BLASTX 7.6.2
Query= UN26466 /QuerySize=1737
(1736 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O75400|PR40A_HUMAN Pre-mRNA-processing factor 40 homolog A OS... 218 1e-055
sp|Q9R1C7|PR40A_MOUSE Pre-mRNA-processing factor 40 homolog A OS... 217 3e-055
sp|Q80W14|PR40B_MOUSE Pre-mRNA-processing factor 40 homolog B OS... 211 2e-053
sp|Q6NWY9|PR40B_HUMAN Pre-mRNA-processing factor 40 homolog B OS... 208 1e-052
sp|O14176|PRP40_SCHPO Pre-mRNA-processing protein prp40 OS=Schiz... 168 2e-040
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho... 102 1e-020
sp|Q8CGF7|TCRG1_MOUSE Transcription elongation regulator 1 OS=Mu... 102 1e-020
sp|Q3B807|TCRGL_MOUSE Transcription elongation regulator 1-like ... 72 9e-012
>sp|O75400|PR40A_HUMAN Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens
GN=PRPF40A PE=1 SV=2
Length = 957
Score = 218 bits (554), Expect = 1e-055
Identities = 146/480 (30%), Positives = 248/480 (51%), Gaps = 25/480 (5%)
Frame = -3
Query: 1641 LASAKRSHSEPGSTSLSHIAASSSDLAVSTPVTAVVPSTSPIIPAHSSSPIPAGLAVPVT 1462
+A+A+ + + + + + AA++++ ST + V T P++P P
Sbjct: 271 MAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVSGTVPVVPE------------PEV 318
Query: 1461 RPPPATPVTPKSAATSDTEATAMKMDNLPSQGAYESKDGAPAPN-NEVDNKEMSVNGKSN 1285
AT V ++ T TE A L S A + + + N E +K+ +V +
Sbjct: 319 TSIVATVVDNENTVTISTEEQA----QLTSTPAIQDQSVEVSSNTGEETSKQETVADFTP 374
Query: 1284 MTAAGDKSNVEEPMMYATKQEAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTL 1105
+ ++ + TK+EAK AFK LL+ V S+ +WEQ K I++D RY AL L
Sbjct: 375 KKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKL 434
Query: 1104 GERKQAFNEYLGQRKKVEAEERRWRQKKAREEFVKMLEECEELSSSLKWSKALSLFENDE 925
E+KQAFN Y Q +K E EE R + K+A+E F + LE E+++S+ ++ KA +F E
Sbjct: 435 SEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEME 494
Query: 924 RFKAVDRPRDREDLFDNYIVELERKEREKAVAEHRQKMAEYRKFLETCDYIKASTQWRKI 745
+ A+ RDR +++++ + L +KE+E+A ++ + L+ + ST W +
Sbjct: 495 VWNAISE-RDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEA 553
Query: 744 QDRLED------DERSASLEKIDRLIGFEDYINDLEKEEEELKRVEKEHVRRAERKNRDA 583
Q L D DE +++K D LI FE++I LEKEEEE K+ RR +RKNR++
Sbjct: 554 QQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRES 613
Query: 582 FRTLLEEHVAAGILTAKTYWLEYCIEVRDLPQYQAVASNLSGSTPKDLFEDITEELEKQY 403
F+ L+E G L + + W+E + ++ + GST DLF+ E+L+ +Y
Sbjct: 614 FQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQ-PGSTALDLFKFYVEDLKARY 672
Query: 402 HEDKSRVKDAMKSRKVSMVASWMFEDFQSALSEDLSSQPISDINLKLIYNDLVERMKEKE 223
H++K +KD +K + + + FEDF + +S S + N+KL +N L+E+ + +E
Sbjct: 673 HDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEARE 732
>sp|Q9R1C7|PR40A_MOUSE Pre-mRNA-processing factor 40 homolog A OS=Mus musculus
GN=Prpf40a PE=1 SV=1
Length = 953
Score = 217 bits (551), Expect = 3e-055
Identities = 147/486 (30%), Positives = 250/486 (51%), Gaps = 13/486 (2%)
Frame = -3
Query: 1656 REQAELASAKRSHSEPGSTSLSHIAASSSDLAVSTPVTAVVPSTSPIIPAHSSSPIPAGL 1477
+E+ AS + T++S +AA+ + AV V A + + S++P
Sbjct: 248 QEECTTASTAPVPTTEIPTTMSTMAAAEAAAAV---VAAAAAAAAAANANTSTTPTNTVG 304
Query: 1476 AVPVTRPPPATPVTPKSAATSDT-EATAMKMDNLPSQGAYESKDGAPAPN-NEVDNKEMS 1303
+VPV P T + + +T + + L + A + G + N E K+ +
Sbjct: 305 SVPVAPEPEVTSIVATAVDNENTVTVSTEEQAQLANTTAIQDLSGDISSNTGEEPAKQET 364
Query: 1302 VNGKSNMTAAGDKSNVEEPMMYATKQEAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKRY 1123
V+ + + ++ + TK+EAK AFK LL+ V S+ +WEQ K I++D RY
Sbjct: 365 VSDFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY 424
Query: 1122 GALRTLGERKQAFNEYLGQRKKVEAEERRWRQKKAREEFVKMLEECEELSSSLKWSKALS 943
AL L E+KQAFN Y Q +K E EE R + K+A+E F + LE E+++S+ ++ KA
Sbjct: 425 SALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQ 484
Query: 942 LFENDERFKAVDRPRDREDLFDNYIVELERKEREKAVAEHRQKMAEYRKFLETCDYIKAS 763
+F E + A+ RDR +++++ + L +KE+E+A ++ + L+ + S
Sbjct: 485 MFGEMEVWNAISE-RDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYS 543
Query: 762 TQWRKIQDRLED------DERSASLEKIDRLIGFEDYINDLEKEEEELKRVEKEHVRRAE 601
T W + Q L D DE +++K D LI FE++I LEKEEEE K+ RR +
Sbjct: 544 TTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQ 603
Query: 600 RKNRDAFRTLLEEHVAAGILTAKTYWLEYCIEVRDLPQYQAVASNLSGSTPKDLFEDITE 421
RKNR++F+ L+E G L + + W+E + ++ + GST DLF+ E
Sbjct: 604 RKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQ-PGSTALDLFKFYVE 662
Query: 420 ELEKQYHEDKSRVKDAMKSRKVSMVASWMFEDFQSALSEDLSSQPISDINLKLIYNDLVE 241
+L+ +YH++K +KD +K + + + FEDF + +S S + N+KL +N L+E
Sbjct: 663 DLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLE 722
Query: 240 RMKEKE 223
+ + +E
Sbjct: 723 KAEARE 728
>sp|Q80W14|PR40B_MOUSE Pre-mRNA-processing factor 40 homolog B OS=Mus musculus
GN=Prpf40b PE=2 SV=2
Length = 870
Score = 211 bits (535), Expect = 2e-053
Identities = 152/525 (28%), Positives = 250/525 (47%), Gaps = 44/525 (8%)
Frame = -3
Query: 1719 YYYNKVTKESKWTIPEDLKLAREQAELASA----KRSHSEPGS----------------T 1600
YYYN K+S W P LK +AEL + K S+ G
Sbjct: 109 YYYNADDKQSVWEKPSVLK---SKAELLLSQCPWKEYKSDTGKPYYYNNQSQESRWTRPK 165
Query: 1599 SLSHIAASSSDLAVSTPVTAVVPSTSPIIPAHSSSPIPAGLAVPVTRPPPATPVTPKSAA 1420
L + A + T + + P P P P P P P + P+
Sbjct: 166 DLDDLEALVKQESAGKQQTQQLQTLQPQPPQPQPDPPP---IPPGPIPVPMALLEPEPGR 222
Query: 1419 TSDTEATAMKMDNLPSQGAYESKDGAPAPNNEVDNKEMSVNGKSNMTAAGDKSNVEEPMM 1240
+ D + ++ QG + ++G + + + K +G +
Sbjct: 223 SEDCD--VLEAAQPLEQGFLQREEGPSSSTGQHRQPQEEEEAKPEPERSG--------LS 272
Query: 1239 YATKQEAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTLGERKQAFNEYLGQRK 1060
++ +++AK AFK LL V S+ +WEQ K +V D RY AL L E+KQAFN Y QR+
Sbjct: 273 WSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQRE 332
Query: 1059 KVEAEERRWRQKKAREEFVKMLEECEELSSSLKWSKALSLFENDERFKAVDRPRDREDLF 880
K E EE R R K+A++ LE+ E ++S+ ++ +A F D AV R+R++++
Sbjct: 333 KEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTF-GDLEVWAVVPERERKEVY 391
Query: 879 DNYIVELERKEREKAVAEHRQKMAEYRKFLETCDYIKASTQWRKIQDRLED------DER 718
D+ + L +KE+E+A R+ + + L+ + T W + Q L D D++
Sbjct: 392 DDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDQQ 451
Query: 717 SASLEKIDRLIGFEDYINDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILT 538
+++K D LI FE++I LE+EEEE + + RR +RKNR+AF++ L+E G L
Sbjct: 452 LQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQSFLDELHETGQLH 511
Query: 537 AKTYWLEYCIEVRDLPQYQAVASNLSGSTPKDLFEDITEELEKQYHEDKSRVKDAMKSRK 358
+ + W+E V ++ + GSTP DLF+ EEL+ ++H++K +KD +K R
Sbjct: 512 SMSTWMELYPAVSTDVRFANMLGQ-PGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRG 570
Query: 357 VSMVASWMFEDFQSALSEDLSSQPISDINLKLIYNDLVERMKEKE 223
+ + FEDF +S D + + N+KL +N L+E+ + +E
Sbjct: 571 FCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEARE 615
>sp|Q6NWY9|PR40B_HUMAN Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens
GN=PRPF40B PE=1 SV=1
Length = 871
Score = 208 bits (529), Expect = 1e-052
Identities = 134/427 (31%), Positives = 222/427 (51%), Gaps = 23/427 (5%)
Frame = -3
Query: 1470 PVTRPPPATPV-----TPKSAATSDTEATAMKMDNLPSQGAYESKDGAPAPNNEVDNKEM 1306
P PP TPV P+ + D + ++ QG + + P+ + + ++
Sbjct: 201 PPPVPPGPTPVPTGLLEPEPGGSEDCD--VLEATQPLEQGFLQQLEEGPSSSGQHQPQQE 258
Query: 1305 SVNGKSNMTAAGDKSNVEEPMMYATKQEAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKR 1126
K +G + ++ +++AK AFK LL V S+ +WEQ K +V D R
Sbjct: 259 EEESKPEPERSG--------LSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPR 310
Query: 1125 YGALRTLGERKQAFNEYLGQRKKVEAEERRWRQKKAREEFVKMLEECEELSSSLKWSKAL 946
Y AL L E+KQAFN Y QR+K E EE R R K+A++ LE+ E ++S+ ++ +A
Sbjct: 311 YSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAE 370
Query: 945 SLFENDERFKAVDRPRDREDLFDNYIVELERKEREKAVAEHRQKMAEYRKFLETCDYIKA 766
F E + AV RDR++++D+ + L +KE+E+A R+ + + L+ +
Sbjct: 371 QTFGELEVW-AVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNF 429
Query: 765 STQWRKIQDRLED------DERSASLEKIDRLIGFEDYINDLEKEEEELKRVEKEHVRRA 604
T W + Q L D D + +++K D LI FE++I LE+EEEE + + RR
Sbjct: 430 QTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQ 489
Query: 603 ERKNRDAFRTLLEEHVAAGILTAKTYWLEYCIEVRDLPQYQAVASNLSGSTPKDLFEDIT 424
+RKNR+AF+T L+E G L + + W+E V ++ + GSTP DLF+
Sbjct: 490 QRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQ-PGSTPLDLFKFYV 548
Query: 423 EELEKQYHEDKSRVKDAMKSRKVSMVASWMFEDFQSALSEDLSSQPISDINLKLIYNDLV 244
EEL+ ++H++K +KD +K R + + FEDF +S D + + N+KL +N L+
Sbjct: 549 EELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLL 608
Query: 243 ERMKEKE 223
E+ + +E
Sbjct: 609 EKAEARE 615
>sp|O14176|PRP40_SCHPO Pre-mRNA-processing protein prp40 OS=Schizosaccharomyces
pombe GN=prp40 PE=1 SV=1
Length = 695
Score = 168 bits (423), Expect = 2e-040
Identities = 107/368 (29%), Positives = 185/368 (50%), Gaps = 15/368 (4%)
Frame = -3
Query: 1266 KSNVEEPMMYATKQEAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTLGERKQA 1087
+SN + Y T + A+ AF L+S NV WTWEQT +E+ K Y ++ RK A
Sbjct: 179 RSNDYQHENYDTYEAAERAFFKFLDSHNVNPSWTWEQTVRELCDAKGYYVMKDPWHRKCA 238
Query: 1086 FNEYLGQRKKVEAEERRWRQKKAREEFVKMLEECEELSSSLKWSKALSLFENDERFKAVD 907
F+ Y+ +++ + R K R+EF++ML+ +++ S W + F + F A
Sbjct: 239 FDAYILNYLTDQSDAEKNRVTKIRKEFIEMLKSSDKIHSYTLWRTVKNEFSSHPAFNATS 298
Query: 906 RPRDREDLFDNYIVELERKEREKAVAEHRQKMAEYRKFLETCDYIKASTQWRKIQDRLED 727
+++ LF Y +L E++ ++ + ++ L ++ + T+W Q + +
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRNMNF-EPYTRWSVAQAKFDQ 357
Query: 726 DERSAS------LEKIDRLIGFEDYINDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLE 565
D R L K+D L+ FED++ LE+E K+ +K+ R ERKNRDAFR LL+
Sbjct: 358 DPRYTRNSNMKYLSKLDALVAFEDHVKHLEREYILDKQKQKKEKHRIERKNRDAFRALLQ 417
Query: 564 EHVAAGILTAKTYWLEYCIEVRDLPQYQAVASNLSGSTPKDLFEDITEELEKQYHEDKSR 385
+ +T +T W E ++D P+Y + SGSTP DLF D +LE Y E ++
Sbjct: 418 DLRVQKKITLRTKWKELYPIIKDDPRYLNLLGQ-SGSTPLDLFWDTIVDLENMYREKRNL 476
Query: 384 VKDAMKSRKVSMVASWMFEDFQSALSEDLSSQPISDINLKLIYNDLVERMKEKEGR**R* 205
V D ++ ++S+ + + + LSE L + S+ + + ++V R+++K
Sbjct: 477 VLDCLEVLQISVDDTSNIPEIIARLSEKLKDREESEAVTEDLIEEVVNRLRDK------- 529
Query: 204 GIRKRCEE 181
I K+ EE
Sbjct: 530 AIHKKAEE 537
>sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Homo sapiens
GN=TCERG1 PE=1 SV=2
Length = 1098
Score = 102 bits (252), Expect = 1e-020
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 12/272 (4%)
Frame = -3
Query: 1389 MDNLPSQGAYESKDGAPAPNNEVDNKEMSVNGKSNMTAAGDKSNVEEPMMYATKQEAKAA 1210
M+ + ++K N ++D+ E ++ + AA +++ V P+ KQ
Sbjct: 614 MEEINEDEPVKAKKRKRDDNKDIDS-EKEAAMEAEIKAARERAIV--PLEARMKQ----- 665
Query: 1209 FKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAEERRWR 1030
FK +L V + TWE+ +IV D RY L ERKQ F++Y+ R + E E++ +
Sbjct: 666 FKDMLLERGVSAFSTWEKELHKIVFDPRY-LLLNPKERKQVFDQYVKTRAEEERREKKNK 724
Query: 1029 QKKAREEFVKMLEECEELSSSLKWSKALSLFENDERFKAVDRPRDREDLFDNYIVELERK 850
+A+E+F KM+EE + + +S+ + D RFKA+++ +DRE LF+ ++ +K
Sbjct: 725 IMQAKEDFKKMMEEA-KFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKK 783
Query: 849 EREKAVAEHRQKMAEYRKFLETCDYIKASTQWRKIQDRLEDDERSASLEKID-RLIGFED 673
E+E + + +++ + L ++ + ++W K++D++E D R +++ R F+
Sbjct: 784 EKEDSKTRGEKIKSDFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQ 842
Query: 672 YINDLEKEEEELKRVEKEHVRRAERKNRDAFR 577
YI + K + K E E R E R+ R
Sbjct: 843 YIEKIAKNLDSEKEKELERQARIEASLRERER 874
Score = 83 bits (204), Expect = 5e-015
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 9/230 (3%)
Frame = -3
Query: 1224 EAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAE 1045
+AK FK ++E T+ + + D R+ A+ + +R+ FNE++ +K E E
Sbjct: 727 QAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKE 786
Query: 1044 ERRWRQKKAREEFVKMLEECEELSSSLKWSKALSLFENDERFKAVDRPRDREDLFDNYIV 865
+ + R +K + +F ++L L S +WSK E+D R+KAVD REDLF YI
Sbjct: 787 DSKTRGEKIKSDFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIE 845
Query: 864 ELER---KEREKAVAEHRQKMAEYRKFLETCDYIKASTQWRKIQDRLEDDERSASLEKID 694
++ + E+EK + + A R+ + S Q ++I E +R +++
Sbjct: 846 KIAKNLDSEKEKELERQARIEASLREREREVQKAR-SEQTKEIDREREQHKREEAIQNFK 904
Query: 693 RLIGFEDYINDLEKEEEELKR-VEKEH-VRRAERKNRDAFRTLLEEHVAA 550
L+ D + + + +R + K+H R+ L EH+ A
Sbjct: 905 ALL--SDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEA 952
>sp|Q8CGF7|TCRG1_MOUSE Transcription elongation regulator 1 OS=Mus musculus
GN=Tcerg1 PE=1 SV=2
Length = 1100
Score = 102 bits (252), Expect = 1e-020
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 12/272 (4%)
Frame = -3
Query: 1389 MDNLPSQGAYESKDGAPAPNNEVDNKEMSVNGKSNMTAAGDKSNVEEPMMYATKQEAKAA 1210
M+ + ++K N ++D+ E ++ + AA +++ V P+ KQ
Sbjct: 616 MEEMNEDEPIKAKKRKRDDNKDIDS-EKEAAMEAEIKAARERAIV--PLEARMKQ----- 667
Query: 1209 FKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAEERRWR 1030
FK +L V + TWE+ +IV D RY L ERKQ F++Y+ R + E E++ +
Sbjct: 668 FKDMLLERGVSAFSTWEKELHKIVFDPRY-LLLNPKERKQVFDQYVKTRAEEERREKKNK 726
Query: 1029 QKKAREEFVKMLEECEELSSSLKWSKALSLFENDERFKAVDRPRDREDLFDNYIVELERK 850
+A+E+F KM+EE + + +S+ + D RFKA+++ +DRE LF+ ++ +K
Sbjct: 727 IMQAKEDFKKMMEEA-KFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKK 785
Query: 849 EREKAVAEHRQKMAEYRKFLETCDYIKASTQWRKIQDRLEDDERSASLEKID-RLIGFED 673
E+E + + +++ + L ++ + ++W K++D++E D R +++ R F+
Sbjct: 786 EKEDSKTRGEKIKSDFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQ 844
Query: 672 YINDLEKEEEELKRVEKEHVRRAERKNRDAFR 577
YI + K + K E E R E R+ R
Sbjct: 845 YIEKIAKNLDSEKEKELERQARIEASLRERER 876
Score = 83 bits (204), Expect = 5e-015
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 9/230 (3%)
Frame = -3
Query: 1224 EAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAE 1045
+AK FK ++E T+ + + D R+ A+ + +R+ FNE++ +K E E
Sbjct: 729 QAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKE 788
Query: 1044 ERRWRQKKAREEFVKMLEECEELSSSLKWSKALSLFENDERFKAVDRPRDREDLFDNYIV 865
+ + R +K + +F ++L L S +WSK E+D R+KAVD REDLF YI
Sbjct: 789 DSKTRGEKIKSDFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIE 847
Query: 864 ELER---KEREKAVAEHRQKMAEYRKFLETCDYIKASTQWRKIQDRLEDDERSASLEKID 694
++ + E+EK + + A R+ + S Q ++I E +R +++
Sbjct: 848 KIAKNLDSEKEKELERQARIEASLREREREVQKAR-SEQTKEIDREREQHKREEAIQNFK 906
Query: 693 RLIGFEDYINDLEKEEEELKR-VEKEH-VRRAERKNRDAFRTLLEEHVAA 550
L+ D + + + +R + K+H R+ L EH+ A
Sbjct: 907 ALL--SDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEA 954
>sp|Q3B807|TCRGL_MOUSE Transcription elongation regulator 1-like protein OS=Mus
musculus GN=Tcerg1l PE=2 SV=3
Length = 590
Score = 72 bits (176), Expect = 9e-012
Identities = 43/136 (31%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Frame = -3
Query: 1248 PMMYATKQEAKAAFKSLLESVNVQSDWTWEQTTKEIVHDKRYGALRTLGERKQAFNEYLG 1069
P + +E F+ +L V + TWE+ +IV D RY L + ERKQ F +++
Sbjct: 448 PQILLPLEERVTHFRDMLLERGVSAFSTWEKELHKIVFDPRYLLLNS-EERKQIFEQFVK 506
Query: 1068 QRKKVEAEERRWRQKKAREEFVKMLEECEELSSSLKWSKALSLFENDERFKAVDRPRDRE 889
R K E +ER+ + A+EEF K+LEE ++S + + D+RF+ V + +D+E
Sbjct: 507 TRIKEEYKERKSKLLLAKEEFKKLLEE-SKVSPRTTFKEFAEKHGRDQRFRLVQKRKDQE 565
Query: 888 DLFDNYIVELERKERE 841
F+ +I+ L+++++E
Sbjct: 566 HFFNQFILILKKRDKE 581
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,753,696,895
Number of Sequences: 518415
Number of Extensions: 109753696895
Number of Successful Extensions: 688305551
Number of sequences better than 0.0: 0
|
