BLASTX 7.6.2
Query= UN27013 /QuerySize=1565
(1564 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G33410.1 | Symbols: | heterogeneous nuclear r... 679 1e-195
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 458 6e-129
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 252 5e-067
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 252 5e-067
TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (... 233 4e-061
TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (... 233 4e-061
TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (... 233 4e-061
TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (... 228 1e-059
TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (... 228 1e-059
TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear r... 220 3e-057
TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear r... 220 3e-057
TAIR9_protein||AT1G58470.1 | Symbols: ATRBP1, RBP1 | ATRBP1 (ARA... 189 6e-048
TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear r... 136 5e-032
>TAIR9_protein||AT2G33410.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr2:14156085-14157435
FORWARD
Length = 405
Score = 679 bits (1752), Expect = 1e-195
Identities = 348/414 (84%), Positives = 362/414 (87%), Gaps = 30/414 (7%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
MESDQGKLFIGGISWDTDENLLREYF+N+GEV QVTVMREKAT RPRGFGFV+FSDPAVI
Sbjct: 1 MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGL 477
DRVLQ KHHIDNRDVDVKRAMSREEQSP G R G+FN ASR+FDSGANVRTKKIFVGGL
Sbjct: 61 DRVLQDKHHIDNRDVDVKRAMSREEQSPAG--RSGTFN-ASRNFDSGANVRTKKIFVGGL 117
Query: 478 PPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 657
PPALTSDEFRAYFE+YGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDL+G
Sbjct: 118 PPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNG 177
Query: 658 KQVEVKRALPKDANPGVAGGG----GGGRGFPGYG-------EGRVDSSSRYMPSQNAGG 804
KQVEVKRALPKDANPG+A GG GG GFPGYG EGRVD S+RYM QN G
Sbjct: 178 KQVEVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGGSGYEGRVD-SNRYMQPQNT-G 235
Query: 805 SGYPPYGGSGYGAGYGYGSNGVGYGGFGGYGNPSGAPYGNPGVTVPGAGFGSGPRSSWGG 984
SGYPPYGGSGYG GYGYGSNGVGYGGFGGYGNP+GAPYGNP +VPGAGFGSGPRSSWG
Sbjct: 236 SGYPPYGGSGYGTGYGYGSNGVGYGGFGGYGNPAGAPYGNP--SVPGAGFGSGPRSSWGA 293
Query: 985 QAPSGYGNVGYGNAAAAPWGGS-GPGSAVMGQGGASAGYGGQGYGYGGNDSSYGTPSGYG 1161
QAPSGYGNVGYGN AAPWGGS GPGSAVMGQ GASAGYG QGYGYGGNDSSYGTPS YG
Sbjct: 294 QAPSGYGNVGYGN--AAPWGGSGGPGSAVMGQAGASAGYGSQGYGYGGNDSSYGTPSAYG 351
Query: 1162 AVGGRPNSL-----GGGYADGLD---GYGNHQG-SGQAGYGGGYGSGNQALQQ* 1296
AVGGR ++ GGGYAD LD GYGNHQG +GQAGYGGGYGSG QA QQ*
Sbjct: 352 AVGGRSGNMPNNHGGGGYADALDGSGGYGNHQGNNGQAGYGGGYGSGRQAQQQ* 405
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 458 bits (1177), Expect = 6e-129
Identities = 250/413 (60%), Positives = 286/413 (69%), Gaps = 35/413 (8%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
M+SDQGKLF+GGISW+TDE+ LRE+FTNYGEVSQ VMR+K T RPRGFGFV FSDP+V+
Sbjct: 1 MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGL 477
DRVLQ KH ID R+VDVKRAMSREEQ G R G+ N SRS A +TKKIFVGGL
Sbjct: 61 DRVLQEKHSIDTREVDVKRAMSREEQQVSG--RTGNLN-TSRSSGGDAYNKTKKIFVGGL 117
Query: 478 PPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 657
PP LT +EFR YFE YGPV+D IM DQ T RPRGFGFVSFDSED+VD VLHKTFHDLSG
Sbjct: 118 PPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSG 177
Query: 658 KQVEVKRALPKDANPGVAG---GGGGGRGFPGYG------EGRVDSSSRYMPSQNAGGSG 810
KQVEVKRALPKDANPG G GGGG G+ GYG +GR+D S+R++ Q+ G+G
Sbjct: 178 KQVEVKRALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMD-SNRFLQHQSV-GNG 235
Query: 811 YPPYGGSGYGAGYGYGSNGVGYGGFGGY-----GNPSGAPYGNPGVTVPGAGFGS----G 963
P YG SGYGAGYG GSNG GYG +GGY G +GA G +PGAG+GS
Sbjct: 236 LPSYGSSGYGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVA 295
Query: 964 PRSSWGGQAPSGYGNVGYGNAAAAPWGGSGPGSAVMGQGGASAGYGGQGYGYG---GNDS 1134
PR+SW A SGYGN GYG+ AA G PG+A Q + +GY QGYGYG G+DS
Sbjct: 296 PRNSWDTPASSGYGNPGYGSGAAHS-GYGVPGAAPPTQ--SPSGYSNQGYGYGGYSGSDS 352
Query: 1135 SYGTPSGYGAVGGRPNSLG------GGYADGLDGYGNHQGSGQAGYGGGYGSG 1275
YG + YG VGGRP+ G GGY G G G+ + GYGGGY G
Sbjct: 353 GYGNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSDPSQGYGGGYNDG 405
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 252 bits (643), Expect = 5e-067
Identities = 155/413 (37%), Positives = 224/413 (54%), Gaps = 40/413 (9%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
M+SD GKLFIGGISWDT+E L+EYF+++GEV + +++++ T R RGFGFV F+DPAV
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGL 477
+ V+ KH+ID R V+ K+A+ R++Q+ S S G+ G RT+KIFVGGL
Sbjct: 61 EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGS-----PGGPGRTRKIFVGGL 115
Query: 478 PPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 657
P ++T +F+ YFE +G +D V+M D TQRPRGFGF+++DSE++V+ VL KTFH+L+G
Sbjct: 116 PSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNG 175
Query: 658 KQVEVKRALPKDANPGVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGSGYPPYGGSGY 837
K VEVKRA+PK+ +PG + G G+ YG RV++ N G+ P GY
Sbjct: 176 KMVEVKRAVPKELSPGPSRSPLGA-GY-SYGVNRVNN------LLNGYAQGFNPAAVGGY 227
Query: 838 GAGYG--YGSNGVGYGGF----GGYGNPSGAPYGNPGVTVPGAGFGSGPRSSWGGQAPSG 999
G + G G GF GYG G P G + +G G +P
Sbjct: 228 GLRMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNY-NGNVDYGRGMSPYY 286
Query: 1000 YGNVGYGNAAAAPWGGSGPGSAVMGQGGASAGYGGQ-GYGYGGNDSSYGTPSGYGAVGGR 1176
GN A GG+G G++ +G G Y N+++ + + G
Sbjct: 287 IGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSG 346
Query: 1177 PNSLGGGYAD-----GLDGYGN-----------HQGSGQAGYG---GGYGSGN 1278
N+L G + + G G GN + G+G++G+G GGY + N
Sbjct: 347 NNTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARN 399
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 252 bits (643), Expect = 5e-067
Identities = 155/413 (37%), Positives = 224/413 (54%), Gaps = 40/413 (9%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
M+SD GKLFIGGISWDT+E L+EYF+++GEV + +++++ T R RGFGFV F+DPAV
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGL 477
+ V+ KH+ID R V+ K+A+ R++Q+ S S G+ G RT+KIFVGGL
Sbjct: 61 EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGS-----PGGPGRTRKIFVGGL 115
Query: 478 PPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 657
P ++T +F+ YFE +G +D V+M D TQRPRGFGF+++DSE++V+ VL KTFH+L+G
Sbjct: 116 PSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNG 175
Query: 658 KQVEVKRALPKDANPGVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGSGYPPYGGSGY 837
K VEVKRA+PK+ +PG + G G+ YG RV++ N G+ P GY
Sbjct: 176 KMVEVKRAVPKELSPGPSRSPLGA-GY-SYGVNRVNN------LLNGYAQGFNPAAVGGY 227
Query: 838 GAGYG--YGSNGVGYGGF----GGYGNPSGAPYGNPGVTVPGAGFGSGPRSSWGGQAPSG 999
G + G G GF GYG G P G + +G G +P
Sbjct: 228 GLRMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNY-NGNVDYGRGMSPYY 286
Query: 1000 YGNVGYGNAAAAPWGGSGPGSAVMGQGGASAGYGGQ-GYGYGGNDSSYGTPSGYGAVGGR 1176
GN A GG+G G++ +G G Y N+++ + + G
Sbjct: 287 IGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSG 346
Query: 1177 PNSLGGGYAD-----GLDGYGN-----------HQGSGQAGYG---GGYGSGN 1278
N+L G + + G G GN + G+G++G+G GGY + N
Sbjct: 347 NNTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARN 399
>TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502077-22503658 REVERSE
Length = 449
Score = 233 bits (592), Expect = 4e-061
Identities = 125/261 (47%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
MESD GKLFIGGISWDTDE LR+YF+NYG+V + +MR++AT R RGFGF+ F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGL 477
+RV+ KH ID R V+ K+A+ R++Q + + S G RTKKIFVGGL
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQV---LKRHASPIHLMSPVHGGGGRTKKIFVGGL 117
Query: 478 PPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 657
P ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+L+G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 658 KQVEVKRALPKDANP----------GVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGS 807
K VEVKRA+PK+ +P GV GGG R + S G
Sbjct: 178 KLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGPVGR 237
Query: 808 GYPPYGGSGYGA--GYGYGSN 864
+ P GSG A +G G N
Sbjct: 238 RFSPVIGSGRNAVSAFGLGLN 258
>TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 233 bits (592), Expect = 4e-061
Identities = 125/261 (47%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
MESD GKLFIGGISWDTDE LR+YF+NYG+V + +MR++AT R RGFGF+ F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGL 477
+RV+ KH ID R V+ K+A+ R++Q + + S G RTKKIFVGGL
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQV---LKRHASPIHLMSPVHGGGGRTKKIFVGGL 117
Query: 478 PPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 657
P ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+L+G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 658 KQVEVKRALPKDANP----------GVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGS 807
K VEVKRA+PK+ +P GV GGG R + S G
Sbjct: 178 KLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGPVGR 237
Query: 808 GYPPYGGSGYGA--GYGYGSN 864
+ P GSG A +G G N
Sbjct: 238 RFSPVIGSGRNAVSAFGLGLN 258
>TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 233 bits (592), Expect = 4e-061
Identities = 125/261 (47%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
MESD GKLFIGGISWDTDE LR+YF+NYG+V + +MR++AT R RGFGF+ F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGL 477
+RV+ KH ID R V+ K+A+ R++Q + + S G RTKKIFVGGL
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQV---LKRHASPIHLMSPVHGGGGRTKKIFVGGL 117
Query: 478 PPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSG 657
P ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+L+G
Sbjct: 118 PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNG 177
Query: 658 KQVEVKRALPKDANP----------GVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGS 807
K VEVKRA+PK+ +P GV GGG R + S G
Sbjct: 178 KLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGPVGR 237
Query: 808 GYPPYGGSGYGA--GYGYGSN 864
+ P GSG A +G G N
Sbjct: 238 RFSPVIGSGRNAVSAFGLGLN 258
>TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445552-13447592 FORWARD
Length = 456
Score = 228 bits (579), Expect = 1e-059
Identities = 119/261 (45%), Positives = 163/261 (62%), Gaps = 11/261 (4%)
Frame = +1
Query: 124 SDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVIDR 303
SD GKLFIGGISWDTDE L+EYF YG++ + +MR++ T R RGFGF+ F+DP+V +R
Sbjct: 12 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71
Query: 304 VLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGLPP 483
V+ KH ID R V+ K+A+ R++Q + +G RTKKIFVGGLP
Sbjct: 72 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131
Query: 484 ALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSGKQ 663
++T EF+ YF+ +G ++D V+M D TQRPRGFGF++FDSE+SVD+VLHKTFH+L+GK
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191
Query: 664 VEVKRALPKDANPGVAGGGGGGRGFPGYGE--GRVDSSSRYMPSQNAGGSGYPP-YGGSG 834
VEVKRA+PK+ + GYG G V + S S N+ + +PP Y +
Sbjct: 192 VEVKRAVPKELSSTTPNRS----PLIGYGNNYGVVPNRS----SANSYFNSFPPGYNNNN 243
Query: 835 YGAGYGYGSNGVGYGGFGGYG 897
G+ + G G F +G
Sbjct: 244 LGSAGRFSPIGSGRNAFSSFG 264
>TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445265-13447592 FORWARD
Length = 453
Score = 228 bits (579), Expect = 1e-059
Identities = 119/261 (45%), Positives = 163/261 (62%), Gaps = 11/261 (4%)
Frame = +1
Query: 124 SDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVIDR 303
SD GKLFIGGISWDTDE L+EYF YG++ + +MR++ T R RGFGF+ F+DP+V +R
Sbjct: 9 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68
Query: 304 VLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFDSGANVRTKKIFVGGLPP 483
V+ KH ID R V+ K+A+ R++Q + +G RTKKIFVGGLP
Sbjct: 69 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 128
Query: 484 ALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSGKQ 663
++T EF+ YF+ +G ++D V+M D TQRPRGFGF++FDSE+SVD+VLHKTFH+L+GK
Sbjct: 129 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 188
Query: 664 VEVKRALPKDANPGVAGGGGGGRGFPGYGE--GRVDSSSRYMPSQNAGGSGYPP-YGGSG 834
VEVKRA+PK+ + GYG G V + S S N+ + +PP Y +
Sbjct: 189 VEVKRAVPKELSSTTPNRS----PLIGYGNNYGVVPNRS----SANSYFNSFPPGYNNNN 240
Query: 835 YGAGYGYGSNGVGYGGFGGYG 897
G+ + G G F +G
Sbjct: 241 LGSAGRFSPIGSGRNAFSSFG 261
>TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 220 bits (558), Expect = 3e-057
Identities = 146/404 (36%), Positives = 206/404 (50%), Gaps = 33/404 (8%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
ME + KLFIGGISW+T E+ LR+YF ++GEV + +M+++AT R RGFGFV F+DP V
Sbjct: 1 MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFD-SGANVRTKKIFVGG 474
+RV+ KH ID + V+ K+A+ R++ FN ++ S S +KKIFVGG
Sbjct: 61 ERVVLLKHIIDGKIVEAKKAVPRDDHV--------VFNKSNSSLQGSPGPSNSKKIFVGG 112
Query: 475 LPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLS 654
L ++T EF+ YF +G ++D V+M D TQRPRGFGF+S+DSE++VD VL KTFH+L+
Sbjct: 113 LASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELN 172
Query: 655 GKQVEVKRALPKDANPGVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGSGYPPYGGSG 834
GK VEVK A+PKD F +SR N G+ P SG
Sbjct: 173 GKMVEVKLAVPKDMALNTMRNQMNVNSF---------GTSRISSLLNEYTQGFSPSPISG 223
Query: 835 YGA--GYGYGSNGVGYGGFGGYGNPSGAPYG-NPGVTVPGAGFGSGPRSSWGGQAPSGY- 1002
YG Y GGF +G+ G P T +GSG +G GY
Sbjct: 224 YGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQT---QNYGSGSSGGFGRPFSPGYA 280
Query: 1003 GNVGYGNAAAAPWGGSGPGSAVMGQGGASAGYGGQGYGYGGND----SSYGTPSGYGAVG 1170
++G + G S +V+ + +G G GY N SS+ SG ++G
Sbjct: 281 ASLGRFGSQMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGMSSLG 340
Query: 1171 GRPNSLGGGYADGLDGYGNHQGSG----QAGYGGGYGSGNQALQ 1290
++ G +G G G + + GGY SG+ L+
Sbjct: 341 SIGDNWGTVARARSSYHGERGGVGLEAMRGVHVGGYSSGSSILE 384
>TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 220 bits (558), Expect = 3e-057
Identities = 146/404 (36%), Positives = 206/404 (50%), Gaps = 33/404 (8%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
ME + KLFIGGISW+T E+ LR+YF ++GEV + +M+++AT R RGFGFV F+DP V
Sbjct: 1 MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREEQSPGGGSRGGSFNGASRSFD-SGANVRTKKIFVGG 474
+RV+ KH ID + V+ K+A+ R++ FN ++ S S +KKIFVGG
Sbjct: 61 ERVVLLKHIIDGKIVEAKKAVPRDDHV--------VFNKSNSSLQGSPGPSNSKKIFVGG 112
Query: 475 LPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLS 654
L ++T EF+ YF +G ++D V+M D TQRPRGFGF+S+DSE++VD VL KTFH+L+
Sbjct: 113 LASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELN 172
Query: 655 GKQVEVKRALPKDANPGVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGSGYPPYGGSG 834
GK VEVK A+PKD F +SR N G+ P SG
Sbjct: 173 GKMVEVKLAVPKDMALNTMRNQMNVNSF---------GTSRISSLLNEYTQGFSPSPISG 223
Query: 835 YGA--GYGYGSNGVGYGGFGGYGNPSGAPYG-NPGVTVPGAGFGSGPRSSWGGQAPSGY- 1002
YG Y GGF +G+ G P T +GSG +G GY
Sbjct: 224 YGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQT---QNYGSGSSGGFGRPFSPGYA 280
Query: 1003 GNVGYGNAAAAPWGGSGPGSAVMGQGGASAGYGGQGYGYGGND----SSYGTPSGYGAVG 1170
++G + G S +V+ + +G G GY N SS+ SG ++G
Sbjct: 281 ASLGRFGSQMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGMSSLG 340
Query: 1171 GRPNSLGGGYADGLDGYGNHQGSG----QAGYGGGYGSGNQALQ 1290
++ G +G G G + + GGY SG+ L+
Sbjct: 341 SIGDNWGTVARARSSYHGERGGVGLEAMRGVHVGGYSSGSSILE 384
>TAIR9_protein||AT1G58470.1 | Symbols: ATRBP1, RBP1 | ATRBP1 (ARABIDOPSIS
THALIANA RNA-BINDING PROTEIN 1); RNA binding / single-stranded RNA
binding | chr1:21727374-21728539 FORWARD
Length = 361
Score = 189 bits (478), Expect = 6e-048
Identities = 125/334 (37%), Positives = 172/334 (51%), Gaps = 24/334 (7%)
Frame = +1
Query: 118 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGFVSFSDPAVI 297
M+ D+ KLF+GGI+ +T E L++YF+ YG V + V +EK T +PRGFGFV F++ +
Sbjct: 1 MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60
Query: 298 DRVLQTKHHIDNRDVDVKRAMSREE--QSPGG----GSRGGSFNGASRSFDS-GANVRTK 456
+ L+ H I + VDV++A+ + E Q P + NG R S G RTK
Sbjct: 61 VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120
Query: 457 KIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHK 636
KIFVGGL T +EF++YFE +G +D V+M D T RPRGFGFV++DSEDSV++V+
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180
Query: 637 TFHDLSGKQVEVKRALPKDANPGVAGGGGGGRGF-PGYGEGRVDSSSRYMPSQNAGGS-- 807
FH+LS K+VEVKRA+PK+ G+ G P Y + ++ Y+P QN G
Sbjct: 181 NFHELSDKRVEVKRAIPKE---GIQSNNGNAVNIPPSYSSFQ---ATPYVPEQNGYGMVL 234
Query: 808 GYPP----YGGSGYGAGYGYGSNGVGYGGFGGYGNPSGAP---YGNPGVTVPGAGFGSGP 966
+PP Y + Y YG + NP P Y P P G
Sbjct: 235 QFPPPVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYCAPPHPTPPPTNNLGY 294
Query: 967 RSSWGGQAPSGYGNVGYGNAAAAPWGGSGPGSAV 1068
G SG GY N A P G G+ +
Sbjct: 295 IQYMNGFDLSGTNISGY-NPLAWPVTGDAAGALI 327
>TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304106
REVERSE
Length = 372
Score = 136 bits (341), Expect = 5e-032
Identities = 106/330 (32%), Positives = 151/330 (45%), Gaps = 33/330 (10%)
Frame = +1
Query: 340 VDVKRAMSREEQSPGGGSRGGSFNGASRSFD-SGANVRTKKIFVGGLPPALTSDEFRAYF 516
V+ K+A+ R++ FN ++ S S +KKIFVGGL ++T EF+ YF
Sbjct: 15 VEAKKAVPRDDHV--------VFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYF 66
Query: 517 ESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDA 696
+G ++D V+M D TQRPRGFGF+S+DSE++VD VL KTFH+L+GK VEVK A+PKD
Sbjct: 67 AQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDM 126
Query: 697 NPGVAGGGGGGRGFPGYGEGRVDSSSRYMPSQNAGGSGYPPYGGSGYGA--GYGYGSNGV 870
F +SR N G+ P SGYG Y
Sbjct: 127 ALNTMRNQMNVNSF---------GTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVG 177
Query: 871 GYGGFGGYGNPSGAPYG-NPGVTVPGAGFGSGPRSSWGGQAPSGY-GNVGYGNAAAAPWG 1044
GGF +G+ G P T +GSG +G GY ++G + G
Sbjct: 178 NRGGFSPFGHGYGIELNFEPNQT---QNYGSGSSGGFGRPFSPGYAASLGRFGSQMESGG 234
Query: 1045 GSGPGSAVMGQGGASAGYGGQGYGYGGND----SSYGTPSGYGAVGGRPNSLGGGYADGL 1212
S +V+ + +G G GY N SS+ SG ++G ++ G
Sbjct: 235 ASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARS 294
Query: 1213 DGYGNHQGSG----QAGYGGGYGSGNQALQ 1290
+G G G + + GGY SG+ L+
Sbjct: 295 SYHGERGGVGLEAMRGVHVGGYSSGSSILE 324
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,059,897,068
Number of Sequences: 33410
Number of Extensions: 14059897068
Number of Successful Extensions: 460802954
Number of sequences better than 0.0: 0
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