BLASTX 7.6.2
Query= UN26136 /QuerySize=929
(928 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |... 395 2e-110
TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |... 393 1e-109
TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PRO... 287 1e-077
>TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 229
Score = 395 bits (1014), Expect = 2e-110
Identities = 191/227 (84%), Positives = 206/227 (90%), Gaps = 4/227 (1%)
Frame = +2
Query: 83 MGRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRPNHPPHIPHQQPPPVVVP---DFPS 253
M R+QL+L+GLPIFLFCSDLFNLFTPPPPKP HRP+ PPHIPHQ P ++P DFPS
Sbjct: 1 MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60
Query: 254 QKQASGLGGAVGYGNTVEINFCVSCSFKGTAVNMKKMLETAFPGLDVVLANYPPPPPKRL 433
QK SGLGGA+GYGNTVEINFCVSCS+KGTAV MKKMLETAFPGLDV+LANYPPP PKRL
Sbjct: 61 QK-TSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 119
Query: 434 LAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRANRFGSMASTWLIGNFLQSYL 613
LAKVVPV QMGVIGMIVAGDR+ PMIGI +PPAWF+SLRANRFGSMASTWLIGNFLQSYL
Sbjct: 120 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 179
Query: 614 QSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISKTLTKPSMVAGS 754
QSSGAFEV CNGE VFSKLKEGRFPGEIELRDLISKTLT+PS++ GS
Sbjct: 180 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 226
>TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 228
Score = 393 bits (1008), Expect = 1e-109
Identities = 190/227 (83%), Positives = 205/227 (90%), Gaps = 5/227 (2%)
Frame = +2
Query: 83 MGRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRPNHPPHIPHQQPPPVVVP---DFPS 253
M R+QL+L+GLPIFLFCSDLFNLFTPPPPKP HRP+ PPHIPHQ P ++P DFPS
Sbjct: 1 MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60
Query: 254 QKQASGLGGAVGYGNTVEINFCVSCSFKGTAVNMKKMLETAFPGLDVVLANYPPPPPKRL 433
Q SGLGGA+GYGNTVEINFCVSCS+KGTAV MKKMLETAFPGLDV+LANYPPP PKRL
Sbjct: 61 --QTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 118
Query: 434 LAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRANRFGSMASTWLIGNFLQSYL 613
LAKVVPV QMGVIGMIVAGDR+ PMIGI +PPAWF+SLRANRFGSMASTWLIGNFLQSYL
Sbjct: 119 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 178
Query: 614 QSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISKTLTKPSMVAGS 754
QSSGAFEV CNGE VFSKLKEGRFPGEIELRDLISKTLT+PS++ GS
Sbjct: 179 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 225
>TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PROTEIN
PRECURSOR); selenium binding | chr3:17428685-17429555 REVERSE
Length = 210
Score = 287 bits (732), Expect = 1e-077
Identities = 142/187 (75%), Positives = 160/187 (85%), Gaps = 7/187 (3%)
Frame = +2
Query: 197 PPHIPHQQPPPV-VVPDFPSQKQASGLGGAVGYGNTVEINFCVSCSFKGTAVNMKKMLET 373
PP HQ PP + DFP+QK VGYGNTVEINFC+SCS+KGTAV+MKKMLE+
Sbjct: 28 PPKSQHQSPPSISETLDFPAQKST-----GVGYGNTVEINFCISCSYKGTAVSMKKMLES 82
Query: 374 AFPGLDVVLANYPPPPPKRLLAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRA 553
FPGLDVVLANYP P PKR+LAKVVPVAQ+GVIG+I+ G+++FPMIGIA PPAW++SLRA
Sbjct: 83 VFPGLDVVLANYPAPAPKRILAKVVPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRA 142
Query: 554 NRFGSMASTWLIGNFLQSYLQSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISKTLTK 733
NRFGSMASTWL+GNFLQS+LQSSGAFEV CNGELVFSKLKEGRFPGEIELRDLIS T+TK
Sbjct: 143 NRFGSMASTWLLGNFLQSFLQSSGAFEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTK 202
Query: 734 PSMVAGS 754
P V GS
Sbjct: 203 P-FVTGS 208
Score = 59 bits (141), Expect = 4e-009
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 83 MGRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRP 190
M ++QL+L+GLPIFL CSDLFNLFTPPPPK P
Sbjct: 1 MDKTQLILLGLPIFLLCSDLFNLFTPPPPKSQHQSP 36
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,394,931,626
Number of Sequences: 33410
Number of Extensions: 13394931626
Number of Successful Extensions: 423922240
Number of sequences better than 0.0: 0
|