BLASTX 7.6.2
Query= UN27224 /QuerySize=1020
(1019 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9LK40|Q9LK40_ARATH DNA-directed RNA polymerase OS=Arabidopsi... 99 7e-019
tr|B9RNV9|B9RNV9_RICCO DNA-directed RNA polymerase OS=Ricinus co... 74 3e-011
>tr|Q9LK40|Q9LK40_ARATH DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=NRPD2a PE=2 SV=1
Length = 1172
Score = 99 bits (245), Expect = 7e-019
Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Frame = +1
Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYSDDKGACVSP--QAFRTLTYSGKMKVNF 453
+ SFD K KD++W YATVK GEV+VEKPT +SDDK P + +TYS ++KVN
Sbjct: 77 EPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDKELEFLPWHARLQNMTYSARIKVNV 136
Query: 454 DV*SVR---*ESG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLCNSTE 603
V + +S + QD YVE+KIL K QDI IG IPVMV+S+LC ++E
Sbjct: 137 QVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPVMVKSILCKTSE 189
>tr|B9RNV9|B9RNV9_RICCO DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0920920 PE=3 SV=1
Length = 1203
Score = 74 bits (179), Expect = 3e-011
Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
Frame = +1
Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYS--DDKGACVSPQAFRTLTYSGKMKVNF 453
+ +DP+K ++EW YA+VK G+V++EKPT +S D+ + +TYS KMKVN
Sbjct: 105 EPGYDPSKKGENEWRYASVKFGKVALEKPTFWSGADEHKMLPRHARLQNMTYSSKMKVNV 164
Query: 454 DV*SVR*E---SG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLC 591
V + S + +D+YV++++L+ ++I IG +PVMV+S LC
Sbjct: 165 SVEVYTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLC 213
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,214,058,656,747
Number of Sequences: 11397958
Number of Extensions: 2214058656747
Number of Successful Extensions: 782165797
Number of sequences better than 0.0: 0
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