BLASTX 7.6.2
Query= UN27337 /QuerySize=824
(823 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G59380.1 | Symbols: MBD6, ATMBD6 | MBD6; DNA b... 127 7e-030
TAIR9_protein||AT3G46580.1 | Symbols: MBD05, MBD5, ATMBD5 | MBD5... 115 5e-026
>TAIR9_protein||AT5G59380.1 | Symbols: MBD6, ATMBD6 | MBD6; DNA binding / DNA
demethylase/ methyl-CpG binding | chr5:23952321-23953485 FORWARD
Length = 226
Score = 127 bits (319), Expect = 7e-030
Identities = 66/84 (78%), Positives = 69/84 (82%), Gaps = 11/84 (13%)
Frame = +3
Query: 60 SNDTDQ--------SRKRAAPGDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKF 215
+N TDQ SRKRAAPGD NWLPPGWRVEDK+RTSGATAGSVDKYYYEP TGRKF
Sbjct: 56 ANGTDQVNHQTESKSRKRAAPGD-NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKF 114
Query: 216 RSRTEVLYYLEHGTEKR--KEARN 281
RSRTEVLYYLEHGT KR K+A N
Sbjct: 115 RSRTEVLYYLEHGTSKRGTKKAEN 138
Score = 126 bits (316), Expect = 2e-029
Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 7/103 (6%)
Frame = +2
Query: 263 KKGSKKPDNTDSNSDNFEGQGSNKSSRKANKEQPPPPPRPPSPPLKFDFENPPEKVSWSA 442
K+G+KK +NT N D+FEGQGSN+ +R A PPPPP PPL FDF+NPP+KVSWS
Sbjct: 130 KRGTKKAENTYFNPDHFEGQGSNRVTRTAT--VPPPPP----PPLDFDFKNPPDKVSWS- 182
Query: 443 AAKAGEEAWTPFVGDDKVQDSLRREWCTAFNVITTKNPTKLSS 571
A AGEE W P +GD KVQDS+RR+W TAF IT++NP+K+S+
Sbjct: 183 MANAGEEGWIPNIGDVKVQDSVRRDWSTAFTFITSRNPSKVSA 225
>TAIR9_protein||AT3G46580.1 | Symbols: MBD05, MBD5, ATMBD5 | MBD5
(METHYL-CPG-BINDING DOMAIN PROTEIN 5); DNA binding / methyl-CpG binding
| chr3:17148397-17149328 FORWARD
Length = 183
Score = 115 bits (286), Expect = 5e-026
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = +3
Query: 75 QSRKRAAPGDNNWLPPGWRVEDKVRTSGATAGSVDKYYYEPITGRKFRSRTEVLYYLEHG 254
+SRKRA PGD+NWLPP WR E +VRTSG AG+VDK+YYEPITGRKFRS+ EVLYYLEHG
Sbjct: 22 KSRKRATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHG 81
Query: 255 TEKRKEAR 278
T K+K +
Sbjct: 82 TPKKKSVK 89
Score = 95 bits (234), Expect = 5e-020
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Frame = +2
Query: 260 KKKGSKKPDNTDSNSDNFEGQGSNKSSRKANKEQPPPPPRPPSPPLKFDFENPPEKVSWS 439
KKK K +N DS+S++ EG+GS + K+NK+ PPP+ PL FDF N PEKV+W+
Sbjct: 84 KKKSVKTAENGDSHSEHSEGRGSARRQTKSNKKVTEPPPK----PLNFDFLNVPEKVTWT 139
Query: 440 AAAKAGEEAWTPFVGDDKVQDSLRREWCTAFNVITTKNPTK 562
EEAW PF+GD K+Q+S+ ++W F ++T++N K
Sbjct: 140 -GINGSEEAWLPFIGDYKIQESVSQDWDRVFTLVTSQNAGK 179
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,323,408,491
Number of Sequences: 33410
Number of Extensions: 14323408491
Number of Successful Extensions: 466300904
Number of sequences better than 0.0: 0
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