Library    |     Search    |     Batch query    |     SNP    |     SSR  

TrEMBL blast output of UN27224


BLASTX 7.6.2

Query= UN27224 /QuerySize=1020
        (1019 letters)

Database: UniProt/TrEMBL;
          11,397,958 sequences; 3,661,877,547 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

tr|Q9LK40|Q9LK40_ARATH DNA-directed RNA polymerase OS=Arabidopsi...     99   7e-019
tr|B9RNV9|B9RNV9_RICCO DNA-directed RNA polymerase OS=Ricinus co...     74   3e-011

>tr|Q9LK40|Q9LK40_ARATH DNA-directed RNA polymerase OS=Arabidopsis thaliana
        GN=NRPD2a PE=2 SV=1

          Length = 1172

 Score =  99 bits (245), Expect = 7e-019
 Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
 Frame = +1

Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYSDDKGACVSP--QAFRTLTYSGKMKVNF 453
           + SFD  K KD++W YATVK GEV+VEKPT +SDDK     P     + +TYS ++KVN 
Sbjct:  77 EPSFDVVKKKDNDWRYATVKFGEVTVEKPTFFSDDKELEFLPWHARLQNMTYSARIKVNV 136

Query: 454 DV*SVR---*ESG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLCNSTE 603
            V   +    +S   +  QD YVE+KIL  K QDI IG IPVMV+S+LC ++E
Sbjct: 137 QVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPVMVKSILCKTSE 189

>tr|B9RNV9|B9RNV9_RICCO DNA-directed RNA polymerase OS=Ricinus communis
        GN=RCOM_0920920 PE=3 SV=1

          Length = 1203

 Score =  74 bits (179), Expect = 3e-011
 Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
 Frame = +1

Query: 280 DASFDPTKNKDHEWGYATVKLGEVSVEKPTLYS--DDKGACVSPQAFRTLTYSGKMKVNF 453
           +  +DP+K  ++EW YA+VK G+V++EKPT +S  D+          + +TYS KMKVN 
Sbjct: 105 EPGYDPSKKGENEWRYASVKFGKVALEKPTFWSGADEHKMLPRHARLQNMTYSSKMKVNV 164

Query: 454 DV*SVR*E---SG*KRQVQDEYVERKILSKKMQDIPIGRIPVMVRSLLC 591
            V     +   S   +  +D+YV++++L+   ++I IG +PVMV+S LC
Sbjct: 165 SVEVYTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLC 213

  Database: UniProt/TrEMBL
    Posted date:  Sat Aug 07 14:51:12 2010
  Number of letters in database: 3,661,877,547
  Number of sequences in database:  11,397,958

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,214,058,656,747
Number of Sequences: 11397958
Number of Extensions: 2214058656747
Number of Successful Extensions: 782165797
Number of sequences better than 0.0: 0