BLASTX 7.6.2
Query= UN25997 /QuerySize=650
(649 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15227556|ref|NP_180514.1| DNA-directed RNA polymerase III sub... 184 1e-044
gi|297822669|ref|XP_002879217.1| predicted protein [Arabidopsis ... 184 1e-044
gi|158828223|gb|ABW81101.1| RNApol24 [Cleome spinosa] 161 1e-037
gi|255630968|gb|ACU15848.1| unknown [Glycine max] 153 2e-035
gi|225434730|ref|XP_002281364.1| PREDICTED: hypothetical protein... 141 7e-032
gi|224059388|ref|XP_002299838.1| predicted protein [Populus tric... 135 5e-030
gi|242085108|ref|XP_002442979.1| hypothetical protein SORBIDRAFT... 133 2e-029
gi|115487728|ref|NP_001066351.1| Os12g0194700 [Oryza sativa Japo... 131 7e-029
gi|242068175|ref|XP_002449364.1| hypothetical protein SORBIDRAFT... 124 9e-027
gi|145329983|ref|NP_001077977.1| DNA-directed RNA polymerase III... 122 6e-026
gi|168025386|ref|XP_001765215.1| predicted protein [Physcomitrel... 121 1e-025
gi|116781945|gb|ABK22308.1| unknown [Picea sitchensis] 111 1e-022
gi|302815190|ref|XP_002989277.1| hypothetical protein SELMODRAFT... 102 4e-020
gi|302817582|ref|XP_002990466.1| hypothetical protein SELMODRAFT... 101 1e-019
gi|302804069|ref|XP_002983787.1| hypothetical protein SELMODRAFT... 99 4e-019
gi|255075357|ref|XP_002501353.1| predicted protein [Micromonas s... 97 1e-018
gi|159490407|ref|XP_001703168.1| RNA polymerase subunit [Chlamyd... 93 3e-017
gi|303286291|ref|XP_003062435.1| predicted protein [Micromonas p... 90 2e-016
gi|260812261|ref|XP_002600839.1| hypothetical protein BRAFLDRAFT... 89 6e-016
gi|325117253|emb|CBZ52805.1| DNA-directed RNA polymerase I 16 kD... 81 9e-014
>gi|15227556|ref|NP_180514.1| DNA-directed RNA polymerase III subunit C19
[Arabidopsis thaliana]
Length = 122
Score = 184 bits (466), Expect = 1e-044
Identities = 92/120 (76%), Positives = 105/120 (87%), Gaps = 7/120 (5%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGSFTN SHASFTL+EEDHTLANAVRF+LNQDPRVT+A Y+IPHPSLE VN+RVQTTG
Sbjct: 1 MEHGSFTNVSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQARLATEEEKNKKAEEEELKK*RDL 503
DPAREV KDACQELM MNRHVRSVFDKAV+E+K E+++ ++AEEEELK+ RDL
Sbjct: 61 DPAREVFKDACQELMQMNRHVRSVFDKAVAEYK-------DEQKRKEEAEEEELKRQRDL 113
>gi|297822669|ref|XP_002879217.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 122
Score = 184 bits (465), Expect = 1e-044
Identities = 92/120 (76%), Positives = 104/120 (86%), Gaps = 7/120 (5%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGSFTNDSHASFTL+EEDHTLANAVRF+LNQDPRVT+A Y+IPHPSLE VN+RVQTTG
Sbjct: 1 MEHGSFTNDSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQARLATEEEKNKKAEEEELKK*RDL 503
DPAREV KDACQELM MNRHVRSVFDKAV+E+K ++ ++AEEEELK+ RDL
Sbjct: 61 DPAREVFKDACQELMQMNRHVRSVFDKAVTEYK-------AAKKLKEEAEEEELKRQRDL 113
>gi|158828223|gb|ABW81101.1| RNApol24 [Cleome spinosa]
Length = 109
Score = 161 bits (405), Expect = 1e-037
Identities = 76/93 (81%), Positives = 84/93 (90%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGSFT+ SHA+F+L EEDHTLANAVRF+LNQDPRVT GYSIPHPS VN+RVQTTG
Sbjct: 1 MEHGSFTDHSHATFSLTEEDHTLANAVRFVLNQDPRVTFCGYSIPHPSHARVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFK 422
DPAREVLKDACQ+LMLMNRHVR VFD AV++FK
Sbjct: 61 DPAREVLKDACQDLMLMNRHVRGVFDNAVADFK 93
>gi|255630968|gb|ACU15848.1| unknown [Glycine max]
Length = 107
Score = 153 bits (386), Expect = 2e-035
Identities = 72/103 (69%), Positives = 87/103 (84%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGS+T+ S ++F+L +EDHT ANAVRF LNQDPRV+ GYSIPHPS VN+RVQTTG
Sbjct: 1 MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQARLATEE 452
DP+REVLKDACQ+LMLM +HVRS FDKAVS+FK+ +AR E+
Sbjct: 61 DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNED 103
>gi|225434730|ref|XP_002281364.1| PREDICTED: hypothetical protein isoform 2
[Vitis vinifera]
Length = 105
Score = 141 bits (355), Expect = 7e-032
Identities = 66/96 (68%), Positives = 82/96 (85%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGSF++ S ++F+L++EDHTLAN++RF LNQDPRV GYSIPHPS VN+RVQTTG
Sbjct: 1 MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQ 431
D AREVLKDACQ+LMLM +HVRS FDKAV ++K+ +
Sbjct: 61 DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSK 96
>gi|224059388|ref|XP_002299838.1| predicted protein [Populus trichocarpa]
Length = 102
Score = 135 bits (339), Expect = 5e-030
Identities = 65/102 (63%), Positives = 78/102 (76%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGS + S A+F +EDHTLAN+VRF LNQDPRV+ GYSIPHPS VN+RVQTTG
Sbjct: 1 MEHGSVRDPSSATFCFVDEDHTLANSVRFALNQDPRVSFCGYSIPHPSDAKVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQARLATE 449
DPAREVLKDACQ LM+M +HVRS DKAV +++ + T+
Sbjct: 61 DPAREVLKDACQNLMVMCQHVRSTLDKAVDDYRSNPTDMDTK 102
>gi|242085108|ref|XP_002442979.1| hypothetical protein SORBIDRAFT_08g005640
[Sorghum bicolor]
Length = 108
Score = 133 bits (334), Expect = 2e-029
Identities = 62/108 (57%), Positives = 83/108 (76%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGS + S ++F++ EEDHTLAN+VRF+LNQDPRV GYSIPHP+ VN+RVQTTG
Sbjct: 1 MEHGSLDDSSSSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPAENKVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQARLATEEEKNKK 467
DPA++VLKDA Q+LM+M +H+R D AV++F+ + A + + NKK
Sbjct: 61 DPAKDVLKDALQDLMVMCQHIRGTLDTAVADFRGNKTAEAMDIDLNKK 108
>gi|115487728|ref|NP_001066351.1| Os12g0194700 [Oryza sativa Japonica Group]
Length = 108
Score = 131 bits (329), Expect = 7e-029
Identities = 61/108 (56%), Positives = 82/108 (75%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGS T+ + ++F++ EEDHTLAN+VRF+LNQDPRV GYSIPHP+ VN+RVQTTG
Sbjct: 1 MEHGSVTDSTASTFSIVEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQARLATEEEKNKK 467
DPA++VLKD+ Q+LM+M +HVR FD AV++F+ ++ KK
Sbjct: 61 DPAKDVLKDSLQDLMVMCQHVRGTFDTAVTQFRQNNPTGMNIDQNKKK 108
>gi|242068175|ref|XP_002449364.1| hypothetical protein SORBIDRAFT_05g008640
[Sorghum bicolor]
Length = 107
Score = 124 bits (311), Expect = 9e-027
Identities = 57/95 (60%), Positives = 74/95 (77%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
MEHGS T+ + ++F++ EEDHTLAN+ RF+LNQDPRV GYSIPHP+ + VN+RVQTTG
Sbjct: 1 MEHGSLTDSTSSTFSIMEEDHTLANSARFVLNQDPRVAFCGYSIPHPAEKKVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVK 428
D A++VLKDA Q LM+M +HVR D AV+ + K
Sbjct: 61 DAAKDVLKDALQNLMIMCQHVRGTLDNAVANHRAK 95
>gi|145329983|ref|NP_001077977.1| DNA-directed RNA polymerase III subunit C19
[Arabidopsis thaliana]
Length = 139
Score = 122 bits (304), Expect = 6e-026
Identities = 61/86 (70%), Positives = 72/86 (83%), Gaps = 7/86 (8%)
Frame = +3
Query: 246 PRVTLAGYSIPHPSLECVNVRVQTTGDPAREVLKDACQELMLMNRHVRSVFDKAVSEFKV 425
PRVT+A Y+IPHPSLE VN+RVQTTGDPAREV KDACQELM MNRHVRSVFDKAV+E+K
Sbjct: 52 PRVTVAAYTIPHPSLEQVNIRVQTTGDPAREVFKDACQELMQMNRHVRSVFDKAVAEYK- 110
Query: 426 KQARLATEEEKNKKAEEEELKK*RDL 503
E+++ ++AEEEELK+ RDL
Sbjct: 111 ------DEQKRKEEAEEEELKRQRDL 130
>gi|168025386|ref|XP_001765215.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 118
Score = 121 bits (302), Expect = 1e-025
Identities = 56/96 (58%), Positives = 75/96 (78%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
ME GS T+ +A+F++++EDHTL N++RF+LN+DPRV GYS+PHPS +NVRVQTTG
Sbjct: 1 MELGSETDPRNATFSISDEDHTLGNSLRFVLNKDPRVAFCGYSVPHPSETRINVRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQ 431
PAR+VLKDA +LM MN+HV + F++AV FK Q
Sbjct: 61 VPARDVLKDALNDLMAMNQHVSTTFNRAVETFKANQ 96
>gi|116781945|gb|ABK22308.1| unknown [Picea sitchensis]
Length = 107
Score = 111 bits (276), Expect = 1e-022
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
ME GS N ++F +EDHTL N++R++LN DPRV GYSIPHPS VN+RVQTTG
Sbjct: 1 MELGSVENPRSSTFAFNDEDHTLGNSLRYVLNHDPRVEFCGYSIPHPSDNRVNIRVQTTG 60
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQA--RLATEEE 455
DPA++VLKDA Q+LM++ + VR F KAV F + ++TE +
Sbjct: 61 DPAKDVLKDALQDLMVVCQQVRQTFGKAVVTFNATRGVKEMSTESD 106
>gi|302815190|ref|XP_002989277.1| hypothetical protein SELMODRAFT_160051
[Selaginella moellendorffii]
Length = 101
Score = 102 bits (254), Expect = 4e-020
Identities = 49/96 (51%), Positives = 67/96 (69%)
Frame = +3
Query: 144 MEHGSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTG 323
+E GS ++F + +EDHT N++R++LN DPRVT GYS+PHPS VNVRVQTTG
Sbjct: 3 VELGSDVEPESSTFCINDEDHTFGNSIRYVLNGDPRVTFCGYSVPHPSDNRVNVRVQTTG 62
Query: 324 DPAREVLKDACQELMLMNRHVRSVFDKAVSEFKVKQ 431
+ A+ V KDA ++L+L+ HV S FD +V+ FK Q
Sbjct: 63 ESAKSVFKDALRDLVLICDHVCSAFDDSVASFKRSQ 98
>gi|302817582|ref|XP_002990466.1| hypothetical protein SELMODRAFT_49918
[Selaginella moellendorffii]
Length = 92
Score = 101 bits (249), Expect = 1e-019
Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +3
Query: 171 SHAS-FTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTGDPAREVLK 347
SH+S F EDHTL N++RF+LN+DPRV GYS+PHPS VNVRVQTTG PA+EV K
Sbjct: 1 SHSSTFCFNGEDHTLGNSLRFLLNKDPRVVFCGYSVPHPSENKVNVRVQTTGAPAKEVFK 60
Query: 348 DACQELMLMNRHVRSVFDKAVSEFKVKQAR 437
DA +++ + HV + D AV FK + R
Sbjct: 61 DALLDMVAICEHVSTTMDSAVERFKANEQR 90
>gi|302804069|ref|XP_002983787.1| hypothetical protein SELMODRAFT_49652
[Selaginella moellendorffii]
Length = 92
Score = 99 bits (245), Expect = 4e-019
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +3
Query: 171 SHAS-FTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTGDPAREVLK 347
SH+S F EDHTL N++RF+LN+DPRV GYS+PHPS VNVRVQTTG P +EV K
Sbjct: 1 SHSSTFCFNGEDHTLGNSLRFLLNKDPRVVFCGYSVPHPSENKVNVRVQTTGAPGKEVFK 60
Query: 348 DACQELMLMNRHVRSVFDKAVSEFKVKQAR 437
DA +++ + HV + D AV FK + R
Sbjct: 61 DALLDMVAICEHVSTTMDSAVGRFKANEQR 90
>gi|255075357|ref|XP_002501353.1| predicted protein [Micromonas sp. RCC299]
Length = 100
Score = 97 bits (241), Expect = 1e-018
Identities = 46/85 (54%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +3
Query: 180 SFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTGD-PAREVLKDAC 356
+FTL +EDHT+ NAVR+MLN++P+V+LAGYS+PHP + VNVRVQTTG+ A ++DA
Sbjct: 7 TFTLKDEDHTMGNAVRYMLNKNPQVSLAGYSVPHPMEKSVNVRVQTTGEVTATAAMRDAL 66
Query: 357 QELMLMNRHVRSVFDKAVSEFKVKQ 431
+++ + HV FD AV++FK KQ
Sbjct: 67 LDIISVCDHVHDTFDTAVADFKAKQ 91
>gi|159490407|ref|XP_001703168.1| RNA polymerase subunit [Chlamydomonas
reinhardtii]
Length = 99
Score = 93 bits (229), Expect = 3e-017
Identities = 46/94 (48%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = +3
Query: 153 GSFTNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTGDPA 332
G T+ A+F++ EEDHTLAN++RF LN++P V GYS+PHPS E VN+RVQTTG A
Sbjct: 3 GEATDFFAATFSIEEEDHTLANSLRFFLNKNPHVAFCGYSMPHPSEELVNLRVQTTG-AA 61
Query: 333 REVLKDACQELMLMNRHVRSVFDKAVSEFKVKQA 434
R +K AC+++ + H+RS AV +F+ ++A
Sbjct: 62 RGAVKAACEDVSQVCGHMRSTLQDAVHKFQAEEA 95
>gi|303286291|ref|XP_003062435.1| predicted protein [Micromonas pusilla
CCMP1545]
Length = 109
Score = 90 bits (221), Expect = 2e-016
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 180 SFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTGD-PAREVLKDAC 356
+FTL +EDHT+ NA+R+MLN++P+V LAGYS+PHP VNVRVQTTG+ A ++DA
Sbjct: 7 TFTLKDEDHTMGNAIRYMLNKNPQVALAGYSVPHPMERSVNVRVQTTGEVTATAAMRDAL 66
Query: 357 QELMLMNRHVRSVFDKAVSEFKVKQA 434
+++ + HV FD A+ E K A
Sbjct: 67 LDIISVCDHVHDTFDLAIEEHGEKNA 92
>gi|260812261|ref|XP_002600839.1| hypothetical protein BRAFLDRAFT_75869
[Branchiostoma floridae]
Length = 110
Score = 89 bits (218), Expect = 6e-016
Identities = 39/91 (42%), Positives = 63/91 (69%)
Frame = +3
Query: 162 TNDSHASFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTGDPAREV 341
+++S +F L +EDHTL NA+R+M+ ++P V GYS+PHPS +N+R+Q+ G PA ++
Sbjct: 6 SDESCQTFVLHDEDHTLGNALRYMIMKNPDVDFCGYSVPHPSEHKINLRIQSRGPPAADI 65
Query: 342 LKDACQELMLMNRHVRSVFDKAVSEFKVKQA 434
L+ EL + HV++ F+ AV E+K+ QA
Sbjct: 66 LRRGLTELNALCEHVQNTFEGAVEEYKMNQA 96
>gi|325117253|emb|CBZ52805.1| DNA-directed RNA polymerase I 16 kDa
polypeptide,related [Neospora caninum Liverpool]
Length = 129
Score = 81 bits (199), Expect = 9e-014
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +3
Query: 180 SFTLAEEDHTLANAVRFMLNQDPRVTLAGYSIPHPSLECVNVRVQTTGDPAREVLKDACQ 359
+FTL EDHTL NA+R +L + P V AGYS+PHP+ +N+R+QTTG+ A ++L+++
Sbjct: 38 TFTLTGEDHTLGNAIRSILVRKPGVEFAGYSVPHPTQPEMNIRLQTTGESAMQLLRESFD 97
Query: 360 ELMLMNRHVRSVFDKAVSEFKVKQ 431
+L + H+ +++D+A+ EF KQ
Sbjct: 98 DLANICDHLDTLYDEALEEFSRKQ 121
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,075,932,895,059
Number of Sequences: 15229318
Number of Extensions: 3075932895059
Number of Successful Extensions: 726375405
Number of sequences better than 0.0: 0
|
