BLASTX 7.6.2

Query= UN27224 /QuerySize=1020
        (1019 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|79416709|ref|NP_189020.2| nuclear RNA polymerase D2A [Arabido...     99   1e-018
gi|297835422|ref|XP_002885593.1| hypothetical protein ARALYDRAFT...     98   2e-018
gi|297830452|ref|XP_002883108.1| NRPD2a [Arabidopsis lyrata subs...     96   1e-017
gi|255548744|ref|XP_002515428.1| DNA-directed RNA polymerase sub...     74   4e-011

>gi|79416709|ref|NP_189020.2| nuclear RNA polymerase D2A [Arabidopsis thaliana]

          Length = 1172

 Score =  99 bits (245), Expect = 1e-018
 Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
 Frame = +1

Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYSDDKGACVSP--QAFRTLTYSGKMKVNF 453
           + SFD  K KD++W YATVK GEV+VEKPT +SDDK     P     + +TYS ++KVN 
Sbjct:  77 EPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDKELEFLPWHARLQNMTYSARIKVNV 136

Query: 454 DV*SVR---*ESG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLCNSTE 603
            V   +    +S   +  QD YVE+KIL  K QDI IG IPVMV+S+LC ++E
Sbjct: 137 QVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPVMVKSILCKTSE 189

>gi|297835422|ref|XP_002885593.1| hypothetical protein ARALYDRAFT_898915
        [Arabidopsis lyrata subsp. lyrata]

          Length = 505

 Score =  98 bits (242), Expect = 2e-018
 Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
 Frame = +1

Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYSDDKGACVSP--QAFRTLTYSGKMKVNF 453
           + SFD  K KD++W YATVK G+V+VEKPT +SDDK     P     + +TYS ++KVN 
Sbjct:  73 EPSFDVIKKKDNDWRYATVKFGKVTVEKPTFFSDDKELEFLPWHARLQNMTYSARIKVNV 132

Query: 454 DV---*SVR*ESG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLCNSTE 603
            V        +S   +  QDEYVE+KIL  K QDI IG IPVMV+S+LC ++E
Sbjct: 133 QVEVFIKTVVKSDKFKTGQDEYVEKKILEVKKQDILIGSIPVMVKSVLCKTSE 185

>gi|297830452|ref|XP_002883108.1| NRPD2a [Arabidopsis lyrata subsp. lyrata]

          Length = 1169

 Score =  96 bits (236), Expect = 1e-017
 Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
 Frame = +1

Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYSDDKGACVSP--QAFRTLTYSGKMKVNF 453
           + SFD  K KD +W YATVK GEV+ EKPT +SDDK     P     + +TYS ++KVN 
Sbjct:  73 EPSFDVIKKKDGDWRYATVKFGEVTFEKPTFFSDDKELEFLPWHARLQNMTYSARIKVNV 132

Query: 454 DV*SVR---*ESG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLCNSTE 603
            V   +    +S   +  QDEYVE++IL  K QDI IG IPVMV+S+LC ++E
Sbjct: 133 QVEVFKKTVVKSDKFKTGQDEYVEKEILDVKKQDILIGSIPVMVKSVLCKTSE 185

>gi|255548744|ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative
        [Ricinus communis]

          Length = 1203

 Score =  74 bits (179), Expect = 4e-011
 Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
 Frame = +1

Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYS--DDKGACVSPQAFRTLTYSGKMKVNF 453
           +  +DP+K  ++EW YA+VK G+V++EKPT +S  D+          + +TYS KMKVN 
Sbjct: 105 EPGYDPSKKGENEWRYASVKFGKVALEKPTFWSGADEHKMLPRHARLQNMTYSSKMKVNV 164

Query: 454 DV*SVR*E---SG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLC 591
            V     +   S   +  +D+YV++++L+   ++I IG +PVMV+S LC
Sbjct: 165 SVEVYTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLC 213

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,218,525,235,763
Number of Sequences: 15229318
Number of Extensions: 3218525235763
Number of Successful Extensions: 771402986
Number of sequences better than 0.0: 0