BLASTX 7.6.2
Query= UN26245 /QuerySize=1953
(1952 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G47400.1 | Symbols: CP12-1, CP12 | CP12-1 | ch... 220 4e-057
TAIR9_protein||AT3G62410.1 | Symbols: CP12-2, CP12 | CP12-2; pro... 164 2e-040
TAIR9_protein||AT1G31330.1 | Symbols: PSAF | PSAF (photosystem I... 158 2e-038
TAIR9_protein||AT1G76560.1 | Symbols: CP12-3 | CP12-3 | chr1:287... 82 1e-015
TAIR9_protein||ATCG00210.1 | Symbols: YCF6 | hypothetical protei... 59 1e-008
>TAIR9_protein||AT2G47400.1 | Symbols: CP12-1, CP12 | CP12-1 |
chr2:19446889-19447263 FORWARD
Length = 125
Score = 220 bits (558), Expect = 4e-057
Identities = 110/125 (88%), Positives = 115/125 (92%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 TIAAAGLNVAAPRALVRPVVARLSSPVRLNYPWKFSSMNRMVMSVKATSEGGISDKVEKS 180
TIAAAGLNVA PR +VRP VAR+ PVRLNYPWKF SM RMV+ VKATSEG IS+KVEKS
Sbjct: 3 TIAAAGLNVATPRVVVRP-VARVLGPVRLNYPWKFGSMKRMVV-VKATSEGEISEKVEKS 60
Query: 181 IQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCSDNPETDECR 360
IQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYC+DNPETDECR
Sbjct: 61 IQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECR 120
Query: 361 TYDN* 375
TYDN*
Sbjct: 121 TYDN* 125
>TAIR9_protein||AT3G62410.1 | Symbols: CP12-2, CP12 | CP12-2; protein binding |
chr3:23091006-23091401 FORWARD
Length = 132
Score = 164 bits (415), Expect = 2e-040
Identities = 88/127 (69%), Positives = 95/127 (74%), Gaps = 10/127 (7%)
Frame = +1
Query: 19 LNVAAPRALV----RPVVARLSSPVRLNYPWKFSS--MNRM--VMSVKATSEGGISDKVE 174
LN+A R V RPV L+ PV LN W S NRM + +KA EGGISD VE
Sbjct: 8 LNIATQRVFVTSENRPVC--LAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGGISDVVE 65
Query: 175 KSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCSDNPETDE 354
KSI+EA+ETCA DPVSGECVAAWDEVEELSAAASHARDKKKA GSDPLEEYC DNPET+E
Sbjct: 66 KSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKDNPETNE 125
Query: 355 CRTYDN* 375
CRTYDN*
Sbjct: 126 CRTYDN* 132
>TAIR9_protein||AT1G31330.1 | Symbols: PSAF | PSAF (photosystem I subunit F) |
chr1:11215011-11215939 REVERSE
Length = 222
Score = 158 bits (397), Expect = 2e-038
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = +2
Query: 1595 DQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISDEKKPAMKEIIIDVPLASRLIFRGFI 1774
DQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAIS EKKPAMKEIIIDVPLASR+IFRGFI
Sbjct: 143 DQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFI 202
Query: 1775 WPVAAYRALINGDLIAKDV* 1834
WPVAAYR +NGDLIAKDV*
Sbjct: 203 WPVAAYREFLNGDLIAKDV* 222
>TAIR9_protein||AT1G76560.1 | Symbols: CP12-3 | CP12-3 | chr1:28728285-28728689
FORWARD
Length = 135
Score = 82 bits (200), Expect = 1e-015
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +1
Query: 148 EGGISDKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEY 327
E +S+ +E+ ++EA E C + +S EC AWDEVEE+S A + R K K DPLE +
Sbjct: 60 EEKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESF 119
Query: 328 CSDNPETDECRTYDN* 375
C +NPETDECR Y++*
Sbjct: 120 CQENPETDECRIYED* 135
>TAIR9_protein||ATCG00210.1 | Symbols: YCF6 | hypothetical protein |
chrC:28089-28178 FORWARD
Length = 30
Score = 59 bits (141), Expect = 1e-008
Identities = 28/30 (93%)
Frame = +1
Query: 1441 MDIVSLAWAGLMVVFTFSLSLVVWGRSGL* 1530
MDIVSLAWA LMVVFTFSLSLVVWGRSGL*
Sbjct: 1 MDIVSLAWAALMVVFTFSLSLVVWGRSGL* 30
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,483,733,266
Number of Sequences: 33410
Number of Extensions: 13483733266
Number of Successful Extensions: 429291895
Number of sequences better than 0.0: 0
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