BLASTX 7.6.2
Query= UN25756 /QuerySize=740
(739 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FHA3|DPOLA_ARATH DNA polymerase alpha catalytic subunit OS=... 72 3e-012
sp|O48653|DPOLA_ORYSJ DNA polymerase alpha catalytic subunit OS=... 61 6e-009
sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein... 61 8e-009
sp|B2RY56|RBM25_MOUSE RNA-binding protein 25 OS=Mus musculus GN=... 57 1e-007
sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=... 56 2e-007
>sp|Q9FHA3|DPOLA_ARATH DNA polymerase alpha catalytic subunit OS=Arabidopsis
thaliana GN=POLA PE=3 SV=1
Length = 1492
Score = 72 bits (175), Expect = 3e-012
Identities = 38/53 (71%), Positives = 42/53 (79%), Gaps = 5/53 (9%)
Frame = +2
Query: 356 SLSPLIVRKYAFERPDVPAGEQYVLKINYPFKD----PALKGESFCAVLGSHT 502
S++P + R YAFERPDVPAGEQYVLKINY FKD LKGESF A+LGSHT
Sbjct: 449 SMAP-VKRNYAFERPDVPAGEQYVLKINYSFKDRPLPEDLKGESFSALLGSHT 500
>sp|O48653|DPOLA_ORYSJ DNA polymerase alpha catalytic subunit OS=Oryza sativa
subsp. japonica GN=Os01g0868300 PE=2 SV=2
Length = 1534
Score = 61 bits (147), Expect = 6e-009
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +2
Query: 371 IVRKYAFERPDVPAGEQYVLKINYPFKDPA----LKGESFCAVLGSH 499
+ R YAFER D+P GEQYVLKINYP+KDPA L+G+ F A+LG++
Sbjct: 461 VKRNYAFERTDLPNGEQYVLKINYPYKDPALPTDLRGQHFHALLGTN 507
>sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo
sapiens GN=ZC3H13 PE=1 SV=1
Length = 1668
Score = 61 bits (146), Expect = 8e-009
Identities = 48/117 (41%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = -3
Query: 353 RASKG*ESESNNLYLFREETLREIRVGRREGLREMRER-*ERDRWRDSLRGDERV*ERDR 177
R S + N L R+E E RV R + R+ R R +R+R RD R ER ERDR
Sbjct: 640 RPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDR 699
Query: 176 WID-EDELREERDRRRRRERSKPKSEEMRDRAGDDARDGEERDRRMMSMRRERERDD 9
+ E EL ER R R RER K + E RDR D R+ E R RERER++
Sbjct: 700 EREKERELERERAREREREREKERDRE-RDRDRDHDRERERERERDREKEREREREE 755
Score = 57 bits (137), Expect = 9e-008
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = -3
Query: 305 REETLREIRVGRREGLREMRER*ERDRWRDSLRGDERV*ERDRWIDEDELREERDRRRRR 126
+E L R RE RE ERDR RD R ER ERDR + + REER+R R R
Sbjct: 703 KERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERER 762
Query: 125 ERSKPKSEEMRDRAGDDARDGEERDRRMMSMRRERERDD 9
ER + + E R+R RD +ER+R+ +++ RDD
Sbjct: 763 ERERERERE-RERERARERD-KERERQRDWEDKDKGRDD 799
Score = 51 bits (121), Expect = 6e-006
Identities = 52/132 (39%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Frame = -3
Query: 374 QSEEISFRASKG*ESESNNLYLFREETLREIRVGRREGLREMRER*ER------DRWRDS 213
Q+ + SF G +N RE R R +G + ER ER DR D
Sbjct: 616 QARDSSFERRHGERDRRDN----RERDQRPSSPIRHQGRNDELERDERREERRVDRVDD- 670
Query: 212 LRGDERV*ERDRWIDEDELRE-ERDRRRRRERSKPKSEEMRDRAGDDARDGE-ERDR--- 48
R DER ERDR + D RE ER+R R RER K + E R+RA + R+ E ERDR
Sbjct: 671 -RRDERARERDRERERDRERERERERERDREREKERELE-RERAREREREREKERDRERD 728
Query: 47 RMMSMRRERERD 12
R RERER+
Sbjct: 729 RDRDHDRERERE 740
>sp|B2RY56|RBM25_MOUSE RNA-binding protein 25 OS=Mus musculus GN=Rbm25 PE=1
SV=1
Length = 841
Score = 57 bits (136), Expect = 1e-007
Identities = 51/131 (38%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Frame = -3
Query: 371 SEEIS-FR-ASKG*ESESNNLYLFREETLREIRVGRREGLREMRER*ERDRWRDSLRGDE 198
S EIS FR K E E R+E +E R RE RE RER ER+R R+ R E
Sbjct: 280 SREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERE-RERRERERERERERERE 338
Query: 197 RV*ERDRWIDEDELRE---------ERDRRRRRERSKPKSEEMRDRAGDDARDGEERDRR 45
+ ER+R + D R+ ERDR R RERS ++++ R R+ + +RD E R
Sbjct: 339 KEKERERERERDRDRDRTKERDRDRERDRDRDRERSSDRNKD-RSRSREKSRDRERERER 397
Query: 44 MMSMRRERERD 12
RERER+
Sbjct: 398 ERERERERERE 408
Score = 55 bits (132), Expect = 3e-007
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = -2
Query: 360 KLQSFKGLRE*EQQSLSLP*RDSERDKSGSSRGSERDEREMRERSMERLFERR*ESLRER 181
KL+ KG +E E+Q + R+ ER++ ER+ RER E+ ER E R+R
Sbjct: 292 KLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDR 351
Query: 180 SMDR*RRVER-RERSASEKREIETQIGGDERSSRR*CERWRRERSAYDVDEKRERER 13
DR + +R RER RE + D SR RER + + +RERER
Sbjct: 352 DRDRTKERDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERER-ERERERERER 407
Score = 52 bits (124), Expect = 3e-006
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Frame = -3
Query: 305 REETLREIRVGRREGLREMRER*ERDRWRDSLRGDERV*ERDRWIDEDELREERDRRRRR 126
RE RE R RE RE + ER+R R+ R +R ERDR + E +RDR R
Sbjct: 320 RERERRE-REREREREREREKEKERERERERDRDRDRTKERDR---DRERDRDRDRERSS 375
Query: 125 ERSKPKS---EEMRDRAGDDARDGEERDRRMMSMRRERERD 12
+R+K +S E+ RDR + R+ E R RERER+
Sbjct: 376 DRNKDRSRSREKSRDRERERERERERERERERERERERERE 416
>sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1
SV=3
Length = 843
Score = 56 bits (134), Expect = 2e-007
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Frame = -3
Query: 371 SEEIS-FR-ASKG*ESESNNLYLFREETLREIRVGRREGLREMRER*ERDRWRDSLRGDE 198
S EIS FR K E E R+E +E R RE RE RER ER+R R+ R E
Sbjct: 278 SREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERE-RERRERERERERERERE 336
Query: 197 RV*ERDRWIDEDELRE-----------ERDRRRRRERSKPKSEEMRDRAGDDARDGEERD 51
+ ER+R + D R+ ERDR R RERS ++++ R R+ + +RD E
Sbjct: 337 KEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKD-RSRSREKSRDRERER 395
Query: 50 RRMMSMRRERERD 12
R RERER+
Sbjct: 396 ERERERERERERE 408
Score = 54 bits (128), Expect = 1e-006
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Frame = -3
Query: 305 REETLREIRVGRREGLREMRER*ERDRWRDSLRGDERV*ERDRWIDEDELRE-ERDRRRR 129
RE RE R RE RE + ER+R R+ R +R ERDR D D R+ +RDR R
Sbjct: 318 RERERRE-REREREREREREKEKERERERERDRDRDRTKERDR--DRDRERDRDRDRERS 374
Query: 128 RERSKPKS---EEMRDRAGDDARDGEERDRRMMSMRRERERD 12
+R+K +S E+ RDR + R+ E R RERER+
Sbjct: 375 SDRNKDRSRSREKSRDRERERERERERERERERERERERERE 416
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,282,147,502
Number of Sequences: 518415
Number of Extensions: 106282147502
Number of Successful Extensions: 672117376
Number of sequences better than 0.0: 0
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