Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN26136


BLASTX 7.6.2

Query= UN26136 /QuerySize=929
        (928 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G58640.1 | Symbols:  | selenoprotein-related |...    395   2e-110
TAIR9_protein||AT5G58640.2 | Symbols:  | selenoprotein-related |...    393   1e-109
TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PRO...    287   1e-077

>TAIR9_protein||AT5G58640.1 | Symbols:  | selenoprotein-related |
        chr5:23697996-23699505 FORWARD

          Length = 229

 Score =  395 bits (1014), Expect = 2e-110
 Identities = 191/227 (84%), Positives = 206/227 (90%), Gaps = 4/227 (1%)
 Frame = +2

Query:  83 MGRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRPNHPPHIPHQQPPPVVVP---DFPS 253
           M R+QL+L+GLPIFLFCSDLFNLFTPPPPKP  HRP+ PPHIPHQ  P  ++P   DFPS
Sbjct:   1 MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 254 QKQASGLGGAVGYGNTVEINFCVSCSFKGTAVNMKKMLETAFPGLDVVLANYPPPPPKRL 433
           QK  SGLGGA+GYGNTVEINFCVSCS+KGTAV MKKMLETAFPGLDV+LANYPPP PKRL
Sbjct:  61 QK-TSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 119

Query: 434 LAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRANRFGSMASTWLIGNFLQSYL 613
           LAKVVPV QMGVIGMIVAGDR+ PMIGI +PPAWF+SLRANRFGSMASTWLIGNFLQSYL
Sbjct: 120 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 179

Query: 614 QSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISKTLTKPSMVAGS 754
           QSSGAFEV CNGE VFSKLKEGRFPGEIELRDLISKTLT+PS++ GS
Sbjct: 180 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 226

>TAIR9_protein||AT5G58640.2 | Symbols:  | selenoprotein-related |
        chr5:23697996-23699505 FORWARD

          Length = 228

 Score =  393 bits (1008), Expect = 1e-109
 Identities = 190/227 (83%), Positives = 205/227 (90%), Gaps = 5/227 (2%)
 Frame = +2

Query:  83 MGRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRPNHPPHIPHQQPPPVVVP---DFPS 253
           M R+QL+L+GLPIFLFCSDLFNLFTPPPPKP  HRP+ PPHIPHQ  P  ++P   DFPS
Sbjct:   1 MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 254 QKQASGLGGAVGYGNTVEINFCVSCSFKGTAVNMKKMLETAFPGLDVVLANYPPPPPKRL 433
             Q SGLGGA+GYGNTVEINFCVSCS+KGTAV MKKMLETAFPGLDV+LANYPPP PKRL
Sbjct:  61 --QTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 118

Query: 434 LAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRANRFGSMASTWLIGNFLQSYL 613
           LAKVVPV QMGVIGMIVAGDR+ PMIGI +PPAWF+SLRANRFGSMASTWLIGNFLQSYL
Sbjct: 119 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 178

Query: 614 QSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISKTLTKPSMVAGS 754
           QSSGAFEV CNGE VFSKLKEGRFPGEIELRDLISKTLT+PS++ GS
Sbjct: 179 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 225

>TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PROTEIN
        PRECURSOR); selenium binding | chr3:17428685-17429555 REVERSE

          Length = 210

 Score =  287 bits (732), Expect = 1e-077
 Identities = 142/187 (75%), Positives = 160/187 (85%), Gaps = 7/187 (3%)
 Frame = +2

Query: 197 PPHIPHQQPPPV-VVPDFPSQKQASGLGGAVGYGNTVEINFCVSCSFKGTAVNMKKMLET 373
           PP   HQ PP +    DFP+QK        VGYGNTVEINFC+SCS+KGTAV+MKKMLE+
Sbjct:  28 PPKSQHQSPPSISETLDFPAQKST-----GVGYGNTVEINFCISCSYKGTAVSMKKMLES 82

Query: 374 AFPGLDVVLANYPPPPPKRLLAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRA 553
            FPGLDVVLANYP P PKR+LAKVVPVAQ+GVIG+I+ G+++FPMIGIA PPAW++SLRA
Sbjct:  83 VFPGLDVVLANYPAPAPKRILAKVVPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRA 142

Query: 554 NRFGSMASTWLIGNFLQSYLQSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISKTLTK 733
           NRFGSMASTWL+GNFLQS+LQSSGAFEV CNGELVFSKLKEGRFPGEIELRDLIS T+TK
Sbjct: 143 NRFGSMASTWLLGNFLQSFLQSSGAFEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTK 202

Query: 734 PSMVAGS 754
           P  V GS
Sbjct: 203 P-FVTGS 208


 Score =  59 bits (141), Expect = 4e-009
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +2

Query:  83 MGRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRP 190
           M ++QL+L+GLPIFL CSDLFNLFTPPPPK     P
Sbjct:   1 MDKTQLILLGLPIFLLCSDLFNLFTPPPPKSQHQSP 36

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,394,931,626
Number of Sequences: 33410
Number of Extensions: 13394931626
Number of Successful Extensions: 423922240
Number of sequences better than 0.0: 0