BLASTX 7.6.2
Query= UN27224 /QuerySize=1020
(1019 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G23780.1 | Symbols: NRPD2A, DRD2, NRPD2, DMS2,... 99 4e-021
TAIR9_protein||AT3G18090.1 | Symbols: NRPD2B | NRPD2b; DNA bindi... 52 4e-007
TAIR9_protein||AT3G18060.1 | Symbols: | transducin family prote... 50 3e-006
>TAIR9_protein||AT3G23780.1 | Symbols: NRPD2A, DRD2, NRPD2, DMS2, NRPE2 |
NRPD2A; DNA binding / DNA-directed RNA polymerase |
chr3:8567971-8573819 REVERSE
Length = 1173
Score = 99 bits (245), Expect = 4e-021
Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Frame = +1
Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYSDDKGACVSP--QAFRTLTYSGKMKVNF 453
+ SFD K KD++W YATVK GEV+VEKPT +SDDK P + +TYS ++KVN
Sbjct: 77 EPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDKELEFLPWHARLQNMTYSARIKVNV 136
Query: 454 DV*SVR---*ESG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLCNSTE 603
V + +S + QD YVE+KIL K QDI IG IPVMV+S+LC ++E
Sbjct: 137 QVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPVMVKSILCKTSE 189
>TAIR9_protein||AT3G18090.1 | Symbols: NRPD2B | NRPD2b; DNA binding /
DNA-directed RNA polymerase/ ribonucleoside binding |
chr3:6195323-6200204 FORWARD
Length = 1056
Score = 52 bits (124), Expect = 4e-007
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = +1
Query: 415 RTLTYSGKMKVNFDV---*SVR*ESG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSL 585
+ +TYS ++KVN V + + + QDEYVE++IL K QDI IG IPVMV+S+
Sbjct: 6 QNMTYSARIKVNAQVEVFKKIVIKHDKFKTGQDEYVEKEILDVKKQDILIGSIPVMVKSV 65
Query: 586 LCNSTE 603
LC ++E
Sbjct: 66 LCKTSE 71
>TAIR9_protein||AT3G18060.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr3:6183880-6186788 FORWARD
Length = 610
Score = 50 bits (117), Expect = 3e-006
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 595 STEDTQVTNEESVDVGNQPNDLSLAPLSP 681
S +D Q TNEES+D+GNQP DLSLAPLSP
Sbjct: 393 SYKDDQCTNEESIDIGNQPKDLSLAPLSP 421
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,190,211,266
Number of Sequences: 33410
Number of Extensions: 14190211266
Number of Successful Extensions: 460865129
Number of sequences better than 0.0: 0
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