BLASTX 7.6.2
Query= UN26648 /QuerySize=1144
(1143 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G65020.1 | Symbols: | FUNCTIONS IN: molecular... 361 6e-100
>TAIR9_protein||AT1G65020.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: NERD (InterPro:IPR011528); Has 53 Blast hits to 53 proteins
in 19 species: Archae - 0; Bacteria - 18; Metazoa - 9; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
chr1:24154523-24156511 REVERSE
Length = 320
Score = 361 bits (925), Expect = 6e-100
Identities = 179/225 (79%), Positives = 199/225 (88%), Gaps = 2/225 (0%)
Frame = -2
Query: 1073 MWVGIICALAIYKLVRLFFSNDDFSDVETSDSTALFSVAHRLEKVYGGKAYVGLRIPDAD 894
MW+ IIC L IYKLVR FF +D+FSDVETSDSTALFSVAHRLEK+YGGKAYVGLRIPDAD
Sbjct: 1 MWIEIICGLVIYKLVRRFFYDDEFSDVETSDSTALFSVAHRLEKLYGGKAYVGLRIPDAD 60
Query: 893 TSSRQDIDLVLVTNGQVEVIGVKNLHGIVTVTSDGSWVCEGGKHHHSTQAYPDPLAEVKK 714
T+SRQDID+VLVT G V VI VKNL GIVTVTSDGSWVCEGGK HH+T+ +PDPLAEVKK
Sbjct: 61 TASRQDIDVVLVTKGDVVVISVKNLSGIVTVTSDGSWVCEGGK-HHTTETFPDPLAEVKK 119
Query: 713 QASVLESYLEQRGVTLPEGSISSKVVIPNPNFRTMHAFPREVITYEEWQHLKPVSRNILS 534
QASVLESYLEQRGVTL EG++S KVVIPNP+FRT+HAFP EVITYE+WQ LKPVS++ +S
Sbjct: 120 QASVLESYLEQRGVTLLEGNVSCKVVIPNPSFRTIHAFPSEVITYEDWQQLKPVSKSKIS 179
Query: 533 GWVKGAFSSTGKEMQDSSHQKLNFVLGSAPVWDRVA*KQQDCVRG 399
GWVKGAF STGKEMQ+SSHQKLNF+LG+AP WDRV K V G
Sbjct: 180 GWVKGAF-STGKEMQESSHQKLNFILGTAPTWDRVELKSSKIVLG 223
Score = 176 bits (444), Expect = 4e-044
Identities = 88/106 (83%), Positives = 101/106 (95%)
Frame = -3
Query: 427 LKNSKIVLGEFLEFKGKEEDTSALRHIKRSKVDRISIQQTSMLGFAPTRLQVLYSYRDYR 248
LK+SKIVLGEFLEFKGK+EDT ALR+IKRSKVDR+SIQ+TSM G AP+RLQVLYSYRDYR
Sbjct: 215 LKSSKIVLGEFLEFKGKQEDTLALRNIKRSKVDRVSIQKTSMFGLAPSRLQVLYSYRDYR 274
Query: 247 SEGSSGSETKEVTVRSSTEVVFQPRDSEKIKKFKLSSILSVSLSA* 110
SEGSSG+E+KEVTVRSSTEV+FQPRDS K+KKFKLSS++S+SLSA*
Sbjct: 275 SEGSSGAESKEVTVRSSTEVLFQPRDSTKMKKFKLSSLVSISLSA* 320
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,747,114,682
Number of Sequences: 33410
Number of Extensions: 13747114682
Number of Successful Extensions: 444928081
Number of sequences better than 0.0: 0
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