BLASTX 7.6.2
Query= UN26417 /QuerySize=775
(774 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G10110.1 | Symbols: | RNA recognition motif (... 190 1e-048
TAIR9_protein||AT2G18510.1 | Symbols: emb2444 | emb2444 (embryo ... 72 3e-013
TAIR9_protein||AT3G47120.1 | Symbols: | RNA recognition motif (... 49 4e-006
TAIR9_protein||AT1G73530.1 | Symbols: | RNA recognition motif (... 48 5e-006
>TAIR9_protein||AT4G10110.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:6309606-6310809 REVERSE
Length = 174
Score = 190 bits (481), Expect = 1e-048
Identities = 94/109 (86%), Positives = 100/109 (91%), Gaps = 3/109 (2%)
Frame = -2
Query: 707 MSGNTNCTVYIGNLDERVSDRVLYDILIQAGRVTDLHIPRDKETDKPKGFAFAEYETEEI 528
MSG +NCTVYIGN+DERVSDRVLYDI+IQAGRV DLHIPRDKETDKPKGFAFAEYETEEI
Sbjct: 1 MSGTSNCTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEI 60
Query: 527 ADYAVKLFSGLVSLFNRTLKFAISGQDKAQS---GSGHRTRPHSLSFDH 390
ADYAVKLFSGLVSL+NRTLKFAISGQDK QS SGHR RP SL+F+H
Sbjct: 61 ADYAVKLFSGLVSLYNRTLKFAISGQDKLQSNSANSGHRARPQSLAFEH 109
Score = 113 bits (282), Expect = 1e-025
Identities = 57/81 (70%), Positives = 62/81 (76%), Gaps = 7/81 (8%)
Frame = -2
Query: 437 SGSGHRTRPHSLSFDH------HHSERFSSQLMSSPSPMPLDYTQEPPPPGVSNGTGLEY 276
+ SGHR RP SL+F+H HH ERFSSQL+S PSP+PLDYTQEPPPPGVSNG LEY
Sbjct: 94 ANSGHRARPQSLAFEHSDRAAYHHLERFSSQLISPPSPLPLDYTQEPPPPGVSNGASLEY 153
Query: 275 SRRVLSSALD-INPPRPGRY* 216
SRRVL SALD IN RP RY*
Sbjct: 154 SRRVLGSALDSINHSRPRRY* 174
>TAIR9_protein||AT2G18510.1 | Symbols: emb2444 | emb2444 (embryo defective
2444); RNA binding / nucleic acid binding / nucleotide binding |
chr2:8031554-8033517 REVERSE
Length = 364
Score = 72 bits (176), Expect = 3e-013
Identities = 31/89 (34%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -2
Query: 710 SMSGNTNCTVYIGNLDERVSDRVLYDILIQAGRVTDLHIPRDKETDKPKGFAFAEYETEE 531
S N + TVY+G LD ++S+ +L+++ +QAG V ++++P+D+ T+ + + F EY +EE
Sbjct: 18 SAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 530 IADYAVKLFSGLVSLFNRTLKFAISGQDK 444
ADYA+K+ + ++ L + ++ + QDK
Sbjct: 78 DADYAIKVLN-MIKLHGKPIRVNKASQDK 105
>TAIR9_protein||AT3G47120.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:17351334-17352769 REVERSE
Length = 353
Score = 49 bits (114), Expect = 4e-006
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -2
Query: 683 VYIGNLDERVSDRVLYDILIQAGRVTDLHIPRDKETDKPKGFAFAEYETEEIADYAVKLF 504
VY+G + +++ L + Q G + D+++ RDK T K KGFAF YE + AV
Sbjct: 38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 503 SGLVSLFNRTLKFAISGQDKAQSGSGHRTR 414
+G + L RT+K G K TR
Sbjct: 98 NGALVL-GRTIKVDHCGAYKKHEEEDEETR 126
>TAIR9_protein||AT1G73530.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:27643801-27645386 REVERSE
Length = 182
Score = 48 bits (113), Expect = 5e-006
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = -2
Query: 737 SSSPLFLG*SMSGNTNCTVYIGNLDERVSDRVLYDILIQAGRVTDLHIPRDKETDKPKGF 558
SSSP S S +Y+ L R ++ L D Q G + +++ DK ++PKGF
Sbjct: 65 SSSPP----SSSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGF 120
Query: 557 AFAEYETEEIADYAVKLFSG 498
AF YETEE A A++ G
Sbjct: 121 AFLRYETEEEAMKAIQGMHG 140
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,570,464,550
Number of Sequences: 33410
Number of Extensions: 13570464550
Number of Successful Extensions: 434452889
Number of sequences better than 0.0: 0
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