BLASTX 7.6.2
Query= UN26369 /QuerySize=838
(837 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G05540.1 | Symbols: SDN2 | SDN2 (SMALL RNA DEG... 113 2e-025
TAIR9_protein||AT5G05540.2 | Symbols: SDN2 | SDN2 (SMALL RNA DEG... 113 2e-025
TAIR9_protein||AT5G67240.1 | Symbols: SDN3 | SDN3 (SMALL RNA DEG... 93 2e-019
TAIR9_protein||AT3G50100.1 | Symbols: SDN1 | SDN1 (SMALL RNA DEG... 77 9e-015
TAIR9_protein||AT3G50090.1 | Symbols: | exonuclease family prot... 77 2e-014
>TAIR9_protein||AT5G05540.1 | Symbols: SDN2 | SDN2 (SMALL RNA DEGRADING NUCLEASE
2); exonuclease/ nucleic acid binding | chr5:1636419-1638759 FORWARD
Length = 467
Score = 113 bits (281), Expect = 2e-025
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Frame = +3
Query: 93 MEHIIATRETDELVELVIAAEEKGLSGEHGTWLEFLKFCDPT--RDYFNDPRNRKAETLI 266
ME ++AT E LV+LV A++ GL GE+GTW EFL F D +DP R+ + L+
Sbjct: 1 MEDVLATAEGVVLVKLVKVAQKLGLKGENGTWKEFLDFYDKQLGSSSLSDPSKRRKDDLV 60
Query: 267 QFLTSIIKTDDSRKLALLMNPSRPLVRRYSCNHPKETAEQRLVRKTLTHEEYPFDFLIPY 446
FLT++ K +D + LA + + ++ ETAEQRLVR TLTH+EYP D+L P
Sbjct: 61 AFLTTLKKKEDLQLLAKSLKLDNDVFEKFKKKSLDETAEQRLVRMTLTHDEYPLDYLFPS 120
Query: 447 NAKDWVLTGI 476
NA+DWV TG+
Sbjct: 121 NAEDWVRTGL 130
Score = 80 bits (195), Expect = 2e-015
Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = +3
Query: 576 DMIALCCEKVLCQDNTEAAVRVAAVDRNLKVILDVLVKPNEPVINFRTSITGLDCFALHL 755
+MIA+ CE VLC+D +EA VRVAAVDR+LKVILD VKPN+PV+++RT ITGL A L
Sbjct: 141 EMIAIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLT--AQDL 198
Query: 756 SNAT-PLSDIQK 788
AT + DIQ+
Sbjct: 199 EKATISVVDIQE 210
>TAIR9_protein||AT5G05540.2 | Symbols: SDN2 | SDN2 (SMALL RNA DEGRADING NUCLEASE
2); exonuclease/ nucleic acid binding | chr5:1636419-1638256 FORWARD
Length = 353
Score = 113 bits (281), Expect = 2e-025
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Frame = +3
Query: 93 MEHIIATRETDELVELVIAAEEKGLSGEHGTWLEFLKFCDPT--RDYFNDPRNRKAETLI 266
ME ++AT E LV+LV A++ GL GE+GTW EFL F D +DP R+ + L+
Sbjct: 1 MEDVLATAEGVVLVKLVKVAQKLGLKGENGTWKEFLDFYDKQLGSSSLSDPSKRRKDDLV 60
Query: 267 QFLTSIIKTDDSRKLALLMNPSRPLVRRYSCNHPKETAEQRLVRKTLTHEEYPFDFLIPY 446
FLT++ K +D + LA + + ++ ETAEQRLVR TLTH+EYP D+L P
Sbjct: 61 AFLTTLKKKEDLQLLAKSLKLDNDVFEKFKKKSLDETAEQRLVRMTLTHDEYPLDYLFPS 120
Query: 447 NAKDWVLTGI 476
NA+DWV TG+
Sbjct: 121 NAEDWVRTGL 130
Score = 80 bits (195), Expect = 2e-015
Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = +3
Query: 576 DMIALCCEKVLCQDNTEAAVRVAAVDRNLKVILDVLVKPNEPVINFRTSITGLDCFALHL 755
+MIA+ CE VLC+D +EA VRVAAVDR+LKVILD VKPN+PV+++RT ITGL A L
Sbjct: 141 EMIAIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLT--AQDL 198
Query: 756 SNAT-PLSDIQK 788
AT + DIQ+
Sbjct: 199 EKATISVVDIQE 210
>TAIR9_protein||AT5G67240.1 | Symbols: SDN3 | SDN3 (SMALL RNA DEGRADING NUCLEASE
3); exonuclease/ nucleic acid binding | chr5:26824454-26828098 REVERSE
Length = 783
Score = 93 bits (230), Expect = 2e-019
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Frame = +3
Query: 93 MEHIIATRETDELVELVIAAEEKGLSGEHGTWLEFLKFCD-PTRDYFNDPRNRKAETLIQ 269
MEH +AT E LV+LV +++GL GE+G W EFL D +DP R + L+
Sbjct: 1 MEHKLATAEKKLLVDLVKLVQKRGLEGENGGWKEFLNVYDKKLGSSLSDPARRSNDVLVA 60
Query: 270 FLTSIIKTDDSRKLALLM--NPSRPLVRRYSCNHP-KETAEQRLVRKTLTHEEYPFDFLI 440
FL + K +D + +A +M +R L+ ++ P KET EQRLVR T+TH++YP ++
Sbjct: 61 FLLTFKKKEDLQLIARVMQCGANRELIEKFKQETPDKETPEQRLVRLTITHDDYPGNYTF 120
Query: 441 PYNAKDWVLT 470
P A+DW +T
Sbjct: 121 PSYAEDWYVT 130
Score = 74 bits (179), Expect = 1e-013
Identities = 40/79 (50%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +3
Query: 555 AKSIAITDMIALCCEKVLCQDNTEAAVRVAAVDRNLKVILDVLVKPNEPVINFRTSITGL 734
+K I T M+++ CE V C+D ++A VRV AVDR+LKV+LD VKP++PVI+++T ITG+
Sbjct: 137 SKVIKSTRMLSIDCEMVTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGV 196
Query: 735 DCFALHLSNAT-PLSDIQK 788
A L AT ++DIQK
Sbjct: 197 T--AEDLERATLSVADIQK 213
>TAIR9_protein||AT3G50100.1 | Symbols: SDN1 | SDN1 (SMALL RNA DEGRADING NUCLEASE
1); 3'-5' exonuclease/ exonuclease | chr3:18578411-18580594 FORWARD
Length = 410
Score = 77 bits (189), Expect = 9e-015
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Frame = +3
Query: 546 MPYAKSIAITDMIALCCEKVLCQDNTEAAVRVAAVDRNLKVILDVLVKPNEPVINFRTSI 725
M K + T+M+A+ CE VLC+D TE VRV VDR+LKVILD VKPN+PV+++RT I
Sbjct: 129 MKMKKVMESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDI 188
Query: 726 TGLDCFALHLSNAT-PLSDIQK 788
TG+ A + NA+ + DIQ+
Sbjct: 189 TGIT--AEDIENASLSVVDIQE 208
Score = 72 bits (174), Expect = 5e-013
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Frame = +3
Query: 93 MEHIIATRETDELVELVIAAEEKGLSGEHGTWLEFLKFCDPTRDYFNDPRNRKAETLIQF 272
ME +AT E L ELV + + L GE+G W EFL D D +DP R E L+QF
Sbjct: 1 MELKLATAEKQVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQF 60
Query: 273 LTSIIKTDDSRKLALLMNPSRPLVRRYSC-NHPKETAEQRLVRKTLTHEEYPFDFLIPYN 449
LT+ K +D + L N L+ + ++T EQ LVR T+ H Y D+
Sbjct: 61 LTTFKKKEDLQLLKCHAN--HLLIENLKQESQDEDTPEQMLVRLTVEHPSYSLDYSFKPY 118
Query: 450 AKDWVLTGI 476
++DW ++ +
Sbjct: 119 SEDWFVSDV 127
>TAIR9_protein||AT3G50090.1 | Symbols: | exonuclease family protein |
chr3:18575432-18577336 FORWARD
Length = 323
Score = 77 bits (187), Expect = 2e-014
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Frame = +3
Query: 579 MIALCCEKVLCQDNTEAAVRVAAVDRNLKVILDVLVKPNEPVINFRTSITGLDCFALHLS 758
M+AL CE VLC+D TE VRV AVDRNLKVILD VKP++PV+++RT+ITG+ A +
Sbjct: 75 MLALDCEMVLCEDGTEGVVRVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVT--AEDVQ 132
Query: 759 NAT-PLSDIQK 788
AT L DIQ+
Sbjct: 133 KATLSLVDIQE 143
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,570,464,550
Number of Sequences: 33410
Number of Extensions: 13570464550
Number of Successful Extensions: 434452889
Number of sequences better than 0.0: 0
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