BLASTX 7.6.2
Query= UN26138 /QuerySize=864
(863 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G22000.2 | Symbols: RHF2A | RHF2A (RING-H2 GRO... 362 3e-100
TAIR9_protein||AT5G22000.1 | Symbols: RHF2A | RHF2A (RING-H2 GRO... 362 3e-100
TAIR9_protein||AT5G22000.3 | Symbols: RHF2A | RHF2A (RING-H2 GRO... 362 3e-100
TAIR9_protein||AT4G14220.1 | Symbols: RHF1A | RHF1A (RING-H2 GRO... 122 3e-028
TAIR9_protein||AT4G23450.1 | Symbols: | zinc finger (C3HC4-type... 59 3e-009
TAIR9_protein||AT5G41350.1 | Symbols: | zinc finger (C3HC4-type... 57 1e-008
TAIR9_protein||AT1G14200.1 | Symbols: | zinc finger (C3HC4-type... 52 6e-007
TAIR9_protein||AT1G18780.1 | Symbols: | zinc finger (C3HC4-type... 51 7e-007
TAIR9_protein||AT4G26400.2 | Symbols: | zinc finger (C3HC4-type... 51 7e-007
TAIR9_protein||AT4G26400.1 | Symbols: | zinc finger (C3HC4-type... 51 7e-007
TAIR9_protein||AT5G10650.1 | Symbols: | zinc finger (C3HC4-type... 49 4e-006
TAIR9_protein||AT5G10650.2 | Symbols: | zinc finger (C3HC4-type... 49 4e-006
TAIR9_protein||AT5G24870.1 | Symbols: | zinc finger (C3HC4-type... 49 5e-006
TAIR9_protein||AT5G24870.2 | Symbols: | zinc finger (C3HC4-type... 49 5e-006
TAIR9_protein||AT4G31450.1 | Symbols: | zinc finger (C3HC4-type... 48 8e-006
TAIR9_protein||AT5G52140.1 | Symbols: | protein binding / zinc ... 48 8e-006
>TAIR9_protein||AT5G22000.2 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A);
protein binding / zinc ion binding | chr5:7277436-7279553 FORWARD
Length = 376
Score = 362 bits (927), Expect = 3e-100
Identities = 180/215 (83%), Positives = 190/215 (88%), Gaps = 8/215 (3%)
Frame = +3
Query: 234 TTTSSEGNMISAAAFVEGGIQEACDDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQ 413
+TT+SEG++ SAAAFVEGGIQ+ACDDACSICLE FC+SDPSTLTSCKHEYHLQCILEWCQ
Sbjct: 6 STTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65
Query: 414 RSSQCPMCWQSISLKDPTGQELLEAVVQERTLRFNPSRNATIFRHPTLGDFELQHLPAGV 593
RSSQCPMCWQSISLKDPT QELLEAV QER RFNP+RNATIFRHPTLGDFELQHLP GV
Sbjct: 66 RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125
Query: 594 DNAEIEERIIQHLAAAAAMGRARHGARREGHRSRSSSTQGGHPQFMVFS-----PPPPSP 758
DNAEIEERIIQHLAAAAAMGRARHG RREGHRSRSSS GH QFMVFS PP
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQ--GHQQFMVFSSQPNASSPPPH 183
Query: 759 PPMLSSPSQRDENDTVTNLPHNASVGEGSIQSNMQ 863
PPM SSPSQRDE+DTV+NLPHNA +GEGS QSN Q
Sbjct: 184 PPMPSSPSQRDESDTVSNLPHNA-LGEGSHQSNTQ 217
>TAIR9_protein||AT5G22000.1 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A);
protein binding / zinc ion binding | chr5:7277436-7279553 FORWARD
Length = 376
Score = 362 bits (927), Expect = 3e-100
Identities = 183/223 (82%), Positives = 192/223 (86%), Gaps = 12/223 (5%)
Frame = +3
Query: 210 EGVGGATTTTTSSEGNMISAAAFVEGGIQEACDDACSICLEPFCDSDPSTLTSCKHEYHL 389
EG G TT+SEG++ SAAAFVEGGIQ+ACDDACSICLE FC+SDPSTLTSCKHEYHL
Sbjct: 2 EGAG----ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHL 57
Query: 390 QCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVVQERTLRFNPSRNATIFRHPTLGDFE 569
QCILEWCQRSSQCPMCWQSISLKDPT QELLEAV QER RFNP+RNATIFRHPTLGDFE
Sbjct: 58 QCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFE 117
Query: 570 LQHLPAGVDNAEIEERIIQHLAAAAAMGRARHGARREGHRSRSSSTQGGHPQFMVFS--- 740
LQHLP GVDNAEIEERIIQHLAAAAAMGRARHG RREGHRSRSSS GH QFMVFS
Sbjct: 118 LQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQ--GHQQFMVFSSQP 175
Query: 741 --PPPPSPPPMLSSPSQRDENDTVTNLPHNASVGEGSIQSNMQ 863
PP PPM SSPSQRDE+DTV+NLPHNA +GEGS QSN Q
Sbjct: 176 NASSPPPHPPMPSSPSQRDESDTVSNLPHNA-LGEGSHQSNTQ 217
>TAIR9_protein||AT5G22000.3 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A);
protein binding / zinc ion binding | chr5:7277436-7279553 FORWARD
Length = 376
Score = 362 bits (927), Expect = 3e-100
Identities = 183/223 (82%), Positives = 192/223 (86%), Gaps = 12/223 (5%)
Frame = +3
Query: 210 EGVGGATTTTTSSEGNMISAAAFVEGGIQEACDDACSICLEPFCDSDPSTLTSCKHEYHL 389
EG G TT+SEG++ SAAAFVEGGIQ+ACDDACSICLE FC+SDPSTLTSCKHEYHL
Sbjct: 2 EGAG----ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHL 57
Query: 390 QCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVVQERTLRFNPSRNATIFRHPTLGDFE 569
QCILEWCQRSSQCPMCWQSISLKDPT QELLEAV QER RFNP+RNATIFRHPTLGDFE
Sbjct: 58 QCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFE 117
Query: 570 LQHLPAGVDNAEIEERIIQHLAAAAAMGRARHGARREGHRSRSSSTQGGHPQFMVFS--- 740
LQHLP GVDNAEIEERIIQHLAAAAAMGRARHG RREGHRSRSSS GH QFMVFS
Sbjct: 118 LQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQ--GHQQFMVFSSQP 175
Query: 741 --PPPPSPPPMLSSPSQRDENDTVTNLPHNASVGEGSIQSNMQ 863
PP PPM SSPSQRDE+DTV+NLPHNA +GEGS QSN Q
Sbjct: 176 NASSPPPHPPMPSSPSQRDESDTVSNLPHNA-LGEGSHQSNTQ 217
>TAIR9_protein||AT4G14220.1 | Symbols: RHF1A | RHF1A (RING-H2 GROUP F1A);
protein binding / ubiquitin-protein ligase/ zinc ion binding |
chr4:8196012-8198240 FORWARD
Length = 372
Score = 122 bits (306), Expect = 3e-028
Identities = 63/128 (49%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
Frame = +3
Query: 264 SAAAFVEGGIQEACDDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQ 443
S+A V DDACSICLEPF DPST+TSCKHEYHLQCI+EW QRS +CP+CWQ
Sbjct: 29 SSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQ 88
Query: 444 SISLKDPTGQELLEAVVQERTLRF-NPSRNATIFRHPTLGDFELQHLPAGVDNAEIEERI 620
L+DP QELL AV +ER L+ N S ++ I H + DF + + + +E+
Sbjct: 89 LFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEEEES--QFSSFDEQF 146
Query: 621 IQHLAAAA 644
++HL AA
Sbjct: 147 LRHLTEAA 154
>TAIR9_protein||AT4G23450.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:12241113-12241837 REVERSE
Length = 154
Score = 59 bits (141), Expect = 3e-009
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 309 DACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKD 461
D C ICLE + +P LT C H++HL CIL W +RS CP+C + + L +
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTE 152
>TAIR9_protein||AT5G41350.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:16542026-16543092 REVERSE
Length = 213
Score = 57 bits (136), Expect = 1e-008
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +3
Query: 261 ISAAAFVEGGIQEACDDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
+S A F+ I+E ++ C ICLE + +P + C H +HL CILEW +RS CP+C
Sbjct: 147 LSKAVFIP--IEE--EEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVC 201
>TAIR9_protein||AT1G14200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:4854532-4855071 REVERSE
Length = 180
Score = 52 bits (122), Expect = 6e-007
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 219 GGATTTTTSSEGNMISAAAFVEGGIQEACDDACSICLEPFCDSDPSTLTSCKHEYHLQCI 398
GG + + + + + V G +E +C+ICL+ + D + CKH++H +C+
Sbjct: 77 GGKQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCV 136
Query: 399 LEWCQRSSQCPMC 437
EW R + CPMC
Sbjct: 137 EEWLGRHATCPMC 149
>TAIR9_protein||AT1G18780.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6476258-6477235 REVERSE
Length = 326
Score = 51 bits (121), Expect = 7e-007
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3
Query: 306 DDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
+D C+ICLE F D C HE+ +C+LEW RS CP+C
Sbjct: 274 NDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLC 317
>TAIR9_protein||AT4G26400.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 357
Score = 51 bits (121), Expect = 7e-007
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 315 CSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVV 494
CSICL+ F + CKH++H++CI+ W + S CP+C + D T ++
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDET--KVNPVRP 298
Query: 495 QERTLRFNPS 524
+ RTL N S
Sbjct: 299 RTRTLEINVS 308
>TAIR9_protein||AT4G26400.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 357
Score = 51 bits (121), Expect = 7e-007
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 315 CSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVV 494
CSICL+ F + CKH++H++CI+ W + S CP+C + D T ++
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDET--KVNPVRP 298
Query: 495 QERTLRFNPS 524
+ RTL N S
Sbjct: 299 RTRTLEINVS 308
>TAIR9_protein||AT5G10650.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:3365237-3367263 REVERSE
Length = 526
Score = 49 bits (115), Expect = 4e-006
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 306 DDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
D CSIC E + D D C+H YH+ C+ +W + + CP+C
Sbjct: 472 DIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPIC 515
>TAIR9_protein||AT5G10650.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:3365237-3367263 REVERSE
Length = 526
Score = 49 bits (115), Expect = 4e-006
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 306 DDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
D CSIC E + D D C+H YH+ C+ +W + + CP+C
Sbjct: 472 DIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPIC 515
>TAIR9_protein||AT5G24870.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:8545008-8546923 REVERSE
Length = 521
Score = 49 bits (114), Expect = 5e-006
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 306 DDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
D CSIC E + D D C+H+YH+ C +W + + CP+C
Sbjct: 465 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPIC 508
>TAIR9_protein||AT5G24870.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:8545008-8546923 REVERSE
Length = 521
Score = 49 bits (114), Expect = 5e-006
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 306 DDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
D CSIC E + D D C+H+YH+ C +W + + CP+C
Sbjct: 465 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPIC 508
>TAIR9_protein||AT4G31450.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:15255955-15257977 REVERSE
Length = 498
Score = 48 bits (112), Expect = 8e-006
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 306 DDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
D CSIC E + D C+H YH++C+ EW + S CP+C
Sbjct: 445 DAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPIC 488
>TAIR9_protein||AT5G52140.1 | Symbols: | protein binding / zinc ion binding |
chr5:21184566-21186872 REVERSE
Length = 281
Score = 48 bits (112), Expect = 8e-006
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 300 ACDDACSICLEPFCDSDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 437
A D CSICL + D T CKH YH CI +W +++ C +C
Sbjct: 229 ADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCIC 274
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,394,931,626
Number of Sequences: 33410
Number of Extensions: 13394931626
Number of Successful Extensions: 423922240
Number of sequences better than 0.0: 0
|
