77 bits (187), Expect = 3e-012
Identities = 38/53 (71%), Positives = 43/53 (81%), Gaps = 5/53 (9%)
Frame = +2
Query: 356 SLSPLIVRKYAFERPDVPAGEQYVLKINYPFKD----PALKGESFCAVLGSHT 502
S++P + R YAFERPDVP GEQYV+KINYPFKD LKGESFCA+LGSHT
Sbjct: 451 SMAP-VKRNYAFERPDVPTGEQYVMKINYPFKDRPLPEDLKGESFCALLGSHT 502
>gi|75170581|sp|Q9FHA3.1|DPOLA_ARATH RecName: Full=DNA polymerase alpha
catalytic subunit
Length = 1492
Score = 72 bits (175), Expect = 7e-011
Identities = 38/53 (71%), Positives = 42/53 (79%), Gaps = 5/53 (9%)
Frame = +2
Query: 356 SLSPLIVRKYAFERPDVPAGEQYVLKINYPFKD----PALKGESFCAVLGSHT 502
S++P + R YAFERPDVPAGEQYVLKINY FKD LKGESF A+LGSHT
Sbjct: 449 SMAP-VKRNYAFERPDVPAGEQYVLKINYSFKDRPLPEDLKGESFSALLGSHT 500
>gi|334188684|ref|NP_201511.2| DNA polymerase alpha catalytic subunit
[Arabidopsis thaliana]
Length = 1524
Score = 72 bits (175), Expect = 7e-011
Identities = 38/53 (71%), Positives = 42/53 (79%), Gaps = 5/53 (9%)
Frame = +2
Query: 356 SLSPLIVRKYAFERPDVPAGEQYVLKINYPFKD----PALKGESFCAVLGSHT 502
S++P + R YAFERPDVPAGEQYVLKINY FKD LKGESF A+LGSHT
Sbjct: 449 SMAP-VKRNYAFERPDVPAGEQYVLKINYSFKDRPLPEDLKGESFSALLGSHT 500
>gi|225438746|ref|XP_002277947.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 1491
Score = 72 bits (174), Expect = 9e-011
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +2
Query: 356 SLSPLIVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSHTRCTLIAL 523
S++P + R YAFER D+P GE YVLKINYPFKDP LKGE+FCA+LG+H C+ + L
Sbjct: 445 SMTP-VKRSYAFERADIPVGENYVLKINYPFKDPPLPADLKGEAFCALLGTH--CSALEL 501
>gi|296082407|emb|CBI21412.3| unnamed protein product [Vitis vinifera]
Length = 1561
Score = 72 bits (174), Expect = 9e-011
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 7/60 (11%)
Frame = +2
Query: 356 SLSPLIVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSHTRCTLIAL 523
S++P + R YAFER D+P GE YVLKINYPFKDP LKGE+FCA+LG+H C+ + L
Sbjct: 445 SMTP-VKRSYAFERADIPVGENYVLKINYPFKDPPLPADLKGEAFCALLGTH--CSALEL 501
>gi|300681493|emb|CBH32589.1| DNA polymerase alpha catalytic
subunit,putative,expressed [Triticum aestivum]
Length = 1516
Score = 64 bits (154), Expect = 2e-008
Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER DVP GEQYVLKINYP+KDPA L+GE F A+LG++
Sbjct: 445 VKRNYAFERTDVPIGEQYVLKINYPYKDPAVPADLRGEHFHALLGTN 491
>gi|300681495|emb|CBH32591.1| unnamed protein product [Triticum aestivum]
Length = 1016
Score = 64 bits (154), Expect = 2e-008
Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER DVP GEQYVLKINYP+KDPA L+GE F A+LG++
Sbjct: 491 VKRNYAFERTDVPIGEQYVLKINYPYKDPAVPADLRGEHFHALLGTN 537
>gi|242059369|ref|XP_002458830.1| hypothetical protein SORBIDRAFT_03g041040
[Sorghum bicolor]
Length = 1541
Score = 62 bits (150), Expect = 6e-008
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER D+P GEQYVLKINYP+KDPA L+GE F A+LG++
Sbjct: 468 VKRNYAFERTDLPNGEQYVLKINYPYKDPALPADLRGEHFHALLGTN 514
>gi|300681492|emb|CBH32588.1| DNA polymerase alpha catalytic
subunit,putative,expressed [Triticum aestivum]
Length = 1369
Score = 62 bits (148), Expect = 1e-007
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER DVP GEQYVLK+NYP+KDPA L+G+ F A+LG++
Sbjct: 359 VKRNYAFERTDVPIGEQYVLKVNYPYKDPAVPADLRGKYFHALLGTN 405
>gi|85541645|sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha
catalytic subunit
Length = 1534
Score = 61 bits (147), Expect = 1e-007
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER D+P GEQYVLKINYP+KDPA L+G+ F A+LG++
Sbjct: 461 VKRNYAFERTDLPNGEQYVLKINYPYKDPALPTDLRGQHFHALLGTN 507
>gi|56784778|dbj|BAD81999.1| putative DNA polymerase alpha catalytic subunit
[Oryza sativa Japonica Group]
Length = 1532
Score = 61 bits (147), Expect = 1e-007
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER D+P GEQYVLKINYP+KDPA L+G+ F A+LG++
Sbjct: 461 VKRNYAFERTDLPNGEQYVLKINYPYKDPALPTDLRGQHFHALLGTN 507
>gi|115441281|ref|NP_001044920.1| Os01g0868300 [Oryza sativa Japonica Group]
Length = 1244
Score = 61 bits (147), Expect = 1e-007
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER D+P GEQYVLKINYP+KDPA L+G+ F A+LG++
Sbjct: 171 VKRNYAFERTDLPNGEQYVLKINYPYKDPALPTDLRGQHFHALLGTN 217
>gi|218189439|gb|EEC71866.1| hypothetical protein OsI_04575 [Oryza sativa Indica
Group]
Length = 1532
Score = 61 bits (147), Expect = 1e-007
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER D+P GEQYVLKINYP+KDPA L+G+ F A+LG++
Sbjct: 461 VKRNYAFERTDLPNGEQYVLKINYPYKDPALPTDLRGQHFHALLGTN 507
>gi|344281790|ref|XP_003412660.1| PREDICTED: hypothetical protein LOC100666085
[Loxodonta africana]
Length = 1656
Score = 57 bits (135), Expect = 3e-006
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = -3
Query: 305 REETLREIRVGRREGLREMRER*ERDRWRDSLRGDERV*ERDRWIDEDELREERDRRRRR 126
+E L R RE RE ERDR RD R ER ERDR + + REER+R R R
Sbjct: 703 KERELERERAREREREREKERDRERDRDRDHERERERERERDREKEREREREERERERER 762
Query: 125 ERSKPKSEEMRDRAGDDARDGEERDRRMMSMRRERERDD 9
ER + + E R+R RD +ER+R+ +++ R+D
Sbjct: 763 ERERERERE-RERERARERD-KERERQREWEDKDKGRED 799
>gi|76631359|ref|XP_612879.2| PREDICTED: zinc finger CCCH-type containing 13
isoform 1 [Bos taurus]
Length = 1652
Score = 55 bits (132), Expect = 7e-006
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = -3
Query: 305 REETLREIRVGRREGLREMRER*ERDRWRDSLRGDERV*ERDRWIDEDELREERDRRRRR 126
R + R+ R R+ RE ER+R RD R ER ER+R E E ER++ R R
Sbjct: 668 RTDDRRDERARERDRERERERERERERERDREREKERELERERAAREREREREREKERDR 727
Query: 125 ERSKPKSEEMRDRAGDDARDGE-ERDRRMMSMRRERERD 12
ER + + E R+R + R+ E ER+R RERER+
Sbjct: 728 ERERDR-EHDREREREREREREKEREREREERERERERE 765
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,061,447,628,928
Number of Sequences: 15229318
Number of Extensions: 3061447628928
Number of Successful Extensions: 717782310
Number of sequences better than 0.0: 0
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