BLASTX 7.6.2
Query= UN25894 /QuerySize=859
(858 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)... 390 7e-109
TAIR9_protein||AT1G63080.1 | Symbols: | pentatricopeptide (PPR)... 54 1e-007
TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)... 48 8e-006
>TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:16915860-16918238 FORWARD
Length = 710
Score = 390 bits (1001), Expect = 7e-109
Identities = 206/273 (75%), Positives = 228/273 (83%), Gaps = 13/273 (4%)
Frame = +1
Query: 34 LIQPPLVSSRFHSLYFIT---RPHHSFFQPPISAFSATAPCSPSSSSSSSSSSSSSTYFA 204
L QPPLVS+RFHSLYF+T HH FFQPPISAFSAT S+S S S SSSS+YF+
Sbjct: 4 LQQPPLVSTRFHSLYFLTHHHHHHHRFFQPPISAFSATT----SASLPSPSPSSSSSYFS 59
Query: 205 S------EEEEDDEFSTVVRRRFDFSPLLKFLSRFGPVELVLEPVNLEPTPAVTLDPVEL 366
S EEED+EFS+ V RR+DFSPLLKFLSRFGPVEL L+ + +L+PVE
Sbjct: 60 SWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRFGPVELALDSESESEASPESLNPVEF 119
Query: 367 ELAESYEAVPAPYWHSLLKSLCSSRSSLGLAYAVVSWLEKHNLCFSYELLYSILIHALGR 546
+L ESY AVPAPYWHSL+KSL SS SSLGLAYAVVSWL+KHNLCFSYELLYSILIHALGR
Sbjct: 120 DLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGR 179
Query: 547 SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIDKALNLISRMRQGGYQSDFVNYSLVI 726
SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDI+KALNLI++MRQ GYQSDFVNYSLVI
Sbjct: 180 SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVI 239
Query: 727 QALTRSNKIDSALLHSLYREIKHDKLELDVQLV 825
Q+LTRSNKIDS +L LY+EI+ DKLELDVQLV
Sbjct: 240 QSLTRSNKIDSVMLLRLYKEIERDKLELDVQLV 272
>TAIR9_protein||AT1G63080.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23388884-23390728 REVERSE
Length = 615
Score = 54 bits (127), Expect = 1e-007
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Frame = +1
Query: 517 YSILIHALGRSEKLYEAFLLSQKQTLTP-----LTYNALIGACARNNDIDKALNLISRMR 681
++ L+H L + K EA L ++ + +TY A+I + + D ALNL+++M
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 682 QGGYQSDFVNYSLVIQALTRSNKIDSALLHSLYREIKHDKLELDV 816
+G ++D V YS VI +L + +D AL +L+ E+ + + DV
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDAL--NLFTEMDNKGIRPDV 275
>TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23385324-23387167 REVERSE
Length = 591
Score = 48 bits (112), Expect = 8e-006
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Frame = +1
Query: 517 YSILIHALGRSEKLYEAFLLSQKQTLTP-----LTYNALIGACARNNDIDKALNLISRMR 681
++ L+H L + K EA L ++ + +TY A+I + + D ALNL+++M
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 682 QGGYQSDFVNYSLVIQALTRSNKIDSALLHSLYREIKHDKLELDV 816
+G ++D V Y+ +I L + +D A L+ +++ ++ DV
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAF--DLFNKMETKGIKPDV 285
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,262,207,182
Number of Sequences: 33410
Number of Extensions: 13262207182
Number of Successful Extensions: 418726680
Number of sequences better than 0.0: 0
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