BLASTX 7.6.2
Query= UN27337 /QuerySize=824
(823 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297793491|ref|XP_002864630.1| hypothetical protein ARALYDRAFT... 139 5e-031
gi|15238389|ref|NP_200746.1| methyl-CPG-binding domain 6 protein... 127 2e-027
gi|15232591|ref|NP_190242.1| methyl-CPG-binding domain protein 5... 115 1e-023
gi|21554707|gb|AAM63666.1| unknown [Arabidopsis thaliana] 115 1e-023
gi|297815816|ref|XP_002875791.1| hypothetical protein ARALYDRAFT... 112 8e-023
gi|255584216|ref|XP_002532846.1| DNA binding protein, putative [... 92 1e-016
gi|224106479|ref|XP_002314180.1| methyl binding domain protein [... 89 5e-016
gi|224059490|ref|XP_002299872.1| methyl binding domain protein [... 89 7e-016
gi|297746071|emb|CBI16127.3| unnamed protein product [Vitis vini... 84 2e-014
>gi|297793491|ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168
[Arabidopsis lyrata subsp. lyrata]
Length = 233
Score = 139 bits (350), Expect = 5e-031
Identities = 69/104 (66%), Positives = 83/104 (79%), Gaps = 7/104 (6%)
Frame = +2
Query: 260 KKKGSKKPDNTDSNSDNFEGQGSNKSSRKANKEQPPPPPRPPSPPLKFDFENPPEKVSWS 439
K+ G+KK +NTD SD+FEGQGSN++ RKA ++PPPPP PPL FDF+NPPEKVSWS
Sbjct: 137 KRGGTKKVENTDFLSDHFEGQGSNRARRKA--KEPPPPP----PPLDFDFKNPPEKVSWS 190
Query: 440 AAAKAGEEAWTPFVGDDKVQDSLRREWCTAFNVITTKNPTKLSS 571
AKAGEEAW P +GD KVQDS+RR+W TAF IT +NP+KLSS
Sbjct: 191 -MAKAGEEAWIPIIGDVKVQDSVRRDWSTAFTFITNRNPSKLSS 233
Score = 127 bits (317), Expect = 3e-027
Identities = 61/76 (80%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
Frame = +3
Query: 39 PYESEMSSNDTDQSRKRAAPGDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFR 218
P S +SRKRAAPGD NWLPPGWRVEDK+RTSGATAGSVDKYYYEP TGRKFR
Sbjct: 64 PSPDSSSHQAESKSRKRAAPGD-NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFR 122
Query: 219 SRTEVLYYLEHGTEKR 266
SRTEVLYYLEHGT KR
Sbjct: 123 SRTEVLYYLEHGTSKR 138
>gi|15238389|ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis
thaliana]
Length = 225
Score = 127 bits (319), Expect = 2e-027
Identities = 66/84 (78%), Positives = 69/84 (82%), Gaps = 11/84 (13%)
Frame = +3
Query: 60 SNDTDQ--------SRKRAAPGDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKF 215
+N TDQ SRKRAAPGD NWLPPGWRVEDK+RTSGATAGSVDKYYYEP TGRKF
Sbjct: 56 ANGTDQVNHQTESKSRKRAAPGD-NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKF 114
Query: 216 RSRTEVLYYLEHGTEKR--KEARN 281
RSRTEVLYYLEHGT KR K+A N
Sbjct: 115 RSRTEVLYYLEHGTSKRGTKKAEN 138
Score = 126 bits (316), Expect = 4e-027
Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 7/103 (6%)
Frame = +2
Query: 263 KKGSKKPDNTDSNSDNFEGQGSNKSSRKANKEQPPPPPRPPSPPLKFDFENPPEKVSWSA 442
K+G+KK +NT N D+FEGQGSN+ +R A PPPPP PPL FDF+NPP+KVSWS
Sbjct: 130 KRGTKKAENTYFNPDHFEGQGSNRVTRTAT--VPPPPP----PPLDFDFKNPPDKVSWS- 182
Query: 443 AAKAGEEAWTPFVGDDKVQDSLRREWCTAFNVITTKNPTKLSS 571
A AGEE W P +GD KVQDS+RR+W TAF IT++NP+K+S+
Sbjct: 183 MANAGEEGWIPNIGDVKVQDSVRRDWSTAFTFITSRNPSKVSA 225
>gi|15232591|ref|NP_190242.1| methyl-CPG-binding domain protein 5 [Arabidopsis
thaliana]
Length = 182
Score = 115 bits (286), Expect = 1e-023
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = +3
Query: 75 QSRKRAAPGDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHG 254
+SRKRA PGD+NWLPP WR E +VRTSG AG+VDK+YYEPITGRKFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 255 TEKRKEAR 278
T K+K +
Sbjct: 82 TPKKKSVK 89
Score = 95 bits (234), Expect = 1e-017
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Frame = +2
Query: 260 KKKGSKKPDNTDSNSDNFEGQGSNKSSRKANKEQPPPPPRPPSPPLKFDFENPPEKVSWS 439
KKK K +N DS+S++ EG+GS + K+NK+ PPP+ PL FDF N PEKV+W+
Sbjct: 84 KKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKVTEPPPK----PLNFDFLNVPEKVTWT 139
Query: 440 AAAKAGEEAWTPFVGDDKVQDSLRREWCTAFNVITTKNPTK 562
EEAW PF+GD K+Q+S+ ++W F ++T++N K
Sbjct: 140 -GINGSEEAWLPFIGDYKIQESVSQDWDRVFTLVTSQNAGK 179
>gi|21554707|gb|AAM63666.1| unknown [Arabidopsis thaliana]
Length = 182
Score = 115 bits (286), Expect = 1e-023
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = +3
Query: 75 QSRKRAAPGDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHG 254
+SRKRA PGD+NWLPP WR E +VRTSG AG+VDK+YYEPITGRKFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 255 TEKRKEAR 278
T K+K +
Sbjct: 82 TPKKKSVK 89
>gi|297815816|ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028
[Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 112 bits (279), Expect = 8e-023
Identities = 52/75 (69%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = +3
Query: 75 QSRKRAAPGDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHG 254
+SRKRA PGD+NWLPP WR E +VRTSG AG+VDK+YYEPITGRKFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEVRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 255 TEKR--KEARNQTTL 293
K+ K+A N +L
Sbjct: 82 APKKAVKKAENGDSL 96
Score = 96 bits (236), Expect = 8e-018
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
Frame = +2
Query: 263 KKGSKKPDNTDSNSDNFEGQGSNKSSRKANKEQPPPPPRPPSPPLKFDFENPPEKVSWSA 442
KK KK +N DS S++ EG+GS + K+NK+ PPP+ PL FDF N PEKV+W+
Sbjct: 84 KKAVKKAENGDSLSEHSEGRGSIRRQTKSNKKANEPPPK----PLNFDFLNVPEKVTWT- 138
Query: 443 AAKAGEEAWTPFVGDDKVQDSLRREWCTAFNVITTKN 553
EEAW PF+GD K+Q+S+ ++W AF ++TT+N
Sbjct: 139 GINGSEEAWLPFIGDYKIQESVSQDWGRAFTLVTTQN 175
>gi|255584216|ref|XP_002532846.1| DNA binding protein, putative [Ricinus
communis]
Length = 234
Score = 92 bits (226), Expect = 1e-016
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +3
Query: 108 NWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHGTEKR 266
NWLPPGW VED+VR SGATAG+VDKYY EP+TGR+FRS+ EV Y+LE GT+K+
Sbjct: 98 NWLPPGWLVEDRVRASGATAGTVDKYYIEPVTGRRFRSKKEVQYFLETGTKKK 150
>gi|224106479|ref|XP_002314180.1| methyl binding domain protein [Populus
trichocarpa]
Length = 214
Score = 89 bits (220), Expect = 5e-016
Identities = 38/56 (67%), Positives = 48/56 (85%)
Frame = +3
Query: 102 DNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHGTEKRK 269
+ +WLPPGW VED++RTSGATAG+VDKYY +P +GRKFRS+ +V YYLE GT K+K
Sbjct: 70 ETSWLPPGWVVEDRIRTSGATAGTVDKYYIDPASGRKFRSKKDVQYYLETGTLKKK 125
>gi|224059490|ref|XP_002299872.1| methyl binding domain protein [Populus
trichocarpa]
Length = 214
Score = 89 bits (219), Expect = 7e-016
Identities = 38/56 (67%), Positives = 48/56 (85%)
Frame = +3
Query: 102 DNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHGTEKRK 269
D +WLPPGW VED+VRTSGATAG+ DKYY EP++GR+FRS+ +V YYLE GT K++
Sbjct: 70 DTSWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYYLETGTLKKR 125
>gi|297746071|emb|CBI16127.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 84 bits (206), Expect = 2e-014
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +3
Query: 108 NWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHGTEKRKEARN 281
+WLPPGW VE +VR+SGA+AGS DKY+ EPITGR+FRS+ EV YYLE G ++K +N
Sbjct: 8 DWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKN 65
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,232,501,470,200
Number of Sequences: 15229318
Number of Extensions: 3232501470200
Number of Successful Extensions: 779975894
Number of sequences better than 0.0: 0
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