BLASTX 7.6.2
Query= UN25952 /QuerySize=1217
(1216 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55480.1 | Symbols: | binding / protein bindi... 557 5e-159
TAIR9_protein||AT1G02910.1 | Symbols: LPA1 | LPA1 (LOW PSII ACCU... 55 1e-007
>TAIR9_protein||AT1G55480.1 | Symbols: | binding / protein binding |
chr1:20713822-20715351 FORWARD
Length = 336
Score = 557 bits (1435), Expect = 5e-159
Identities = 293/339 (86%), Positives = 309/339 (91%), Gaps = 13/339 (3%)
Frame = +1
Query: 106 MSLAPTSYPSLY---SLPRT-QTKQNPPLITQPSFISVKSLFLSS------NTHVA*RGS 255
MSLAP+SYPSLY SLPRT QTKQNP LITQ SFIS KSLFLSS NTHVA R +
Sbjct: 1 MSLAPSSYPSLYSSPSLPRTQQTKQNPSLITQSSFISAKSLFLSSNSASLCNTHVAKRRN 60
Query: 256 FALKASETDSTAKPEAGKEKDGGGEEEKYETYEIGVEQPYGLKFRKGRDGGTYIDAILPG 435
ALKASET+S+AK EAG + G EEEKYETYEI VEQPYGLKFRKGRDGGTYIDAILPG
Sbjct: 61 LALKASETESSAKAEAGGD---GEEEEKYETYEIEVEQPYGLKFRKGRDGGTYIDAILPG 117
Query: 436 GFADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRYGKVDDS 615
G ADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKR GK +D+
Sbjct: 118 GSADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRNGKAEDT 177
Query: 616 GELTEKEIIRAERNAGFISSRLREIQMQNYLRKKELKAQREKDLREGLQFSKNGKYEEAL 795
GELTEKEIIRAERNAG+ISSRLREIQMQNYL+KKE KAQREKDLREGLQFSKNGKYEEAL
Sbjct: 178 GELTEKEIIRAERNAGYISSRLREIQMQNYLKKKEQKAQREKDLREGLQFSKNGKYEEAL 237
Query: 796 ERFESLLGSKPTPDEASISSYNVACCYSKLNRVQAGLSALEEALKSGYEDFKRIRSDPDL 975
ERFES+LGSKPTP+EAS++SYNVACCYSKLN+VQAGLSALEEALKSGYEDFKRIRSDPDL
Sbjct: 238 ERFESVLGSKPTPEEASVASYNVACCYSKLNQVQAGLSALEEALKSGYEDFKRIRSDPDL 297
Query: 976 ENLRKSEAFDPLMKQFDESFINESAINAIKSLFGFNKK* 1092
E LRKS+ FDPL+KQFDESFINESAINAIKSLFGFNKK*
Sbjct: 298 ETLRKSKDFDPLLKQFDESFINESAINAIKSLFGFNKK* 336
>TAIR9_protein||AT1G02910.1 | Symbols: LPA1 | LPA1 (LOW PSII ACCUMULATION1);
binding | chr1:655749-658125 REVERSE
Length = 454
Score = 55 bits (130), Expect = 1e-007
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +1
Query: 754 GLQFSKNGKYEEALERFESLLGSKPTPDEASISSYNVACCYSKLNRVQAGLSALEEALKS 933
GL K G+ ++AL +FE+ L P P E+ + YN ACC++ + + L AL+
Sbjct: 82 GLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRD 141
Query: 934 GYEDFKRIRSDPDLENLRKSEAFDPLMKQ 1020
F I +DPDL + R F L ++
Sbjct: 142 YNLKFATILNDPDLASFRALPEFKELQEE 170
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,304,570,537
Number of Sequences: 33410
Number of Extensions: 13304570537
Number of Successful Extensions: 418736496
Number of sequences better than 0.0: 0
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