BLASTX 7.6.2
Query= UN26153 /QuerySize=958
(957 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT... 429 3e-118
gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidop... 422 5e-116
gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabido... 419 4e-115
gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabid... 413 3e-113
gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein... 356 5e-096
gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vini... 353 3e-095
gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, puta... 353 3e-095
gi|224101737|ref|XP_002312401.1| predicted protein [Populus tric... 344 2e-092
gi|255627797|gb|ACU14243.1| unknown [Glycine max] 341 2e-091
gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal prote... 332 8e-089
gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach ... 327 3e-087
gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis] 316 5e-084
gi|226532984|ref|NP_001141277.1| hypothetical protein LOC1002733... 314 2e-083
gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT... 305 6e-081
gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare ... 302 7e-080
gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japo... 300 2e-079
gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT... 263 3e-068
gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrel... 261 1e-067
gi|168004768|ref|XP_001755083.1| predicted protein [Physcomitrel... 259 5e-067
gi|302821306|ref|XP_002992316.1| hypothetical protein SELMODRAFT... 259 5e-067
>gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358
[Arabidopsis lyrata subsp. lyrata]
Length = 275
Score = 429 bits (1103), Expect = 3e-118
Identities = 227/279 (81%), Positives = 244/279 (87%), Gaps = 11/279 (3%)
Frame = -1
Query: 927 MAVPLSISTNLPISRQCHRPCFPSTSFKGNVSVLLGANPRQILSLKLHHKRRT------- 769
MA PLSIS+N S +C+R FPSTSFKGNVSV LGANP QILSLKL+ K +T
Sbjct: 1 MATPLSISSNPLTSHRCYRLHFPSTSFKGNVSV-LGANPSQILSLKLNQKLKTRKQQQSA 59
Query: 768 GPLVVFNQTSSSSPSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRG 589
PLVV +Q +++S +P ERFRLDNLGPQPGSRKR KRKGRGISAGQGASCGFGMRG
Sbjct: 60 RPLVVVSQAAATSEVVAP---ERFRLDNLGPQPGSRKRQKRKGRGISAGQGASCGFGMRG 116
Query: 588 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEV 409
QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVNLKDIETAGF++GDEV
Sbjct: 117 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNLKDIETAGFQEGDEV 176
Query: 408 SLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLP 229
SLETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP
Sbjct: 177 SLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLP 236
Query: 228 GRKKWVKPSVAKNLARADEYFAKKRAEAAASSSEPATSA 112
GRKKWVKPSVAKN ARADEYFAKKRA AA ++SEPA SA
Sbjct: 237 GRKKWVKPSVAKNQARADEYFAKKRAAAAEATSEPAASA 275
>gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana]
Length = 277
Score = 422 bits (1084), Expect = 5e-116
Identities = 226/280 (80%), Positives = 244/280 (87%), Gaps = 11/280 (3%)
Frame = -1
Query: 927 MAVPLSISTNLPISRQCHRPCFPSTSFKGNVSVLLGANPRQILSLKLHHKRRT------- 769
MA PLSIS+N SR C+R STSFKGNVSV LGANP QILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSV-LGANPSQILSLKLNQTLKTRNQQQFA 59
Query: 768 GPLVVFNQTSSSSPSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRG 589
PLVV +QT+++ SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRG
Sbjct: 60 RPLVVVSQTAAT--SSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRG 117
Query: 588 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEV 409
QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEV
Sbjct: 118 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEV 177
Query: 408 SLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLP 229
SLETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP
Sbjct: 178 SLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLP 237
Query: 228 GRKKWVKPSVAKNLARADEYFAKKRAEAA-ASSSEPATSA 112
GRKKWVKPSVAKN ARADEYFAKKRA AA A++SEPA SA
Sbjct: 238 GRKKWVKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 277
>gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thaliana]
Length = 277
Score = 419 bits (1076), Expect = 4e-115
Identities = 225/280 (80%), Positives = 243/280 (86%), Gaps = 11/280 (3%)
Frame = -1
Query: 927 MAVPLSISTNLPISRQCHRPCFPSTSFKGNVSVLLGANPRQILSLKLHHKRRT------- 769
MA PLSIS+N SR C+R STSFKGNVSV LGANP QILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSV-LGANPSQILSLKLNQTLKTRNQQQFA 59
Query: 768 GPLVVFNQTSSSSPSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRG 589
PLVV +QT+++ SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRG
Sbjct: 60 RPLVVVSQTAAT--SSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRG 117
Query: 588 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEV 409
QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEV
Sbjct: 118 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEV 177
Query: 408 SLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLP 229
SLETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP
Sbjct: 178 SLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLP 237
Query: 228 GRKKWVKPSVAKNLARADEYFAKKRAEAA-ASSSEPATSA 112
RKKWVKPSVAKN ARADEYFAKKRA AA A++SEPA SA
Sbjct: 238 ERKKWVKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 277
>gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabidopsis
thaliana]
Length = 273
Score = 413 bits (1060), Expect = 3e-113
Identities = 222/276 (80%), Positives = 240/276 (86%), Gaps = 11/276 (3%)
Frame = -1
Query: 915 LSISTNLPISRQCHRPCFPSTSFKGNVSVLLGANPRQILSLKLHHKRRT-------GPLV 757
LSIS+N SR C+R STSFKGNVSV LGANP QILSLKL+ +T PLV
Sbjct: 1 LSISSNPLTSRHCYRLHLSSTSFKGNVSV-LGANPSQILSLKLNQTLKTRNQQQFARPLV 59
Query: 756 VFNQTSSSSPSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSR 577
V +QT+++ SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQKSR
Sbjct: 60 VVSQTAAT--SSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSR 117
Query: 576 SGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLET 397
SGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEVSLET
Sbjct: 118 SGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLET 177
Query: 396 LKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKK 217
LK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP RKK
Sbjct: 178 LKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPERKK 237
Query: 216 WVKPSVAKNLARADEYFAKKRAEAA-ASSSEPATSA 112
WVKPSVAKN ARADEYFAKKRA AA A++SEPA SA
Sbjct: 238 WVKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 273
>gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 299
Score = 356 bits (911), Expect = 5e-096
Identities = 193/269 (71%), Positives = 220/269 (81%), Gaps = 10/269 (3%)
Frame = -1
Query: 927 MAVPLSISTNLPISRQCHRPCFPSTSFKGNVSVLLGANPRQILSLKLHHK---RRTGPLV 757
MA LS+S + P SR PS+ FKGNV L ANP Q L++KL K R++G +V
Sbjct: 38 MAALLSVS-SAPSSRTPLFLHHPSSPFKGNVR-NLKANPCQFLTIKLEVKEKVRKSGVVV 95
Query: 756 VFNQTSSSSPSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSR 577
S SP SS + RFRLDNLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQKSR
Sbjct: 96 ----ASQGSP-SSVVDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSR 150
Query: 576 SGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLET 397
SGPG+M+GFEGGQ LYRR+PKLRGIAGGM AGLPKYVPVNLKDIE AGF++G+EVSL++
Sbjct: 151 SGPGVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDS 210
Query: 396 LKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKK 217
LK KGLINPSGRER+LPLKILG G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGRKK
Sbjct: 211 LKKKGLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKK 270
Query: 216 WVKPSVAKNLARADEYFAKKRAEAAASSS 130
W+KPSV KNLARA+EYFAKKRA A +SS
Sbjct: 271 WLKPSVIKNLARAEEYFAKKRAAAEQASS 299
>gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 353 bits (905), Expect = 3e-095
Identities = 185/247 (74%), Positives = 210/247 (85%), Gaps = 9/247 (3%)
Frame = -1
Query: 861 PSTSFKGNVSVLLGANPRQILSLKLHHK---RRTGPLVVFNQTSSSSPSSSPAASERFRL 691
PS+ FKGNV L ANP Q L++KL K R++G +V S SP SS + RFRL
Sbjct: 22 PSSPFKGNVR-NLKANPCQFLTIKLEVKEKVRKSGVVV----ASQGSP-SSVVDNVRFRL 75
Query: 690 DNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPK 511
DNLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQKSRSGPG+M+GFEGGQ LYRR+PK
Sbjct: 76 DNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRIPK 135
Query: 510 LRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILG 331
LRGIAGGM AGLPKYVPVNLKDIE AGF++G+EVSL++LK KGLINPSGRER+LPLKILG
Sbjct: 136 LRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKKKGLINPSGRERRLPLKILG 195
Query: 330 TGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRA 151
G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGRKKW+KPSV KNLARA+EYFAKKRA
Sbjct: 196 AGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLKPSVIKNLARAEEYFAKKRA 255
Query: 150 EAAASSS 130
A +SS
Sbjct: 256 AAEQASS 262
>gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus
communis]
Length = 263
Score = 353 bits (904), Expect = 3e-095
Identities = 183/250 (73%), Positives = 210/250 (84%), Gaps = 3/250 (1%)
Frame = -1
Query: 864 FPSTSFKGNVSVLLGANPRQI-LSLKLHHKRRTGPLVVFNQTSSSSPSSSPAASE--RFR 694
+PS+ FKGN++ L I L+ + T LVV NQ S++ ++ +AS RFR
Sbjct: 11 YPSSHFKGNLTSLRLKTCTLIPLNFNNAKPKGTQQLVVINQARSTAAAAIQSASSGVRFR 70
Query: 693 LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLP 514
LDNLGPQ GSRKR KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+P
Sbjct: 71 LDNLGPQRGSRKRGKRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIP 130
Query: 513 KLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKIL 334
KLRGIAGGM AGLPK+VPVNLKDIE AGF++G+EVSLETLK KGLINPSGRER+LPLKIL
Sbjct: 131 KLRGIAGGMHAGLPKFVPVNLKDIEAAGFQEGEEVSLETLKEKGLINPSGRERRLPLKIL 190
Query: 333 GTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKR 154
G GELSVK+N KARAFSTSAKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYFAKK+
Sbjct: 191 GDGELSVKVNIKARAFSTSAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKK 250
Query: 153 AEAAASSSEP 124
A AAA++SEP
Sbjct: 251 AAAAAAASEP 260
>gi|224101737|ref|XP_002312401.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 344 bits (880), Expect = 2e-092
Identities = 182/250 (72%), Positives = 206/250 (82%), Gaps = 6/250 (2%)
Frame = -1
Query: 870 PCFPSTSFKGNVSVLLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSPSSSPAASERFRL 691
PC PS+ FKGN++ L L LH K + P VV NQ ++ S ++ ++ R RL
Sbjct: 11 PC-PSSPFKGNLT-RLKPKTCNFTCLTLHSKNKR-PSVVVNQAAAPSVVTT-SSGARLRL 66
Query: 690 DNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPK 511
DNLGPQPGSRK+ KRKGRGISAGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PK
Sbjct: 67 DNLGPQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPK 126
Query: 510 LRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILG 331
LRGIAGGM AGLPKYVPVNLKDI +AGF++G EVSLETLK KGLINPSGRER+LPLK+LG
Sbjct: 127 LRGIAGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRERRLPLKVLG 186
Query: 330 TGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRA 151
GELSVKLN KARAFS +AKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYFAKKR
Sbjct: 187 DGELSVKLNIKARAFSAAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKR- 245
Query: 150 EAAASSSEPA 121
AAA SEP+
Sbjct: 246 -AAAIVSEPS 254
>gi|255627797|gb|ACU14243.1| unknown [Glycine max]
Length = 256
Score = 341 bits (872), Expect = 2e-091
Identities = 183/249 (73%), Positives = 201/249 (80%), Gaps = 8/249 (3%)
Frame = -1
Query: 870 PCFPSTSFKGNVSVLLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSPSSSPAASERFRL 691
P P + FKG V L+ A P LK + R VV S SSP ++P+ RFRL
Sbjct: 13 PWRPLSPFKGTVKTLV-AKP----WLKKIQQARPLISVVNKAASLSSPVTAPSVGVRFRL 67
Query: 690 DNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPK 511
DNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PK
Sbjct: 68 DNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPK 127
Query: 510 LRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILG 331
LRGIAGGM AGLPKYV VNL+DIE A F++G+EVSLE+LK KG+INPSGRER+LPLKILG
Sbjct: 128 LRGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKILG 187
Query: 330 TGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRA 151
GELS KL KARAFSTSAKEKLE +GC+LTVLPGRKKWVKPSVAKNLARADEYFAKKRA
Sbjct: 188 EGELSKKLTLKARAFSTSAKEKLENAGCSLTVLPGRKKWVKPSVAKNLARADEYFAKKRA 247
Query: 150 EAAASSSEP 124
AA SEP
Sbjct: 248 MAA---SEP 253
>gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal protein L15,
chloroplastic; AltName: Full=CL15; Flags: Precursor
Length = 258
Score = 332 bits (849), Expect = 8e-089
Identities = 177/245 (72%), Positives = 194/245 (79%), Gaps = 3/245 (1%)
Frame = -1
Query: 858 STSFKGNVSVLLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSPSSSPAASERFRLDNLG 679
++ FKGNV L+ A P LK+ +R + V N+ +S+ S + RFRLDNLG
Sbjct: 16 ASPFKGNVKTLV-AKPCLCPCLKI--QRTKLRVSVVNKAASAYNVKSSGENVRFRLDNLG 72
Query: 678 PQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGI 499
PQPGSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGI
Sbjct: 73 PQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGI 132
Query: 498 AGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGEL 319
AGGM AGLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GEL
Sbjct: 133 AGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGEL 192
Query: 318 SVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAAA 139
S KL KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR A
Sbjct: 193 SKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRGGETA 252
Query: 138 SSSEP 124
S P
Sbjct: 253 SEPAP 257
>gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 257
Score = 327 bits (836), Expect = 3e-087
Identities = 175/245 (71%), Positives = 192/245 (78%), Gaps = 4/245 (1%)
Frame = -1
Query: 858 STSFKGNVSVLLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSPSSSPAASERFRLDNLG 679
++ FKGNV L+ A P LK+ +RT V ++S+ + + FRLDNLG
Sbjct: 16 ASPFKGNVKTLV-AKPCLCPCLKI---QRTKLRVSVVNKAASAYNVKSSGENVFRLDNLG 71
Query: 678 PQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGI 499
PQPGSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGI
Sbjct: 72 PQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGI 131
Query: 498 AGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGEL 319
AGGM AGLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GEL
Sbjct: 132 AGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGEL 191
Query: 318 SVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAAA 139
S KL KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR A
Sbjct: 192 SKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRGGETA 251
Query: 138 SSSEP 124
S P
Sbjct: 252 SEPAP 256
>gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis]
Length = 263
Score = 316 bits (808), Expect = 5e-084
Identities = 167/249 (67%), Positives = 195/249 (78%), Gaps = 11/249 (4%)
Frame = -1
Query: 870 PCFPSTSFKGNV-----SVLLGANPR-QILSLKLHHKRRTGPLVVFNQTSSSSPSSSPAA 709
PC +FKGN L + PR Q+ KL ++ + V Q ++ +S ++
Sbjct: 19 PC----AFKGNAGNVRRGSLFASFPRLQVPHTKLGLRKHI-QIGVICQAGATVTETSSSS 73
Query: 708 SERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTAL 529
RFRLDNLGPQ GSRKR KRKGRG +AGQG SCGFGMRGQKSRSGPG+ GFEGGQ L
Sbjct: 74 IGRFRLDNLGPQRGSRKRNKRKGRGHAAGQGGSCGFGMRGQKSRSGPGVRHGFEGGQMPL 133
Query: 528 YRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKL 349
YRR+PKLRGI+GGM AGLPKYVPVNL+DIE AGF+DG+EVSLE+LK KGLINPSGRER+L
Sbjct: 134 YRRIPKLRGISGGMGAGLPKYVPVNLEDIEAAGFKDGEEVSLESLKSKGLINPSGRERRL 193
Query: 348 PLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEY 169
PLKILG GEL+ KL KARAFS+SAK+KLE++GCTL LPGRKKWVKPSV K+LARADEY
Sbjct: 194 PLKILGDGELTKKLTIKARAFSSSAKQKLESNGCTLITLPGRKKWVKPSVVKHLARADEY 253
Query: 168 FAKKRAEAA 142
FA+KRAEA+
Sbjct: 254 FARKRAEAS 262
>gi|226532984|ref|NP_001141277.1| hypothetical protein LOC100273366 [Zea mays]
Length = 267
Score = 314 bits (802), Expect = 2e-083
Identities = 167/254 (65%), Positives = 194/254 (76%), Gaps = 5/254 (1%)
Frame = -1
Query: 876 HRPCFPSTSFKGNVSVLLG--ANPRQILSLKLHHKRRTGPLVVFNQTSSSSPSSSPAASE 703
H P F S+S G +L G A PR + L +R T +V + +++ S + A E
Sbjct: 17 HIPAFTSSSVVG-PGILAGRWAAPRALPLRALPPRRVT--VVCSSAAAAAEASDAAAPVE 73
Query: 702 RFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYR 523
+FRLDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG+ RGFEGGQ LYR
Sbjct: 74 KFRLDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYR 133
Query: 522 RLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPL 343
RLPKLRGIAGGM GLPKYVP NLKDI GF+DGDE+SLE+LK +GLINPSGRERKLPL
Sbjct: 134 RLPKLRGIAGGMHIGLPKYVPFNLKDIVRGGFKDGDEISLESLKSRGLINPSGRERKLPL 193
Query: 342 KILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFA 163
KILG G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+ + KN ARA+EYFA
Sbjct: 194 KILGDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLPQNYLKNQARAEEYFA 253
Query: 162 KKRAEAAASSSEPA 121
KK+A A S S A
Sbjct: 254 KKKAGAGESDSGSA 267
>gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT_01g042610
[Sorghum bicolor]
Length = 269
Score = 305 bits (781), Expect = 6e-081
Identities = 165/258 (63%), Positives = 192/258 (74%), Gaps = 5/258 (1%)
Frame = -1
Query: 894 PISRQCHRPCFPSTS-FKGNVSVLLGAN-PRQILSLKLHHKRRTGPLVVFNQTSSSSPSS 721
P + H P S+S F +L G + L L+ RR VV + ++++ +S
Sbjct: 11 PTATFLHIPASTSSSPFVAAPGILAGRRAASRALPLRARPPRRI--TVVCSAAAAAAEAS 68
Query: 720 SPAAS-ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEG 544
AA E+FRLDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG+ RGFEG
Sbjct: 69 DAAAPVEKFRLDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRRGFEG 128
Query: 543 GQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSG 364
GQ LYRRLPKLRGIAGGM GLPKYV NLKDI GF+DGDE+SLETLK +GLINPSG
Sbjct: 129 GQMPLYRRLPKLRGIAGGMHIGLPKYVAFNLKDIVRGGFKDGDEISLETLKSRGLINPSG 188
Query: 363 RERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLA 184
RERKLPLKILG G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+ + KN A
Sbjct: 189 RERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLSQNYLKNQA 248
Query: 183 RADEYFAKKRAEAAASSS 130
RA+EYFAKK+ A S S
Sbjct: 249 RAEEYFAKKKGGAGESDS 266
>gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 261
Score = 302 bits (772), Expect = 7e-080
Identities = 154/230 (66%), Positives = 178/230 (77%), Gaps = 6/230 (2%)
Frame = -1
Query: 810 RQILSLKLHHKRRTGPLVVFNQTSSSSPSSSPAASERFRLDNLGPQPGSRKRAKRKGRGI 631
R+ L L+ RR + +TS + P E+FRLDNL PQ G+R++ KRKGRGI
Sbjct: 38 RRALLLRARAPRRVTVVCSAAETSEAEP------VEKFRLDNLSPQKGARRKPKRKGRGI 91
Query: 630 SAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNL 451
SAGQGASCGFGMRGQKSRSGPG+ RGFEGGQ LYRRLPKLRGIAGGM GLPKYVP NL
Sbjct: 92 SAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRLPKLRGIAGGMHIGLPKYVPFNL 151
Query: 450 KDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAK 271
+DI GF+DGDE+SLE+LK +GLINPSGRERKLPLKILG G+LSVKLN KA AFS++AK
Sbjct: 152 RDIVQGGFKDGDEISLESLKSRGLINPSGRERKLPLKILGDGDLSVKLNIKAGAFSSAAK 211
Query: 270 EKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAAASSSEPA 121
EKLEA+GCTLTVLP RKKW+ + KN ARA+EYF+KK+ A S A
Sbjct: 212 EKLEAAGCTLTVLPKRKKWLPAAYVKNQARAEEYFSKKKGGAGESDEAAA 261
>gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japonica Group]
Length = 263
Score = 300 bits (768), Expect = 2e-079
Identities = 151/226 (66%), Positives = 178/226 (78%), Gaps = 2/226 (0%)
Frame = -1
Query: 798 SLKLHHKRRTGPLVVFNQTSSSSPSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQ 619
S+ L + R VV + ++ + + PA E+FRLDNLGPQ GSR+R KRKGRGI+AGQ
Sbjct: 40 SVVLRARPRRCVTVVCSAAAAEAAEAEPA--EKFRLDNLGPQKGSRRRPKRKGRGIAAGQ 97
Query: 618 GASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIE 439
GASCGFGMRGQKSRSGPG+ RGFEGGQ LYRR+PKLRGIAGGM GLPKYVP NL+D+
Sbjct: 98 GASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHIGLPKYVPFNLRDLA 157
Query: 438 TAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLE 259
GF+DGDE+SLE+LK +GLINPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLE
Sbjct: 158 RGGFKDGDEISLESLKSRGLINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLE 217
Query: 258 ASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAAASSSEPA 121
A+GCTL+++P RKKW+ S KN ARA+EYF+KK A S A
Sbjct: 218 AAGCTLSLVPKRKKWLPQSYLKNQARAEEYFSKKNGGAGESDEASA 263
>gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT_177574
[Selaginella moellendorffii]
Length = 258
Score = 263 bits (672), Expect = 3e-068
Identities = 135/193 (69%), Positives = 156/193 (80%), Gaps = 6/193 (3%)
Frame = -1
Query: 717 PAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQ 538
PA +RFRL NL PQPGSR + KRKGRG SAGQG SCGFGMRGQKSR+GP + GFEGGQ
Sbjct: 60 PAVLDRFRLHNLAPQPGSRHKNKRKGRGHSAGQGGSCGFGMRGQKSRAGPKVRPGFEGGQ 119
Query: 537 TALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRE 358
LYRRLPKL+GIAGGMRAG+PKYV VN++DI T F DG+EVSLETL K +INPSG+E
Sbjct: 120 MPLYRRLPKLKGIAGGMRAGVPKYVAVNIRDIAT-HFNDGEEVSLETLTSKRIINPSGKE 178
Query: 357 RKLPLKILG-TGELS----VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAK 193
+KLPLK+LG G+L KL+ KAR+FS SAK KLEA+GCTL LPGRKKWV SV+K
Sbjct: 179 KKLPLKVLGDLGDLQDSSIKKLSIKARSFSASAKVKLEAAGCTLITLPGRKKWVSASVSK 238
Query: 192 NLARADEYFAKKR 154
N+ RA+EYFAKK+
Sbjct: 239 NIKRAEEYFAKKK 251
>gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 187
Score = 261 bits (666), Expect = 1e-067
Identities = 130/188 (69%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
Frame = -1
Query: 705 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 526
+RFRL+NL PQPGSR R KRKGRGI+AGQGASCGFGMRGQKSRSG G+ GFEGGQ LY
Sbjct: 1 QRFRLNNLSPQPGSRHRQKRKGRGIAAGQGASCGFGMRGQKSRSGSGVRPGFEGGQMPLY 60
Query: 525 RRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 346
RRLPKLRGIAGGM AGLPKYV VNL DI A FE+G+EVSLE LK + ++NPSGR+RKLP
Sbjct: 61 RRLPKLRGIAGGMGAGLPKYVAVNLTDI-AASFEEGEEVSLEALKERRVLNPSGRDRKLP 119
Query: 345 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 166
LKILG GEL K+ KA A S++A+EKLE+ GC +LP +KKW+ KN +RAD YF
Sbjct: 120 LKILGDGELDFKVKVKAGAISSAAREKLESLGCEFEILPKKKKWLSAQYLKNQSRADSYF 179
Query: 165 AKKRAEAA 142
AKKR ++A
Sbjct: 180 AKKRGDSA 187
>gi|168004768|ref|XP_001755083.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 187
Score = 259 bits (661), Expect = 5e-067
Identities = 130/188 (69%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Frame = -1
Query: 705 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 526
+RFRL+NL PQPGSR R KRKGRGI+AGQGASCGFGMRGQKSRSG G+ GFEGGQ LY
Sbjct: 1 QRFRLNNLSPQPGSRHRQKRKGRGIAAGQGASCGFGMRGQKSRSGSGVRPGFEGGQMPLY 60
Query: 525 RRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 346
RRLPKLRGIAGGM AGLP YV VNL DI T F++G+EVSLE LK + ++NPSGR+RKLP
Sbjct: 61 RRLPKLRGIAGGMGAGLPNYVAVNLTDIATT-FQEGEEVSLEALKERRVLNPSGRDRKLP 119
Query: 345 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 166
LKILG GEL K+ KA A S +A+EKLE GC +LP +KKWV +KN ARA+ YF
Sbjct: 120 LKILGDGELDFKVKIKAGAVSAAAREKLETLGCEFEILPKKKKWVSVQYSKNQARAEAYF 179
Query: 165 AKKRAEAA 142
AKKR E+A
Sbjct: 180 AKKRGESA 187
>gi|302821306|ref|XP_002992316.1| hypothetical protein SELMODRAFT_135109
[Selaginella moellendorffii]
Length = 194
Score = 259 bits (661), Expect = 5e-067
Identities = 133/188 (70%), Positives = 153/188 (81%), Gaps = 6/188 (3%)
Frame = -1
Query: 702 RFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYR 523
RFRL NL PQPGSR + KRKGRG SAGQG SCGFGMRGQKSR+GP + GFEGGQ LYR
Sbjct: 1 RFRLHNLAPQPGSRHKNKRKGRGHSAGQGGSCGFGMRGQKSRAGPKVRPGFEGGQMPLYR 60
Query: 522 RLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPL 343
RLPKL+GIAGGMRAG+PKYV VN++DI T F DG+EVSLETL K +INPSG+E+KLPL
Sbjct: 61 RLPKLKGIAGGMRAGVPKYVAVNIRDIAT-HFNDGEEVSLETLTSKRIINPSGKEKKLPL 119
Query: 342 KILG-TGELS----VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARA 178
K+LG G+L KL+ KAR+FS SAK KLEA+GCTL LPGRKKWV SV+KN+ RA
Sbjct: 120 KVLGDLGDLQDSSIKKLSIKARSFSASAKVKLEAAGCTLITLPGRKKWVSASVSKNIKRA 179
Query: 177 DEYFAKKR 154
+EYFAKK+
Sbjct: 180 EEYFAKKK 187
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,162,061,699,944
Number of Sequences: 15229318
Number of Extensions: 3162061699944
Number of Successful Extensions: 736907132
Number of sequences better than 0.0: 0
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