BLASTX 7.6.2
Query= UN26623 /QuerySize=1195
(1194 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 317 9e-087
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 309 3e-084
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 57 2e-008
TAIR9_protein||AT3G18810.1 | Symbols: | protein kinase family p... 57 2e-008
TAIR9_protein||AT1G65440.1 | Symbols: GTB1 | GTB1; RNA binding /... 54 1e-007
TAIR9_protein||AT3G20470.1 | Symbols: GRP-5, ATGRP-5, GRP5, ATGR... 49 4e-006
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 317 bits (812), Expect = 9e-087
Identities = 172/203 (84%), Positives = 173/203 (85%), Gaps = 18/203 (8%)
Frame = -1
Query: 1194 SSFFSSVTRNLWGNNGGLNYNNNNNNNSNSNTYMGGGGSTSGNNTLSGPFG----NWGAP 1027
SSFFSSVTRNLWGNNGGLNY NNNN NSNSNTYM GGS+SGNNTLSGPFG NWGAP
Sbjct: 308 SSFFSSVTRNLWGNNGGLNY-NNNNTNSNSNTYM--GGSSSGNNTLSGPFGNSGVNWGAP 364
Query: 1026 GGGGNNAVVGSNENVKFGYGGNGESGFGLGTGGYAARNIGPPSKAAAAPSSSSFSSASAA 847
GGGNNAV SNENVKFGYGGNGESGFGLGTGGYAARN P AAP SSSFSSASA
Sbjct: 365 -GGGNNAV--SNENVKFGYGGNGESGFGLGTGGYAARN---PGANKAAP-SSSFSSASAT 417
Query: 846 NNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASFSYGIGGAGGGGPSSDVSGRSS 667
NN GYD AGLAEFYGNGAVYSDPTWRSPTPETEGPA FSYGI GGG PSSDVS RSS
Sbjct: 418 NNT-GYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGI---GGGVPSSDVSARSS 473
Query: 666 SPGYVGSYSVNKRQPNRGEPSR* 598
SPGYVGSYSVNKRQPNRGEPSR*
Sbjct: 474 SPGYVGSYSVNKRQPNRGEPSR* 496
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 309 bits (790), Expect = 3e-084
Identities = 168/198 (84%), Positives = 169/198 (85%), Gaps = 18/198 (9%)
Frame = -1
Query: 1194 SSFFSSVTRNLWGNNGGLNYNNNNNNNSNSNTYMGGGGSTSGNNTLSGPFG----NWGAP 1027
SSFFSSVTRNLWGNNGGLNY NNNN NSNSNTYM GGS+SGNNTLSGPFG NWGAP
Sbjct: 308 SSFFSSVTRNLWGNNGGLNY-NNNNTNSNSNTYM--GGSSSGNNTLSGPFGNSGVNWGAP 364
Query: 1026 GGGGNNAVVGSNENVKFGYGGNGESGFGLGTGGYAARNIGPPSKAAAAPSSSSFSSASAA 847
GGGNNAV SNENVKFGYGGNGESGFGLGTGGYAARN P AAP SSSFSSASA
Sbjct: 365 -GGGNNAV--SNENVKFGYGGNGESGFGLGTGGYAARN---PGANKAAP-SSSFSSASAT 417
Query: 846 NNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASFSYGIGGAGGGGPSSDVSGRSS 667
NN GYD AGLAEFYGNGAVYSDPTWRSPTPETEGPA FSYGI GGG PSSDVS RSS
Sbjct: 418 NNT-GYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGI---GGGVPSSDVSARSS 473
Query: 666 SPGYVGSYSVNKRQPNRG 613
SPGYVGSYSVNKRQPNRG
Sbjct: 474 SPGYVGSYSVNKRQPNRG 491
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 57 bits (137), Expect = 2e-008
Identities = 51/167 (30%), Positives = 65/167 (38%), Gaps = 16/167 (9%)
Frame = -1
Query: 1170 RNLWGNNGGLNYNNNNNNNSNSNTYMGGGGSTSGNNTLSGPFGNWGAPGGGGNNAVVGSN 991
R G GG Y S Y GG G G SG +G G GG G N+ G
Sbjct: 119 RTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGG----SGGYG--GGAGGYGGNSGGGYG 172
Query: 990 ENVKFGYGGNGESGFGLGTGGYAARNIGPPSKAAAAPSSSSF-----SSASAANNNIGYD 826
N GYGG+G G+G G+ G S S +++ +SA A + G
Sbjct: 173 GNAAGGYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVGDYNGSS 232
Query: 825 GAGLAEFYG--NGAVYSDPTW-RSPTPETE--GPASFSYGIGGAGGG 700
G G A YG NG D + SP + G + + GG GG
Sbjct: 233 GYGSANTYGSSNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFGG 279
>TAIR9_protein||AT3G18810.1 | Symbols: | protein kinase family protein |
chr3:6480701-6483593 REVERSE
Length = 701
Score = 57 bits (136), Expect = 2e-008
Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = -1
Query: 1158 GNNGGLNYNNNNNNNSNSNTYMGGGGSTSGNNTLSGPFG-NWGAPGGGGNNAVVGSNENV 982
GNNG N +NNNNNN N+N G + NN + G N GNN +N+N
Sbjct: 75 GNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNN 134
Query: 981 KFGYGGNGESGFGLGTGGYAARNIGPPSKAAAAPSSSSFSSASAANN 841
GG + + RN P +A A P SS S S+ NN
Sbjct: 135 NQNNGGGSNNRSPPPPSRNSDRNSPSPPRALAPPRSSGGGSNSSGNN 181
>TAIR9_protein||AT1G65440.1 | Symbols: GTB1 | GTB1; RNA binding / hydrolase,
acting on ester bonds / transcription elongation regulator |
chr1:24306945-24314327 REVERSE
Length = 1648
Score = 54 bits (129), Expect = 1e-007
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Frame = -1
Query: 1161 WGNNGGLNYNNNNNNNSNSNTYMGGGGSTSGNNTLSGPFGNWGAPGGGGNNAVVGSNENV 982
WGN+GG + + + GG GS SG N G G+WG+ GGG + G++
Sbjct: 1523 WGNSGGGGWGSESAGKKTGGGSTGGWGSESGGNKSDGA-GSWGSGSGGGGSGGWGNDSG- 1580
Query: 981 KFGYGGNGESGFGLGTGGYAARNIGPPSKAAAAPSSSSFSSASAANNNIGYDGAG 817
G + + GFG G+GG + G S + + + S S + G G G
Sbjct: 1581 --GKKSSEDGGFGSGSGG-GGSDWGNESGGKKSSADGGWGSESGGKKSDGEGGWG 1632
>TAIR9_protein||AT3G20470.1 | Symbols: GRP-5, ATGRP-5, GRP5, ATGRP5 | GRP5
(GLYCINE-RICH PROTEIN 5); structural constituent of cell wall |
chr3:7140625-7141149 REVERSE
Length = 175
Score = 49 bits (116), Expect = 4e-006
Identities = 35/102 (34%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Frame = -1
Query: 1095 MGGGGSTSGNNTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGTGGYAAR 916
+GGGG G L G G G GGG G G+GG SG GLG GG A
Sbjct: 59 LGGGGGFGGGGGLGGGAGGGGGLGGGAGGGAGG-------GFGGGAGSGGGLGGGGGAGG 111
Query: 915 NIGPPSKAAAAPSSSSFSSASAANNNI-GYDGAGLAEFYGNG 793
G A S F + A + G GAG +G G
Sbjct: 112 GFG---GGAGGGSGGGFGGGAGAGGGLGGGGGAGGGGGFGGG 150
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,747,114,682
Number of Sequences: 33410
Number of Extensions: 13747114682
Number of Successful Extensions: 444928081
Number of sequences better than 0.0: 0
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